RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 TMEM9BQ9NQ34 198 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 DLL3Q9NYJ7 618 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 CDV3Q9UKY7 258 aaKnown RBP15.49■□□□□ 0.07
USE1-206ENST00000595101 PLXNA2O75051 1894 aa15.48■□□□□ 0.07
USE1-206ENST00000595101 CACNA1EQ15878 2313 aa15.48■□□□□ 0.07
USE1-206ENST00000595101 TCRBV7S2A1N4TA0A589 114 aa15.48■□□□□ 0.07
USE1-206ENST00000595101 POM121BA6NF01 834 aa15.48■□□□□ 0.07
USE1-206ENST00000595101 TM4SF5O14894 197 aa15.48■□□□□ 0.07
USE1-206ENST00000595101 XPAP23025 273 aaPredicted RBP15.48■□□□□ 0.07
USE1-206ENST00000595101 NR2C2P49116 596 aa15.48■□□□□ 0.07
USE1-206ENST00000595101 FAM193AP78312 1265 aa15.48■□□□□ 0.07
USE1-206ENST00000595101 IFI35P80217 286 aaPredicted RBP15.48■□□□□ 0.07
USE1-206ENST00000595101 SETMARQ53H47 684 aaPredicted RBP15.48■□□□□ 0.07
USE1-206ENST00000595101 CFAP58Q5T655 872 aa15.48■□□□□ 0.07
USE1-206ENST00000595101 ALG1LQ6GMV1 187 aa15.48■□□□□ 0.07
USE1-206ENST00000595101 HCAR2Q8TDS4 363 aa15.48■□□□□ 0.07
USE1-206ENST00000595101 BMFQ96LC9 184 aa15.48■□□□□ 0.07
USE1-206ENST00000595101 KLF6Q99612 283 aaPredicted RBP15.48■□□□□ 0.07
USE1-206ENST00000595101 C1QTNF2Q9BXJ5 285 aa15.48■□□□□ 0.07
USE1-206ENST00000595101 GAREM1Q9H706 876 aa15.48■□□□□ 0.07
USE1-206ENST00000595101 FNDC3AQ9Y2H6 1198 aaKnown RBP15.48■□□□□ 0.07
USE1-206ENST00000595101 RAI2Q9Y5P3 530 aa15.48■□□□□ 0.07
USE1-206ENST00000595101 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.47■□□□□ 0.07
USE1-206ENST00000595101 F5H423 210 aaPredicted RBP15.47■□□□□ 0.07
USE1-206ENST00000595101 PPP1R12AO14974 1030 aaPredicted RBP15.47■□□□□ 0.07
USE1-206ENST00000595101 FOXD2O60548 495 aaPredicted RBP15.47■□□□□ 0.07
USE1-206ENST00000595101 SYPP08247 313 aa15.47■□□□□ 0.07
USE1-206ENST00000595101 PTPN3P26045 913 aa15.47■□□□□ 0.07
USE1-206ENST00000595101 MMP12P39900 470 aa15.47■□□□□ 0.07
USE1-206ENST00000595101 ID4P47928 161 aa15.47■□□□□ 0.07
USE1-206ENST00000595101 ATXN3P54252 364 aaPredicted RBP15.47■□□□□ 0.07
USE1-206ENST00000595101 COPS2P61201 443 aa15.47■□□□□ 0.07
USE1-206ENST00000595101 OTUD4Q01804 1114 aaKnown RBP15.47■□□□□ 0.07
USE1-206ENST00000595101 WASHC5Q12768 1159 aa15.47■□□□□ 0.07
USE1-206ENST00000595101 RALGDSQ12967 914 aa15.47■□□□□ 0.07
USE1-206ENST00000595101 KIAA1161Q6NSJ0 714 aa15.47■□□□□ 0.07
USE1-206ENST00000595101 GCNT7Q6ZNI0 430 aa15.47■□□□□ 0.07
USE1-206ENST00000595101 SPATS2Q86XZ4 545 aaKnown RBP15.47■□□□□ 0.07
USE1-206ENST00000595101 PAF1Q8N7H5 531 aa15.47■□□□□ 0.07
USE1-206ENST00000595101 ACTL9Q8TC94 416 aa15.47■□□□□ 0.07
USE1-206ENST00000595101 TFB1MQ8WVM0 346 aaKnown RBP15.47■□□□□ 0.07
USE1-206ENST00000595101 MBNL1Q9NR56 388 aaKnown RBP15.47■□□□□ 0.07
USE1-206ENST00000595101 CHKBQ9Y259 395 aa15.47■□□□□ 0.07
USE1-206ENST00000595101 PRAMEF26H0Y7S4 382 aa15.47■□□□□ 0.07
USE1-206ENST00000595101 APOC4-APOC2K7ER74 178 aa15.47■□□□□ 0.07
USE1-206ENST00000595101 SLC30A4O14863 429 aa15.47■□□□□ 0.07
USE1-206ENST00000595101 VILLO15195 856 aa15.47■□□□□ 0.07
USE1-206ENST00000595101 FZD6O60353 706 aa15.47■□□□□ 0.07
USE1-206ENST00000595101 NEBLO76041 1014 aa15.47■□□□□ 0.07
USE1-206ENST00000595101 PGLSO95336 258 aa15.47■□□□□ 0.07
USE1-206ENST00000595101 PRLP01236 227 aa15.47■□□□□ 0.07
USE1-206ENST00000595101 APOC2P02655 101 aa15.47■□□□□ 0.07
USE1-206ENST00000595101 CTPS1P17812 591 aa15.47■□□□□ 0.07
USE1-206ENST00000595101 HNRNPA2B1P22626 353 aaKnown RBP15.47■□□□□ 0.07
USE1-206ENST00000595101 CD68P34810 354 aaPredicted RBP15.47■□□□□ 0.07
USE1-206ENST00000595101 CD86P42081 329 aa15.47■□□□□ 0.07
USE1-206ENST00000595101 CTSKP43235 329 aa15.47■□□□□ 0.07
USE1-206ENST00000595101 LIG3P49916 1009 aa15.47■□□□□ 0.07
USE1-206ENST00000595101 IL9RQ01113 521 aa15.47■□□□□ 0.07
USE1-206ENST00000595101 STAT4Q14765 748 aa15.47■□□□□ 0.07
USE1-206ENST00000595101 TMEM52BQ4KMG9 183 aa15.47■□□□□ 0.07
USE1-206ENST00000595101 ZNF662Q6ZS27 426 aa15.47■□□□□ 0.07
USE1-206ENST00000595101 KDELC2Q7Z4H8 507 aa15.47■□□□□ 0.07
USE1-206ENST00000595101 UBL4BQ8N7F7 174 aa15.47■□□□□ 0.07
USE1-206ENST00000595101 OR13H1Q8NG92 308 aa15.47■□□□□ 0.07
USE1-206ENST00000595101 SPATA22Q8NHS9 363 aa15.47■□□□□ 0.07
USE1-206ENST00000595101 CXorf40AQ8TE69 158 aa15.47■□□□□ 0.07
USE1-206ENST00000595101 PIH1D2Q8WWB5 315 aa15.47■□□□□ 0.07
USE1-206ENST00000595101 RBM15Q96T37 977 aaKnown RBP eCLIP15.47■□□□□ 0.07
USE1-206ENST00000595101 B4GALT6Q9UBX8 382 aa15.47■□□□□ 0.07
USE1-206ENST00000595101 DMTF1Q9Y222 760 aa15.47■□□□□ 0.07
USE1-206ENST00000595101 MIF4GDA9UHW6 222 aaKnown RBP15.46■□□□□ 0.07
USE1-206ENST00000595101 TLR4O00206 839 aa15.46■□□□□ 0.07
USE1-206ENST00000595101 SOCS5O75159 536 aa15.46■□□□□ 0.07
USE1-206ENST00000595101 ALPIP09923 528 aa15.46■□□□□ 0.07
USE1-206ENST00000595101 C6P13671 934 aa15.46■□□□□ 0.07
USE1-206ENST00000595101 GM2AP17900 193 aa15.46■□□□□ 0.07
USE1-206ENST00000595101 RBL1P28749 1068 aa15.46■□□□□ 0.07
USE1-206ENST00000595101 PTPN7P35236 360 aa15.46■□□□□ 0.07
USE1-206ENST00000595101 LIMK1P53667 647 aa15.46■□□□□ 0.07
USE1-206ENST00000595101 SKOR1P84550 965 aa15.46■□□□□ 0.07
USE1-206ENST00000595101 SGCGQ13326 291 aa15.46■□□□□ 0.07
USE1-206ENST00000595101 GSE1Q14687 1217 aa15.46■□□□□ 0.07
USE1-206ENST00000595101 NOMO1Q15155 1222 aa15.46■□□□□ 0.07
USE1-206ENST00000595101 TEAD4Q15561 434 aa15.46■□□□□ 0.07
USE1-206ENST00000595101 TEX44Q53QW1 395 aa15.46■□□□□ 0.07
USE1-206ENST00000595101 TPRG1LQ5T0D9 272 aa15.46■□□□□ 0.07
USE1-206ENST00000595101 MEI1Q5TIA1 1274 aa15.46■□□□□ 0.07
USE1-206ENST00000595101 CCDC181Q5TID7 509 aa15.46■□□□□ 0.07
USE1-206ENST00000595101 SLC22A18ASQ8N1D0 253 aa15.46■□□□□ 0.07
USE1-206ENST00000595101 CENPTQ96BT3 561 aa15.46■□□□□ 0.07
USE1-206ENST00000595101 UBP1Q9NZI7 540 aa15.46■□□□□ 0.07
USE1-206ENST00000595101 R3HDM2Q9Y2K5 976 aaKnown RBP15.46■□□□□ 0.07
USE1-206ENST00000595101 MT-CYBP00156 380 aaPredicted RBP15.45■□□□□ 0.06
USE1-206ENST00000595101 CPP00450 1065 aa15.45■□□□□ 0.06
USE1-206ENST00000595101 AKT2P31751 481 aa15.45■□□□□ 0.06
USE1-206ENST00000595101 C21orf59P57076 290 aa15.45■□□□□ 0.06
USE1-206ENST00000595101 NXPH1P58417 271 aa15.45■□□□□ 0.06
USE1-206ENST00000595101 ELP6Q0PNE2 266 aa15.45■□□□□ 0.06
USE1-206ENST00000595101 ARMC12Q5T9G4 340 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms