RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 LRRK1Q38SD2 2015 aa18.62■□□□□ 0.57
SHKBP1-202ENST00000593764 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.61■□□□□ 0.57
SHKBP1-202ENST00000593764 LRRD1A4D1F6 860 aa18.61■□□□□ 0.57
SHKBP1-202ENST00000593764 C6P13671 934 aa18.61■□□□□ 0.57
SHKBP1-202ENST00000593764 COMTP21964 271 aa18.61■□□□□ 0.57
SHKBP1-202ENST00000593764 DGKAP23743 735 aa18.61■□□□□ 0.57
SHKBP1-202ENST00000593764 CCNCP24863 283 aa18.61■□□□□ 0.57
SHKBP1-202ENST00000593764 SLC1A1P43005 524 aa18.61■□□□□ 0.57
SHKBP1-202ENST00000593764 LIG3P49916 1009 aa18.61■□□□□ 0.57
SHKBP1-202ENST00000593764 RALGDSQ12967 914 aa18.61■□□□□ 0.57
SHKBP1-202ENST00000593764 IFI16Q16666 785 aaKnown RBP18.61■□□□□ 0.57
SHKBP1-202ENST00000593764 WSCD2Q2TBF2 565 aa18.61■□□□□ 0.57
SHKBP1-202ENST00000593764 ZNF542PQ5EBM4 170 aa18.61■□□□□ 0.57
SHKBP1-202ENST00000593764 ZFYVE27Q5T4F4 411 aa18.61■□□□□ 0.57
SHKBP1-202ENST00000593764 ERAP2Q6P179 960 aa18.61■□□□□ 0.57
SHKBP1-202ENST00000593764 VSIG1Q86XK7 387 aa18.61■□□□□ 0.57
SHKBP1-202ENST00000593764 PLD5Q8N7P1 536 aa18.61■□□□□ 0.57
SHKBP1-202ENST00000593764 LRRN4Q8WUT4 740 aa18.61■□□□□ 0.57
SHKBP1-202ENST00000593764 NSMCE1Q8WV22 266 aa18.61■□□□□ 0.57
SHKBP1-202ENST00000593764 FATE1Q969F0 183 aa18.61■□□□□ 0.57
SHKBP1-202ENST00000593764 NT5MQ9NPB1 228 aa18.61■□□□□ 0.57
SHKBP1-202ENST00000593764 SCUBE2Q9NQ36 999 aa18.61■□□□□ 0.57
SHKBP1-202ENST00000593764 UCKL1Q9NWZ5 548 aa18.61■□□□□ 0.57
SHKBP1-202ENST00000593764 DTLQ9NZJ0 730 aa18.61■□□□□ 0.57
SHKBP1-202ENST00000593764 FTSJ1Q9UET6 329 aa18.61■□□□□ 0.57
SHKBP1-202ENST00000593764 KLF15Q9UIH9 416 aa18.61■□□□□ 0.57
SHKBP1-202ENST00000593764 KLK13Q9UKR3 277 aa18.61■□□□□ 0.57
SHKBP1-202ENST00000593764 COL5A1P20908 1838 aaPredicted RBP18.6■□□□□ 0.57
SHKBP1-202ENST00000593764 WDFY3Q8IZQ1 3526 aa18.6■□□□□ 0.57
SHKBP1-202ENST00000593764 MAP1BP46821 2468 aaKnown RBP18.6■□□□□ 0.57
SHKBP1-202ENST00000593764 FAM221BA6H8Z2 402 aa18.6■□□□□ 0.57
SHKBP1-202ENST00000593764 MATN3O15232 486 aa18.6■□□□□ 0.57
SHKBP1-202ENST00000593764 SOCS5O75159 536 aa18.6■□□□□ 0.57
SHKBP1-202ENST00000593764 PIAS2O75928 621 aa18.6■□□□□ 0.57
SHKBP1-202ENST00000593764 POLR2LP62875 67 aaKnown RBP18.6■□□□□ 0.57
SHKBP1-202ENST00000593764 TRAF2Q12933 501 aa18.6■□□□□ 0.57
SHKBP1-202ENST00000593764 PDE1CQ14123 709 aaPredicted RBP18.6■□□□□ 0.57
SHKBP1-202ENST00000593764 IHHQ14623 411 aa18.6■□□□□ 0.57
SHKBP1-202ENST00000593764 AGERQ15109 404 aa18.6■□□□□ 0.57
SHKBP1-202ENST00000593764 RALGPS1Q5JS13 557 aa18.6■□□□□ 0.57
SHKBP1-202ENST00000593764 BBS5Q8N3I7 341 aa18.6■□□□□ 0.57
SHKBP1-202ENST00000593764 C1QTNF7Q9BXJ2 289 aa18.6■□□□□ 0.57
SHKBP1-202ENST00000593764 TMEM121BQ9BXQ6 578 aaPredicted RBP18.6■□□□□ 0.57
SHKBP1-202ENST00000593764 EPN1Q9Y6I3 576 aaPredicted RBP18.6■□□□□ 0.57
SHKBP1-202ENST00000593764 EPG5Q9HCE0 2579 aa18.6■□□□□ 0.57
SHKBP1-202ENST00000593764 CFAP69A5D8W1 941 aa18.59■□□□□ 0.57
SHKBP1-202ENST00000593764 SOWAHDA6NJG2 315 aa18.59■□□□□ 0.57
SHKBP1-202ENST00000593764 GOLGA8CPA6NN73 597 aa18.59■□□□□ 0.57
SHKBP1-202ENST00000593764 TRIM38O00635 465 aa18.59■□□□□ 0.57
SHKBP1-202ENST00000593764 ENC1O14682 589 aa18.59■□□□□ 0.57
SHKBP1-202ENST00000593764 LDOC1O95751 146 aaPredicted RBP18.59■□□□□ 0.57
SHKBP1-202ENST00000593764 CSF2P04141 144 aa18.59■□□□□ 0.57
SHKBP1-202ENST00000593764 GIMD1P0DJR0 217 aa18.59■□□□□ 0.57
SHKBP1-202ENST00000593764 GM2AP17900 193 aa18.59■□□□□ 0.57
SHKBP1-202ENST00000593764 CYLC1P35663 651 aaPredicted RBP18.59■□□□□ 0.57
SHKBP1-202ENST00000593764 NOP2P46087 812 aaKnown RBP18.59■□□□□ 0.57
SHKBP1-202ENST00000593764 LRRC14Q15048 493 aa18.59■□□□□ 0.57
SHKBP1-202ENST00000593764 IRF4Q15306 451 aa18.59■□□□□ 0.57
SHKBP1-202ENST00000593764 SLC9A4Q6AI14 798 aa18.59■□□□□ 0.57
SHKBP1-202ENST00000593764 ALG1LQ6GMV1 187 aa18.59■□□□□ 0.57
SHKBP1-202ENST00000593764 TIGD7Q6NT04 549 aaPredicted RBP18.59■□□□□ 0.57
SHKBP1-202ENST00000593764 LIPIQ6XZB0 460 aa18.59■□□□□ 0.57
SHKBP1-202ENST00000593764 DPPA4Q7L190 304 aa18.59■□□□□ 0.57
SHKBP1-202ENST00000593764 RHOT1Q8IXI2 618 aa18.59■□□□□ 0.57
SHKBP1-202ENST00000593764 HDAC11Q96DB2 347 aa18.59■□□□□ 0.57
SHKBP1-202ENST00000593764 CNDP2Q96KP4 475 aaKnown RBP18.59■□□□□ 0.57
SHKBP1-202ENST00000593764 GOLPH3Q9H4A6 298 aa18.59■□□□□ 0.57
SHKBP1-202ENST00000593764 DNAJC28Q9NX36 388 aa18.59■□□□□ 0.57
SHKBP1-202ENST00000593764 SALL4Q9UJQ4 1053 aa18.59■□□□□ 0.57
SHKBP1-202ENST00000593764 PNMA8BQ9ULN7 279 aaPredicted RBP18.59■□□□□ 0.57
SHKBP1-202ENST00000593764 NEUROG3Q9Y4Z2 214 aa18.59■□□□□ 0.57
SHKBP1-202ENST00000593764 ALG6Q9Y672 507 aa18.59■□□□□ 0.57
SHKBP1-202ENST00000593764 KNTC1P50748 2209 aa18.58■□□□□ 0.57
SHKBP1-202ENST00000593764 A0A0A6YYK5 440 aaPredicted RBP18.58■□□□□ 0.56
SHKBP1-202ENST00000593764 RCCD1A6NED2 376 aa18.58■□□□□ 0.56
SHKBP1-202ENST00000593764 NDUFA10O95299 355 aa18.58■□□□□ 0.56
SHKBP1-202ENST00000593764 CCNB1P14635 433 aa18.58■□□□□ 0.56
SHKBP1-202ENST00000593764 NME1P15531 152 aaKnown RBP18.58■□□□□ 0.56
SHKBP1-202ENST00000593764 MX2P20592 715 aa18.58■□□□□ 0.56
SHKBP1-202ENST00000593764 YPEL5P62699 121 aa18.58■□□□□ 0.56
SHKBP1-202ENST00000593764 EIF2B5Q13144 721 aaKnown RBP18.58■□□□□ 0.56
SHKBP1-202ENST00000593764 DNAJC3Q13217 504 aa18.58■□□□□ 0.56
SHKBP1-202ENST00000593764 SPA17Q15506 151 aa18.58■□□□□ 0.56
SHKBP1-202ENST00000593764 PARGQ86W56 976 aa18.58■□□□□ 0.56
SHKBP1-202ENST00000593764 TMTC1Q8IUR5 882 aa18.58■□□□□ 0.56
SHKBP1-202ENST00000593764 GATA6Q92908 595 aa18.58■□□□□ 0.56
SHKBP1-202ENST00000593764 RNF25Q96BH1 459 aaPredicted RBP18.58■□□□□ 0.56
SHKBP1-202ENST00000593764 LGMNQ99538 433 aa18.58■□□□□ 0.56
SHKBP1-202ENST00000593764 SEMA3CQ99985 751 aa18.58■□□□□ 0.56
SHKBP1-202ENST00000593764 RBM22Q9NW64 420 aaKnown RBP eCLIP18.58■□□□□ 0.56
SHKBP1-202ENST00000593764 DDX56Q9NY93 547 aaKnown RBP18.58■□□□□ 0.56
SHKBP1-202ENST00000593764 MSRB2Q9Y3D2 182 aa18.58■□□□□ 0.56
SHKBP1-202ENST00000593764 GOLGA4Q13439 2230 aaKnown RBP18.58■□□□□ 0.56
SHKBP1-202ENST00000593764 FREM2Q5SZK8 3169 aa18.57■□□□□ 0.56
SHKBP1-202ENST00000593764 A0A1W2PQ67 120 aa18.57■□□□□ 0.56
SHKBP1-202ENST00000593764 A8MX80 341 aa18.57■□□□□ 0.56
SHKBP1-202ENST00000593764 TOR1BO14657 336 aa18.57■□□□□ 0.56
SHKBP1-202ENST00000593764 SIGLEC6O43699 453 aa18.57■□□□□ 0.56
SHKBP1-202ENST00000593764 SPOPO43791 374 aa18.57■□□□□ 0.56
SHKBP1-202ENST00000593764 LZTS3O60299 673 aaPredicted RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms