RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 SOX5P35711 763 aa17.63■□□□□ 0.41
RETREG3-212ENST00000593251 PEX5P50542 639 aa17.63■□□□□ 0.41
RETREG3-212ENST00000593251 BLKP51451 505 aa17.63■□□□□ 0.41
RETREG3-212ENST00000593251 JAM2P57087 298 aa17.63■□□□□ 0.41
RETREG3-212ENST00000593251 SRP54P61011 504 aaKnown RBP17.63■□□□□ 0.41
RETREG3-212ENST00000593251 ELP6Q0PNE2 266 aa17.63■□□□□ 0.41
RETREG3-212ENST00000593251 SRSF6Q13247 344 aaKnown RBP17.63■□□□□ 0.41
RETREG3-212ENST00000593251 SERINC3Q13530 473 aa17.63■□□□□ 0.41
RETREG3-212ENST00000593251 INPP5AQ14642 412 aa17.63■□□□□ 0.41
RETREG3-212ENST00000593251 NFATC4Q14934 902 aa17.63■□□□□ 0.41
RETREG3-212ENST00000593251 EFHC2Q5JST6 749 aa17.63■□□□□ 0.41
RETREG3-212ENST00000593251 RAB11FIP2Q7L804 512 aa17.63■□□□□ 0.41
RETREG3-212ENST00000593251 CASKIN2Q8WXE0 1202 aa17.63■□□□□ 0.41
RETREG3-212ENST00000593251 MED8Q96G25 268 aa17.63■□□□□ 0.41
RETREG3-212ENST00000593251 CCNL2Q96S94 520 aaPredicted RBP17.63■□□□□ 0.41
RETREG3-212ENST00000593251 PCDH12Q9NPG4 1184 aa17.63■□□□□ 0.41
RETREG3-212ENST00000593251 ADAM22Q9P0K1 906 aa17.63■□□□□ 0.41
RETREG3-212ENST00000593251 DACH1Q9UI36 760 aa17.63■□□□□ 0.41
RETREG3-212ENST00000593251 DAAM1Q9Y4D1 1078 aa17.63■□□□□ 0.41
RETREG3-212ENST00000593251 ARHGEF17Q96PE2 2063 aaPredicted RBP17.63■□□□□ 0.41
RETREG3-212ENST00000593251 PCCBP05166 539 aa17.62■□□□□ 0.41
RETREG3-212ENST00000593251 EEF1GP26641 437 aaKnown RBP17.62■□□□□ 0.41
RETREG3-212ENST00000593251 MLLT3P42568 568 aaPredicted RBP17.62■□□□□ 0.41
RETREG3-212ENST00000593251 NSFP46459 744 aaKnown RBP17.62■□□□□ 0.41
RETREG3-212ENST00000593251 TGIF1Q15583 401 aa17.62■□□□□ 0.41
RETREG3-212ENST00000593251 UGP2Q16851 508 aa17.62■□□□□ 0.41
RETREG3-212ENST00000593251 ZSWIM9Q86XI8 627 aa17.62■□□□□ 0.41
RETREG3-212ENST00000593251 GKN2Q86XP6 184 aa17.62■□□□□ 0.41
RETREG3-212ENST00000593251 PLA2G15Q8NCC3 412 aa17.62■□□□□ 0.41
RETREG3-212ENST00000593251 PDXPQ96GD0 296 aa17.62■□□□□ 0.41
RETREG3-212ENST00000593251 SUV39H2Q9H5I1 410 aa17.62■□□□□ 0.41
RETREG3-212ENST00000593251 KLQ9UEF7 1012 aa17.62■□□□□ 0.41
RETREG3-212ENST00000593251 BOD1L1Q8NFC6 3051 aa17.61■□□□□ 0.41
RETREG3-212ENST00000593251 TMEM110-MUSTN1A8MSY1 372 aa17.61■□□□□ 0.41
RETREG3-212ENST00000593251 J3KR12 359 aa17.61■□□□□ 0.41
RETREG3-212ENST00000593251 SLC28A2O43868 658 aa17.61■□□□□ 0.41
RETREG3-212ENST00000593251 BUB1BO60566 1050 aaPredicted RBP17.61■□□□□ 0.41
RETREG3-212ENST00000593251 HTR1BP28222 390 aa17.61■□□□□ 0.41
RETREG3-212ENST00000593251 LIG3P49916 1009 aa17.61■□□□□ 0.41
RETREG3-212ENST00000593251 INHBCP55103 352 aa17.61■□□□□ 0.41
RETREG3-212ENST00000593251 YBEYP58557 167 aaPredicted RBP17.61■□□□□ 0.41
RETREG3-212ENST00000593251 LVRNQ6Q4G3 990 aa17.61■□□□□ 0.41
RETREG3-212ENST00000593251 TRIM72Q6ZMU5 477 aa17.61■□□□□ 0.41
RETREG3-212ENST00000593251 DNAAF5Q86Y56 855 aa17.61■□□□□ 0.41
RETREG3-212ENST00000593251 SFTPA2Q8IWL1 248 aa17.61■□□□□ 0.41
RETREG3-212ENST00000593251 Q8N9G6 341 aaPredicted RBP17.61■□□□□ 0.41
RETREG3-212ENST00000593251 WDR92Q96MX6 357 aa17.61■□□□□ 0.41
RETREG3-212ENST00000593251 STRADBQ9C0K7 418 aa17.61■□□□□ 0.41
RETREG3-212ENST00000593251 LRRN3Q9H3W5 708 aa17.61■□□□□ 0.41
RETREG3-212ENST00000593251 UBA2Q9UBT2 640 aaPredicted RBP17.61■□□□□ 0.41
RETREG3-212ENST00000593251 PISDQ9UG56 409 aa17.61■□□□□ 0.41
RETREG3-212ENST00000593251 ATXN7L1Q9ULK2 861 aaPredicted RBP17.61■□□□□ 0.41
RETREG3-212ENST00000593251 FZD10Q9ULW2 581 aa17.61■□□□□ 0.41
RETREG3-212ENST00000593251 TSPAN11A1L157 253 aa17.6■□□□□ 0.41
RETREG3-212ENST00000593251 NOBOXO60393 691 aa17.6■□□□□ 0.41
RETREG3-212ENST00000593251 GSCP56915 257 aaPredicted RBP17.6■□□□□ 0.41
RETREG3-212ENST00000593251 KRT31Q15323 416 aa17.6■□□□□ 0.41
RETREG3-212ENST00000593251 CLEC16AQ2KHT3 1053 aa17.6■□□□□ 0.41
RETREG3-212ENST00000593251 PARP15Q460N3 678 aa17.6■□□□□ 0.41
RETREG3-212ENST00000593251 CFAP58Q5T655 872 aa17.6■□□□□ 0.41
RETREG3-212ENST00000593251 ERAP2Q6P179 960 aa17.6■□□□□ 0.41
RETREG3-212ENST00000593251 CAMK1DQ8IU85 385 aa17.6■□□□□ 0.41
RETREG3-212ENST00000593251 UMODL1-AS1Q8N2C9 162 aa17.6■□□□□ 0.41
RETREG3-212ENST00000593251 EXD3Q8N9H8 876 aa17.6■□□□□ 0.41
RETREG3-212ENST00000593251 C3orf20Q8ND61 904 aa17.6■□□□□ 0.41
RETREG3-212ENST00000593251 CATSPERBQ9H7T0 1116 aa17.6■□□□□ 0.41
RETREG3-212ENST00000593251 PDFQ9HBH1 243 aa17.6■□□□□ 0.41
RETREG3-212ENST00000593251 MRPL40Q9NQ50 206 aaKnown RBP17.6■□□□□ 0.41
RETREG3-212ENST00000593251 SEPT11Q9NVA2 429 aaKnown RBP17.6■□□□□ 0.41
RETREG3-212ENST00000593251 SIGLEC16A6NMB1 481 aa17.59■□□□□ 0.41
RETREG3-212ENST00000593251 WASH4PA8MWX3 477 aa17.59■□□□□ 0.41
RETREG3-212ENST00000593251 TNFP01375 233 aa17.59■□□□□ 0.41
RETREG3-212ENST00000593251 CALB1P05937 261 aa17.59■□□□□ 0.41
RETREG3-212ENST00000593251 JMJD7P0C870 316 aa17.59■□□□□ 0.41
RETREG3-212ENST00000593251 ITIH1P19827 911 aa17.59■□□□□ 0.41
RETREG3-212ENST00000593251 MMP12P39900 470 aa17.59■□□□□ 0.41
RETREG3-212ENST00000593251 STAT1P42224 750 aa17.59■□□□□ 0.41
RETREG3-212ENST00000593251 RGRP47804 291 aa17.59■□□□□ 0.41
RETREG3-212ENST00000593251 SUOXP51687 545 aa17.59■□□□□ 0.41
RETREG3-212ENST00000593251 RPL7AP62424 266 aaKnown RBP17.59■□□□□ 0.41
RETREG3-212ENST00000593251 EIF3IQ13347 325 aaKnown RBP17.59■□□□□ 0.41
RETREG3-212ENST00000593251 PHF13Q86YI8 300 aaPredicted RBP17.59■□□□□ 0.41
RETREG3-212ENST00000593251 CCNJLQ8IV13 435 aa17.59■□□□□ 0.41
RETREG3-212ENST00000593251 GPR156Q8NFN8 814 aa17.59■□□□□ 0.41
RETREG3-212ENST00000593251 HCAR2Q8TDS4 363 aa17.59■□□□□ 0.41
RETREG3-212ENST00000593251 OR1E3Q8WZA6 343 aa17.59■□□□□ 0.41
RETREG3-212ENST00000593251 CELF6Q96J87 481 aaKnown RBP17.59■□□□□ 0.41
RETREG3-212ENST00000593251 MCEEQ96PE7 176 aa17.59■□□□□ 0.41
RETREG3-212ENST00000593251 RBM15Q96T37 977 aaKnown RBP eCLIP17.59■□□□□ 0.41
RETREG3-212ENST00000593251 NUP62CLQ9H1M0 184 aa17.59■□□□□ 0.41
RETREG3-212ENST00000593251 GPATCH2LQ9NWQ4 482 aa17.59■□□□□ 0.41
RETREG3-212ENST00000593251 ATP8A1Q9Y2Q0 1164 aa17.59■□□□□ 0.41
RETREG3-212ENST00000593251 PCDHGA7Q9Y5G6 932 aa17.59■□□□□ 0.41
RETREG3-212ENST00000593251 AHCTF1Q8WYP5 2266 aa17.59■□□□□ 0.41
RETREG3-212ENST00000593251 TCRBV5S1A1TA0A578 114 aa17.58■□□□□ 0.4
RETREG3-212ENST00000593251 TMEM202A6NGA9 273 aa17.58■□□□□ 0.4
RETREG3-212ENST00000593251 CYSRT1A8MQ03 144 aa17.58■□□□□ 0.4
RETREG3-212ENST00000593251 CCKBRP32239 447 aa17.58■□□□□ 0.4
RETREG3-212ENST00000593251 ZNF143P52747 638 aaPredicted RBP17.58■□□□□ 0.4
RETREG3-212ENST00000593251 MTM1Q13496 603 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms