RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 CHRM4P08173 479 aa5.17□□□□□ -1.58
SMAD4-216ENST00000593223 IFIT1P09914 478 aaKnown RBP5.17□□□□□ -1.58
SMAD4-216ENST00000593223 CHRNB2P17787 502 aa5.17□□□□□ -1.58
SMAD4-216ENST00000593223 TNFAIP3P21580 790 aa5.17□□□□□ -1.58
SMAD4-216ENST00000593223 TRPC3Q13507 836 aa5.17□□□□□ -1.58
SMAD4-216ENST00000593223 IDI1Q13907 227 aa5.17□□□□□ -1.58
SMAD4-216ENST00000593223 SLC18A3Q16572 532 aa5.17□□□□□ -1.58
SMAD4-216ENST00000593223 NFIL3Q16649 462 aa5.17□□□□□ -1.58
SMAD4-216ENST00000593223 FBXO43Q4G163 708 aa5.17□□□□□ -1.58
SMAD4-216ENST00000593223 TMEM71Q6P5X7 295 aa5.17□□□□□ -1.58
SMAD4-216ENST00000593223 ZNF549Q6P9A3 640 aa5.17□□□□□ -1.58
SMAD4-216ENST00000593223 ADGRG6Q86SQ4 1221 aa5.17□□□□□ -1.58
SMAD4-216ENST00000593223 NAXEQ8NCW5 288 aa5.17□□□□□ -1.58
SMAD4-216ENST00000593223 NOC3LQ8WTT2 800 aaKnown RBP5.17□□□□□ -1.58
SMAD4-216ENST00000593223 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.17□□□□□ -1.58
SMAD4-216ENST00000593223 GPR63Q9BZJ6 419 aa5.17□□□□□ -1.58
SMAD4-216ENST00000593223 ATP8A2Q9NTI2 1148 aa5.17□□□□□ -1.58
SMAD4-216ENST00000593223 SEL1LQ9UBV2 794 aa5.17□□□□□ -1.58
SMAD4-216ENST00000593223 ITIH6Q6UXX5 1313 aa5.17□□□□□ -1.58
SMAD4-216ENST00000593223 TMEM131LA2VDJ0 1609 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 DCCP43146 1447 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 ADGRL3Q9HAR2 1447 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 A0A096LPK6 155 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 J3KRW8 73 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 TNFRSF13BO14836 293 aaPredicted RBP5.16□□□□□ -1.58
SMAD4-216ENST00000593223 PER2O15055 1255 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 CEP104O60308 925 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 OAZ2O95190 189 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 TOMM40O96008 361 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 ADAP00813 363 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 SERPINC1P01008 464 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 PYGLP06737 847 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 MMP3P08254 477 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 MYZAPP0CAP1 466 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 ENO3P13929 434 aaPredicted RBP5.16□□□□□ -1.58
SMAD4-216ENST00000593223 CCR5P51681 352 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 CDH12P55289 794 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 ZBED6P86452 979 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 TLE2Q04725 743 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.16□□□□□ -1.58
SMAD4-216ENST00000593223 PRKG2Q13237 762 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 TDGQ13569 410 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 ME3Q16798 604 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 DCAF12L2Q5VW00 463 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 ARMC3Q5W041 872 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 IL20RBQ6UXL0 311 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 TRIM74Q86UV6 250 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 TRIM73Q86UV7 250 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 CHD1LQ86WJ1 897 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 TMC8Q8IU68 726 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 ZDHHC23Q8IYP9 409 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 Q8N9P0 234 aaPredicted RBP5.16□□□□□ -1.58
SMAD4-216ENST00000593223 ENGASEQ8NFI3 743 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 RASSF8Q8NHQ8 419 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 RFWD2Q8NHY2 731 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 BICD2Q8TD16 824 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 ASB5Q8WWX0 329 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 RAB40AQ8WXH6 277 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 PPM1MQ96MI6 270 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 GFM1Q96RP9 751 aaKnown RBP5.16□□□□□ -1.58
SMAD4-216ENST00000593223 LHPPQ9H008 270 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 TSPY26PQ9H489 355 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 SLC32A1Q9H598 525 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 CATSPERBQ9H7T0 1116 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 SAGE1Q9NXZ1 904 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 CNOT7Q9UIV1 285 aaKnown RBP5.16□□□□□ -1.58
SMAD4-216ENST00000593223 TMCC3Q9ULS5 477 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 HSF4Q9ULV5 492 aa5.16□□□□□ -1.58
SMAD4-216ENST00000593223 LRRFIP2Q9Y608 721 aaKnown RBP5.16□□□□□ -1.58
SMAD4-216ENST00000593223 GTPBP10A4D1E9 387 aaKnown RBP5.15□□□□□ -1.59
SMAD4-216ENST00000593223 A6NCN8 305 aa5.15□□□□□ -1.59
SMAD4-216ENST00000593223 FAM90A7PA6NKC0 464 aa5.15□□□□□ -1.59
SMAD4-216ENST00000593223 FAM90A22PA8MWA6 464 aa5.15□□□□□ -1.59
SMAD4-216ENST00000593223 FAM90A12PA8MX19 464 aa5.15□□□□□ -1.59
SMAD4-216ENST00000593223 FAM90A23PA8MXZ1 464 aa5.15□□□□□ -1.59
SMAD4-216ENST00000593223 FAM157AC9JC47 383 aa5.15□□□□□ -1.59
SMAD4-216ENST00000593223 EYA2O00167 538 aa5.15□□□□□ -1.59
SMAD4-216ENST00000593223 NCAM2O15394 837 aa5.15□□□□□ -1.59
SMAD4-216ENST00000593223 SLC25A17O43808 307 aa5.15□□□□□ -1.59
SMAD4-216ENST00000593223 GUCY1B2O75343 617 aa5.15□□□□□ -1.59
SMAD4-216ENST00000593223 SNHG28P0DPA3 235 aa5.15□□□□□ -1.59
SMAD4-216ENST00000593223 HOXB2P14652 356 aa5.15□□□□□ -1.59
SMAD4-216ENST00000593223 ARSBP15848 533 aa5.15□□□□□ -1.59
SMAD4-216ENST00000593223 XBP1P17861 261 aa5.15□□□□□ -1.59
SMAD4-216ENST00000593223 GPR12P47775 334 aa5.15□□□□□ -1.59
SMAD4-216ENST00000593223 PPP3CCP48454 512 aa5.15□□□□□ -1.59
SMAD4-216ENST00000593223 RASSF2P50749 326 aa5.15□□□□□ -1.59
SMAD4-216ENST00000593223 ARSFP54793 590 aa5.15□□□□□ -1.59
SMAD4-216ENST00000593223 SELENOVP59797 346 aa5.15□□□□□ -1.59
SMAD4-216ENST00000593223 PKP1Q13835 747 aa5.15□□□□□ -1.59
SMAD4-216ENST00000593223 RPE65Q16518 533 aa5.15□□□□□ -1.59
SMAD4-216ENST00000593223 EDRF1Q3B7T1 1238 aa5.15□□□□□ -1.59
SMAD4-216ENST00000593223 OTUD1Q5VV17 481 aaPredicted RBP5.15□□□□□ -1.59
SMAD4-216ENST00000593223 TBC1D9BQ66K14 1250 aa5.15□□□□□ -1.59
SMAD4-216ENST00000593223 RETSATQ6NUM9 610 aa5.15□□□□□ -1.59
SMAD4-216ENST00000593223 SLC22A25Q6T423 547 aa5.15□□□□□ -1.59
SMAD4-216ENST00000593223 C1orf122Q6ZSJ8 110 aa5.15□□□□□ -1.59
SMAD4-216ENST00000593223 LRRC8DQ7L1W4 858 aa5.15□□□□□ -1.59
SMAD4-216ENST00000593223 CADM3Q8N126 398 aa5.15□□□□□ -1.59
SMAD4-216ENST00000593223 SLC35F5Q8WV83 523 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms