RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 ZNF248Q8NDW4 579 aa18.08■□□□□ 0.48
CIRBP-243ENST00000593128 ATXN7L3BQ96GX2 97 aa18.08■□□□□ 0.48
CIRBP-243ENST00000593128 VCPIP1Q96JH7 1222 aa18.08■□□□□ 0.48
CIRBP-243ENST00000593128 UBL7Q96S82 380 aaPredicted RBP18.08■□□□□ 0.48
CIRBP-243ENST00000593128 CLPBQ9H078 707 aa18.08■□□□□ 0.48
CIRBP-243ENST00000593128 ATP13A3Q9H7F0 1226 aa18.08■□□□□ 0.48
CIRBP-243ENST00000593128 POLR1BQ9H9Y6 1135 aa18.08■□□□□ 0.48
CIRBP-243ENST00000593128 TMEM63CQ9P1W3 806 aa18.08■□□□□ 0.48
CIRBP-243ENST00000593128 ATP8A1Q9Y2Q0 1164 aa18.08■□□□□ 0.48
CIRBP-243ENST00000593128 IGSF10Q6WRI0 2623 aa18.08■□□□□ 0.48
CIRBP-243ENST00000593128 ATRXP46100 2492 aa18.08■□□□□ 0.48
CIRBP-243ENST00000593128 EME2A4GXA9 379 aaPredicted RBP18.07■□□□□ 0.48
CIRBP-243ENST00000593128 LMO7DNF2Z398 122 aa18.07■□□□□ 0.48
CIRBP-243ENST00000593128 RIOK3O14730 519 aaKnown RBP18.07■□□□□ 0.48
CIRBP-243ENST00000593128 CASC3O15234 703 aaKnown RBP18.07■□□□□ 0.48
CIRBP-243ENST00000593128 PRB1P04280 392 aa18.07■□□□□ 0.48
CIRBP-243ENST00000593128 SKILP12757 684 aa18.07■□□□□ 0.48
CIRBP-243ENST00000593128 MIPP30301 263 aa18.07■□□□□ 0.48
CIRBP-243ENST00000593128 BLKP51451 505 aa18.07■□□□□ 0.48
CIRBP-243ENST00000593128 SUOXP51687 545 aa18.07■□□□□ 0.48
CIRBP-243ENST00000593128 BCL2L1Q07817 233 aa18.07■□□□□ 0.48
CIRBP-243ENST00000593128 KLHL30Q0D2K2 578 aa18.07■□□□□ 0.48
CIRBP-243ENST00000593128 ISXQ2M1V0 245 aa18.07■□□□□ 0.48
CIRBP-243ENST00000593128 PLEKHA7Q6IQ23 1121 aa18.07■□□□□ 0.48
CIRBP-243ENST00000593128 BRAT1Q6PJG6 821 aa18.07■□□□□ 0.48
CIRBP-243ENST00000593128 NYAP1Q6ZVC0 841 aa18.07■□□□□ 0.48
CIRBP-243ENST00000593128 ZNF571Q7Z3V5 609 aaPredicted RBP18.07■□□□□ 0.48
CIRBP-243ENST00000593128 ZSWIM9Q86XI8 627 aa18.07■□□□□ 0.48
CIRBP-243ENST00000593128 LSMEM2Q8N112 164 aa18.07■□□□□ 0.48
CIRBP-243ENST00000593128 ARFGAP1Q8N6T3 406 aa18.07■□□□□ 0.48
CIRBP-243ENST00000593128 PCDH19Q8TAB3 1148 aa18.07■□□□□ 0.48
CIRBP-243ENST00000593128 SCG3Q8WXD2 468 aaKnown RBP18.07■□□□□ 0.48
CIRBP-243ENST00000593128 ZNF578Q96N58 590 aaPredicted RBP18.07■□□□□ 0.48
CIRBP-243ENST00000593128 ZNF641Q96N77 438 aaPredicted RBP18.07■□□□□ 0.48
CIRBP-243ENST00000593128 CCDC3Q9BQI4 270 aa18.07■□□□□ 0.48
CIRBP-243ENST00000593128 APOOQ9BUR5 198 aa18.07■□□□□ 0.48
CIRBP-243ENST00000593128 BOCQ9BWV1 1114 aa18.07■□□□□ 0.48
CIRBP-243ENST00000593128 PRORYQ9H606 182 aa18.07■□□□□ 0.48
CIRBP-243ENST00000593128 KLQ9UEF7 1012 aa18.07■□□□□ 0.48
CIRBP-243ENST00000593128 PADI4Q9UM07 663 aa18.07■□□□□ 0.48
CIRBP-243ENST00000593128 MYO6Q9UM54 1294 aa18.07■□□□□ 0.48
CIRBP-243ENST00000593128 TMEM191CA6NGB0 347 aa18.06■□□□□ 0.48
CIRBP-243ENST00000593128 TOR1BO14657 336 aa18.06■□□□□ 0.48
CIRBP-243ENST00000593128 RASGRP1O95267 797 aa18.06■□□□□ 0.48
CIRBP-243ENST00000593128 RBMS1P29558 406 aaKnown RBP18.06■□□□□ 0.48
CIRBP-243ENST00000593128 MMP12P39900 470 aa18.06■□□□□ 0.48
CIRBP-243ENST00000593128 LSSP48449 732 aa18.06■□□□□ 0.48
CIRBP-243ENST00000593128 SCNN1BP51168 640 aa18.06■□□□□ 0.48
CIRBP-243ENST00000593128 HK3P52790 923 aa18.06■□□□□ 0.48
CIRBP-243ENST00000593128 TLE3Q04726 772 aa18.06■□□□□ 0.48
CIRBP-243ENST00000593128 NFATC4Q14934 902 aa18.06■□□□□ 0.48
CIRBP-243ENST00000593128 ELOCQ15369 112 aa18.06■□□□□ 0.48
CIRBP-243ENST00000593128 ALG11Q2TAA5 492 aa18.06■□□□□ 0.48
CIRBP-243ENST00000593128 BROXQ5VW32 411 aa18.06■□□□□ 0.48
CIRBP-243ENST00000593128 FSTL5Q8N475 847 aaPredicted RBP18.06■□□□□ 0.48
CIRBP-243ENST00000593128 NPWQ8N729 165 aa18.06■□□□□ 0.48
CIRBP-243ENST00000593128 KYQ8NBH2 561 aa18.06■□□□□ 0.48
CIRBP-243ENST00000593128 HCAR2Q8TDS4 363 aa18.06■□□□□ 0.48
CIRBP-243ENST00000593128 NAT6Q93015 286 aa18.06■□□□□ 0.48
CIRBP-243ENST00000593128 TUBGCP5Q96RT8 1024 aa18.06■□□□□ 0.48
CIRBP-243ENST00000593128 SYT11Q9BT88 431 aa18.06■□□□□ 0.48
CIRBP-243ENST00000593128 EDEM3Q9BZQ6 932 aa18.06■□□□□ 0.48
CIRBP-243ENST00000593128 MOSPD1Q9UJG1 213 aa18.06■□□□□ 0.48
CIRBP-243ENST00000593128 BAHCC1Q9P281 2608 aa18.05■□□□□ 0.48
CIRBP-243ENST00000593128 TSPAN11A1L157 253 aa18.05■□□□□ 0.48
CIRBP-243ENST00000593128 TTC24A2A3L6 582 aaPredicted RBP18.05■□□□□ 0.48
CIRBP-243ENST00000593128 TMEM110-MUSTN1A8MSY1 372 aa18.05■□□□□ 0.48
CIRBP-243ENST00000593128 KLK10O43240 276 aa18.05■□□□□ 0.48
CIRBP-243ENST00000593128 SERPINC1P01008 464 aa18.05■□□□□ 0.48
CIRBP-243ENST00000593128 ALPIP09923 528 aa18.05■□□□□ 0.48
CIRBP-243ENST00000593128 ELFN1P0C7U0 828 aa18.05■□□□□ 0.48
CIRBP-243ENST00000593128 PEX5P50542 639 aa18.05■□□□□ 0.48
CIRBP-243ENST00000593128 SRP54P61011 504 aaKnown RBP18.05■□□□□ 0.48
CIRBP-243ENST00000593128 SPIDRQ14159 915 aa18.05■□□□□ 0.48
CIRBP-243ENST00000593128 SMTNL2Q2TAL5 461 aa18.05■□□□□ 0.48
CIRBP-243ENST00000593128 E4F1Q66K89 784 aaPredicted RBP18.05■□□□□ 0.48
CIRBP-243ENST00000593128 CAVIN1Q6NZI2 390 aaKnown RBP18.05■□□□□ 0.48
CIRBP-243ENST00000593128 GPR155Q7Z3F1 870 aa18.05■□□□□ 0.48
CIRBP-243ENST00000593128 ARHGAP12Q8IWW6 846 aa18.05■□□□□ 0.48
CIRBP-243ENST00000593128 TP53INP2Q8IXH6 220 aa18.05■□□□□ 0.48
CIRBP-243ENST00000593128 PLA2G15Q8NCC3 412 aa18.05■□□□□ 0.48
CIRBP-243ENST00000593128 ATL2Q8NHH9 583 aa18.05■□□□□ 0.48
CIRBP-243ENST00000593128 TPCN2Q8NHX9 752 aa18.05■□□□□ 0.48
CIRBP-243ENST00000593128 PDCD6IPQ8WUM4 868 aaKnown RBP18.05■□□□□ 0.48
CIRBP-243ENST00000593128 KCNE4Q8WWG9 221 aa18.05■□□□□ 0.48
CIRBP-243ENST00000593128 HSPH1Q92598 858 aa18.05■□□□□ 0.48
CIRBP-243ENST00000593128 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.05■□□□□ 0.48
CIRBP-243ENST00000593128 SUDS3Q9H7L9 328 aaPredicted RBP18.05■□□□□ 0.48
CIRBP-243ENST00000593128 ZWILCHQ9H900 591 aa18.05■□□□□ 0.48
CIRBP-243ENST00000593128 THSD1Q9NS62 852 aa18.05■□□□□ 0.48
CIRBP-243ENST00000593128 GPR34Q9UPC5 381 aa18.05■□□□□ 0.48
CIRBP-243ENST00000593128 ENTPD2Q9Y5L3 495 aa18.05■□□□□ 0.48
CIRBP-243ENST00000593128 SCINQ9Y6U3 715 aa18.05■□□□□ 0.48
CIRBP-243ENST00000593128 ASXL3Q9C0F0 2248 aa18.04■□□□□ 0.48
CIRBP-243ENST00000593128 LRP4O75096 1905 aa18.04■□□□□ 0.48
CIRBP-243ENST00000593128 EIF3CLB5ME19 914 aaKnown RBP18.04■□□□□ 0.48
CIRBP-243ENST00000593128 AGRPO00253 132 aa18.04■□□□□ 0.48
CIRBP-243ENST00000593128 DDX3XO00571 662 aaKnown RBP eCLIP18.04■□□□□ 0.481e-13■■■□□ 16.1
CIRBP-243ENST00000593128 LRCH4O75427 683 aa18.04■□□□□ 0.48
CIRBP-243ENST00000593128 TNFP01375 233 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms