RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 ARL5CA6NH57 179 aa16.6■□□□□ 0.25
LIG1-206ENST00000594067 A8MT66 165 aa16.6■□□□□ 0.25
LIG1-206ENST00000594067 MOCS2O96007 188 aaPredicted RBP16.6■□□□□ 0.25
LIG1-206ENST00000594067 MT-CO1P00395 513 aa16.6■□□□□ 0.25
LIG1-206ENST00000594067 PGFP49763 221 aa16.6■□□□□ 0.25
LIG1-206ENST00000594067 ADARP55265 1226 aaKnown RBP16.6■□□□□ 0.25
LIG1-206ENST00000594067 DNAJB13P59910 316 aa16.6■□□□□ 0.25
LIG1-206ENST00000594067 RALGDSQ12967 914 aa16.6■□□□□ 0.25
LIG1-206ENST00000594067 DCTN2Q13561 401 aaKnown RBP16.6■□□□□ 0.25
LIG1-206ENST00000594067 CYTH1Q15438 398 aa16.6■□□□□ 0.25
LIG1-206ENST00000594067 AGKQ53H12 422 aa16.6■□□□□ 0.25
LIG1-206ENST00000594067 KIAA0930Q6ICG6 404 aaPredicted RBP16.6■□□□□ 0.25
LIG1-206ENST00000594067 TSPAN14Q8NG11 270 aa16.6■□□□□ 0.25
LIG1-206ENST00000594067 EME1Q96AY2 570 aa16.6■□□□□ 0.25
LIG1-206ENST00000594067 FCRL2Q96LA5 508 aaPredicted RBP16.6■□□□□ 0.25
LIG1-206ENST00000594067 COQ10BQ9H8M1 238 aa16.6■□□□□ 0.25
LIG1-206ENST00000594067 RHBDL2Q9NX52 303 aa16.6■□□□□ 0.25
LIG1-206ENST00000594067 MPP6Q9NZW5 540 aa16.6■□□□□ 0.25
LIG1-206ENST00000594067 CCDC167Q9P0B6 97 aa16.6■□□□□ 0.25
LIG1-206ENST00000594067 THEGQ9P2T0 379 aa16.6■□□□□ 0.25
LIG1-206ENST00000594067 EPS15L1Q9UBC2 864 aa16.6■□□□□ 0.25
LIG1-206ENST00000594067 ST3GAL5Q9UNP4 418 aa16.6■□□□□ 0.25
LIG1-206ENST00000594067 IRAK2O43187 625 aa16.6■□□□□ 0.25
LIG1-206ENST00000594067 HSPA1AP0DMV8 641 aaKnown RBP16.6■□□□□ 0.25
LIG1-206ENST00000594067 HSPA1BP0DMV9 641 aaKnown RBP16.6■□□□□ 0.25
LIG1-206ENST00000594067 BRCC3P46736 316 aa16.6■□□□□ 0.25
LIG1-206ENST00000594067 KPNA2P52292 529 aaKnown RBP16.6■□□□□ 0.25
LIG1-206ENST00000594067 TXNL4AP83876 142 aaKnown RBP16.6■□□□□ 0.25
LIG1-206ENST00000594067 FASTKQ14296 549 aaKnown RBP16.6■□□□□ 0.25
LIG1-206ENST00000594067 FAM83EQ2M2I3 478 aa16.6■□□□□ 0.25
LIG1-206ENST00000594067 RANBP10Q6VN20 620 aa16.6■□□□□ 0.25
LIG1-206ENST00000594067 CUZD1Q86UP6 607 aa16.6■□□□□ 0.25
LIG1-206ENST00000594067 ZC3H15Q8WU90 426 aaKnown RBP16.6■□□□□ 0.25
LIG1-206ENST00000594067 TMIGD2Q96BF3 282 aa16.6■□□□□ 0.25
LIG1-206ENST00000594067 ZNF597Q96LX8 424 aa16.6■□□□□ 0.25
LIG1-206ENST00000594067 UBDO15205 165 aa16.59■□□□□ 0.25
LIG1-206ENST00000594067 IGLV3-25P01717 112 aa16.59■□□□□ 0.25
LIG1-206ENST00000594067 CTSHP09668 335 aa16.59■□□□□ 0.25
LIG1-206ENST00000594067 ZNF23P17027 643 aa16.59■□□□□ 0.25
LIG1-206ENST00000594067 TSPAN8P19075 237 aa16.59■□□□□ 0.25
LIG1-206ENST00000594067 REP15Q6BDI9 236 aa16.59■□□□□ 0.25
LIG1-206ENST00000594067 LAYNQ6UX15 382 aa16.59■□□□□ 0.25
LIG1-206ENST00000594067 GRIN3AQ8TCU5 1115 aa16.59■□□□□ 0.25
LIG1-206ENST00000594067 DIS3LQ8TF46 1054 aaKnown RBP16.59■□□□□ 0.25
LIG1-206ENST00000594067 PTCD2Q8WV60 388 aaKnown RBP16.59■□□□□ 0.25
LIG1-206ENST00000594067 ZNF512Q96ME7 567 aaPredicted RBP16.59■□□□□ 0.25
LIG1-206ENST00000594067 CATSPERBQ9H7T0 1116 aa16.59■□□□□ 0.25
LIG1-206ENST00000594067 MRM3Q9HC36 420 aaKnown RBP16.59■□□□□ 0.25
LIG1-206ENST00000594067 ZNF236Q9UL36 1845 aa16.59■□□□□ 0.25
LIG1-206ENST00000594067 H0YJX3 145 aa16.59■□□□□ 0.25
LIG1-206ENST00000594067 FBP2O00757 339 aa16.59■□□□□ 0.25
LIG1-206ENST00000594067 CSPG5O95196 566 aa16.59■□□□□ 0.25
LIG1-206ENST00000594067 ZNF865P0CJ78 1059 aaPredicted RBP16.59■□□□□ 0.25
LIG1-206ENST00000594067 WNT3AP56704 352 aa16.59■□□□□ 0.25
LIG1-206ENST00000594067 PFKPQ01813 784 aa16.59■□□□□ 0.25
LIG1-206ENST00000594067 CHSY3Q70JA7 882 aa16.59■□□□□ 0.25
LIG1-206ENST00000594067 C14orf80Q86SX3 495 aa16.59■□□□□ 0.25
LIG1-206ENST00000594067 LRRTM3Q86VH5 581 aa16.59■□□□□ 0.25
LIG1-206ENST00000594067 CASP10Q92851 521 aa16.59■□□□□ 0.25
LIG1-206ENST00000594067 ASB9Q96DX5 294 aa16.59■□□□□ 0.25
LIG1-206ENST00000594067 PHF12Q96QT6 1004 aa16.59■□□□□ 0.25
LIG1-206ENST00000594067 CACNA2D2Q9NY47 1150 aa16.59■□□□□ 0.25
LIG1-206ENST00000594067 UTP6Q9NYH9 597 aaKnown RBP16.59■□□□□ 0.25
LIG1-206ENST00000594067 RSL24D1Q9UHA3 163 aaKnown RBP16.59■□□□□ 0.25
LIG1-206ENST00000594067 SLC45A1Q9Y2W3 748 aa16.59■□□□□ 0.25
LIG1-206ENST00000594067 AP4S1Q9Y587 144 aa16.59■□□□□ 0.25
LIG1-206ENST00000594067 PSMD12O00232 456 aaPredicted RBP16.58■□□□□ 0.25
LIG1-206ENST00000594067 GPC4O75487 556 aa16.58■□□□□ 0.25
LIG1-206ENST00000594067 IPO13O94829 963 aaKnown RBP16.58■□□□□ 0.25
LIG1-206ENST00000594067 CYP2C18P33260 490 aa16.58■□□□□ 0.25
LIG1-206ENST00000594067 ALDH3B2P48448 385 aa16.58■□□□□ 0.25
LIG1-206ENST00000594067 GALK1P51570 392 aa16.58■□□□□ 0.25
LIG1-206ENST00000594067 IKBKEQ14164 716 aa16.58■□□□□ 0.25
LIG1-206ENST00000594067 TRIM25Q14258 630 aaKnown RBP16.58■□□□□ 0.25
LIG1-206ENST00000594067 C9orf131Q5VYM1 1079 aa16.58■□□□□ 0.25
LIG1-206ENST00000594067 LDB1Q86U70 411 aaPredicted RBP16.58■□□□□ 0.25
LIG1-206ENST00000594067 ANKRD49Q8WVL7 239 aa16.58■□□□□ 0.25
LIG1-206ENST00000594067 CCT7Q99832 543 aa16.58■□□□□ 0.25
LIG1-206ENST00000594067 CCL22O00626 93 aa16.58■□□□□ 0.24
LIG1-206ENST00000594067 LTA4HP09960 611 aaKnown RBP16.58■□□□□ 0.24
LIG1-206ENST00000594067 FGFR3P22607 806 aa16.58■□□□□ 0.24
LIG1-206ENST00000594067 STX5Q13190 355 aa16.58■□□□□ 0.24
LIG1-206ENST00000594067 EIF4EBP2Q13542 120 aaPredicted RBP16.58■□□□□ 0.24
LIG1-206ENST00000594067 LRP8Q14114 963 aa16.58■□□□□ 0.24
LIG1-206ENST00000594067 SQLEQ14534 574 aa16.58■□□□□ 0.24
LIG1-206ENST00000594067 UPP1Q16831 310 aa16.58■□□□□ 0.24
LIG1-206ENST00000594067 AGAP9Q5VTM2 703 aa16.58■□□□□ 0.24
LIG1-206ENST00000594067 FAM171BQ6P995 826 aa16.58■□□□□ 0.24
LIG1-206ENST00000594067 AGMOQ6ZNB7 445 aa16.58■□□□□ 0.24
LIG1-206ENST00000594067 ANKRD23Q86SG2 305 aa16.58■□□□□ 0.24
LIG1-206ENST00000594067 ERI1Q8IV48 349 aaKnown RBP16.58■□□□□ 0.24
LIG1-206ENST00000594067 CCDC117Q8IWD4 279 aaPredicted RBP16.58■□□□□ 0.24
LIG1-206ENST00000594067 TRIML2Q8N7C3 387 aa16.58■□□□□ 0.24
LIG1-206ENST00000594067 LRTOMTQ8WZ04 291 aa16.58■□□□□ 0.24
LIG1-206ENST00000594067 LPGAT1Q92604 370 aa16.58■□□□□ 0.24
LIG1-206ENST00000594067 HAUS8Q9BT25 410 aa16.58■□□□□ 0.24
LIG1-206ENST00000594067 UNC93B1Q9H1C4 597 aa16.58■□□□□ 0.24
LIG1-206ENST00000594067 MEAF6Q9HAF1 191 aa16.58■□□□□ 0.24
LIG1-206ENST00000594067 MTF2Q9Y483 593 aaPredicted RBP16.58■□□□□ 0.24
LIG1-206ENST00000594067 MYLKQ15746 1914 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms