RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 REXO1L1PQ8IX06 675 aa6.51□□□□□ -1.37
VPS4B-205ENST00000591383 TP53INP2Q8IXH6 220 aa6.51□□□□□ -1.37
VPS4B-205ENST00000591383 UMODL1-AS1Q8N2C9 162 aa6.51□□□□□ -1.37
VPS4B-205ENST00000591383 RYBPQ8N488 228 aaPredicted RBP6.51□□□□□ -1.37
VPS4B-205ENST00000591383 LZTR1Q8N653 840 aa6.51□□□□□ -1.37
VPS4B-205ENST00000591383 PQLC3Q8N755 202 aa6.51□□□□□ -1.37
VPS4B-205ENST00000591383 DTWD2Q8NBA8 298 aa6.51□□□□□ -1.37
VPS4B-205ENST00000591383 OR6K2Q8NGY2 324 aa6.51□□□□□ -1.37
VPS4B-205ENST00000591383 ZNF417Q8TAU3 575 aa6.51□□□□□ -1.37
VPS4B-205ENST00000591383 FAM71BQ8TC56 605 aa6.51□□□□□ -1.37
VPS4B-205ENST00000591383 HMGB4Q8WW32 186 aa6.51□□□□□ -1.37
VPS4B-205ENST00000591383 ARHGEF2Q92974 986 aaKnown RBP6.51□□□□□ -1.37
VPS4B-205ENST00000591383 CLDN23Q96B33 292 aa6.51□□□□□ -1.37
VPS4B-205ENST00000591383 FAF2Q96CS3 445 aa6.51□□□□□ -1.37
VPS4B-205ENST00000591383 ALG14Q96F25 216 aa6.51□□□□□ -1.37
VPS4B-205ENST00000591383 EXOC2Q96KP1 924 aa6.51□□□□□ -1.37
VPS4B-205ENST00000591383 LMLNQ96KR4 655 aa6.51□□□□□ -1.37
VPS4B-205ENST00000591383 CCDC114Q96M63 670 aa6.51□□□□□ -1.37
VPS4B-205ENST00000591383 RNF157Q96PX1 679 aa6.51□□□□□ -1.37
VPS4B-205ENST00000591383 ZNF587Q96SQ5 575 aaPredicted RBP6.51□□□□□ -1.37
VPS4B-205ENST00000591383 FAM118BQ9BPY3 351 aa6.51□□□□□ -1.37
VPS4B-205ENST00000591383 IER2Q9BTL4 223 aa6.51□□□□□ -1.37
VPS4B-205ENST00000591383 CINPQ9BW66 212 aaPredicted RBP6.51□□□□□ -1.37
VPS4B-205ENST00000591383 OSBPL8Q9BZF1 889 aa6.51□□□□□ -1.37
VPS4B-205ENST00000591383 SLC39A8Q9C0K1 460 aa6.51□□□□□ -1.37
VPS4B-205ENST00000591383 KLC2Q9H0B6 622 aa6.51□□□□□ -1.37
VPS4B-205ENST00000591383 MTG2Q9H4K7 406 aa6.51□□□□□ -1.37
VPS4B-205ENST00000591383 LRRC19Q9H756 370 aa6.51□□□□□ -1.37
VPS4B-205ENST00000591383 C2orf42Q9NWW7 574 aa6.51□□□□□ -1.37
VPS4B-205ENST00000591383 SEPT10Q9P0V9 454 aa6.51□□□□□ -1.37
VPS4B-205ENST00000591383 THAP10Q9P2Z0 257 aaPredicted RBP6.51□□□□□ -1.37
VPS4B-205ENST00000591383 UBA2Q9UBT2 640 aaPredicted RBP6.51□□□□□ -1.37
VPS4B-205ENST00000591383 PLA2G4CQ9UP65 541 aa6.51□□□□□ -1.37
VPS4B-205ENST00000591383 PCDHA3Q9Y5H8 950 aa6.51□□□□□ -1.37
VPS4B-205ENST00000591383 OR51B4Q9Y5P0 310 aa6.51□□□□□ -1.37
VPS4B-205ENST00000591383 ACTL7AQ9Y615 435 aa6.51□□□□□ -1.37
VPS4B-205ENST00000591383 EDDM13A0A1B0GTR0 161 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 A0A1W2PQU0 124 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 ZSCAN5CA6NGD5 496 aaPredicted RBP6.5□□□□□ -1.37
VPS4B-205ENST00000591383 ZNF487B1APH4 448 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 WASH3PC4AMC7 463 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 J3KR12 359 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 K7ERQ8 282 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 MCF2LO15068 1137 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 NPC1O15118 1278 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 FANCGO15287 622 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 TIMM44O43615 452 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 PRAMEF11O60813 436 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 ADAM23O75077 832 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 RFPL3O75679 317 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 ALDH1A2O94788 518 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 APBB3O95704 486 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 MT-CO1P00395 513 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 S100BP04271 92 aaPredicted RBP6.5□□□□□ -1.37
VPS4B-205ENST00000591383 ATP1A1P05023 1023 aaKnown RBP6.5□□□□□ -1.37
VPS4B-205ENST00000591383 SRPRAP08240 638 aaKnown RBP6.5□□□□□ -1.37
VPS4B-205ENST00000591383 PYGMP11217 842 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 MYCLP1P12525 358 aaPredicted RBP6.5□□□□□ -1.37
VPS4B-205ENST00000591383 SRCP12931 536 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 TGM2P21980 687 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 IL4RP24394 825 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 CXCR5P32302 372 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 RECQLP46063 649 aaPredicted RBP6.5□□□□□ -1.37
VPS4B-205ENST00000591383 PLK1P53350 603 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 YBEYP58557 167 aaPredicted RBP6.5□□□□□ -1.37
VPS4B-205ENST00000591383 RHOAP61586 193 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 ID3Q02535 119 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 GALNT2Q10471 571 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 PAFAH1B3Q15102 231 aaKnown RBP6.5□□□□□ -1.37
VPS4B-205ENST00000591383 POM121L1PQ3SYA9 428 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 BBS9Q3SYG4 887 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 HSF5Q4G112 596 aaPredicted RBP6.5□□□□□ -1.37
VPS4B-205ENST00000591383 ATXN7L2Q5T6C5 722 aaPredicted RBP6.5□□□□□ -1.37
VPS4B-205ENST00000591383 AFMIDQ63HM1 303 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 TSSK4Q6SA08 328 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 B4GALNT4Q76KP1 1039 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 SYT13Q7L8C5 426 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 BMP8AQ7Z5Y6 402 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 VSIG1Q86XK7 387 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 RCOR2Q8IZ40 523 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 SPEM1Q8N4L4 309 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 SH2D3CQ8N5H7 860 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.5□□□□□ -1.37
VPS4B-205ENST00000591383 PAF1Q8N7H5 531 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 PLD5Q8N7P1 536 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 CCNYQ8ND76 341 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 NSMCE1Q8WV22 266 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 KISS1RQ969F8 398 aaPredicted RBP6.5□□□□□ -1.37
VPS4B-205ENST00000591383 TTC17Q96AE7 1141 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 HES6Q96HZ4 224 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 MRGPRX3Q96LB0 322 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 DHRS1Q96LJ7 313 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 C16orf45Q96MC5 204 aaPredicted RBP6.5□□□□□ -1.37
VPS4B-205ENST00000591383 SLC6A18Q96N87 628 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 GABRG3Q99928 467 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 HERPUD2Q9BSE4 406 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 LRFN3Q9BTN0 628 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 FAM126AQ9BYI3 521 aaPredicted RBP6.5□□□□□ -1.37
VPS4B-205ENST00000591383 CEP41Q9BYV8 373 aa6.5□□□□□ -1.37
VPS4B-205ENST00000591383 TPSD1Q9BZJ3 242 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms