RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 NUDCD1Q96RS6 583 aa12.17□□□□□ -0.46
TPM4-212ENST00000590180 LUC7LQ9NQ29 371 aaKnown RBP12.17□□□□□ -0.46
TPM4-212ENST00000590180 MBNL1Q9NR56 388 aaKnown RBP12.17□□□□□ -0.46
TPM4-212ENST00000590180 RBM22Q9NW64 420 aaKnown RBP eCLIP12.17□□□□□ -0.46
TPM4-212ENST00000590180 TDRD6O60522 2096 aaKnown RBP12.17□□□□□ -0.46
TPM4-212ENST00000590180 SPTY2D1-AS1A0A0U1RR47 76 aa12.16□□□□□ -0.46
TPM4-212ENST00000590180 ENC1O14682 589 aa12.16□□□□□ -0.46
TPM4-212ENST00000590180 MATN3O15232 486 aa12.16□□□□□ -0.46
TPM4-212ENST00000590180 KRT1P04264 644 aa12.16□□□□□ -0.46
TPM4-212ENST00000590180 C6P13671 934 aa12.16□□□□□ -0.46
TPM4-212ENST00000590180 DGKAP23743 735 aa12.16□□□□□ -0.46
TPM4-212ENST00000590180 CCNCP24863 283 aa12.16□□□□□ -0.46
TPM4-212ENST00000590180 NAP1L1P55209 391 aaKnown RBP12.16□□□□□ -0.46
TPM4-212ENST00000590180 SLC10A2Q12908 348 aaPredicted RBP12.16□□□□□ -0.46
TPM4-212ENST00000590180 FZD2Q14332 565 aa12.16□□□□□ -0.46
TPM4-212ENST00000590180 TCEAL1Q15170 157 aa12.16□□□□□ -0.46
TPM4-212ENST00000590180 KDM7AQ6ZMT4 941 aa12.16□□□□□ -0.46
TPM4-212ENST00000590180 RAB44Q7Z6P3 723 aaPredicted RBP12.16□□□□□ -0.46
TPM4-212ENST00000590180 RFX6Q8HWS3 928 aa12.16□□□□□ -0.46
TPM4-212ENST00000590180 TMTC1Q8IUR5 882 aa12.16□□□□□ -0.46
TPM4-212ENST00000590180 RHOT1Q8IXI2 618 aa12.16□□□□□ -0.46
TPM4-212ENST00000590180 SLC22A18ASQ8N1D0 253 aa12.16□□□□□ -0.46
TPM4-212ENST00000590180 SLC25A45Q8N413 288 aa12.16□□□□□ -0.46
TPM4-212ENST00000590180 FAF2Q96CS3 445 aa12.16□□□□□ -0.46
TPM4-212ENST00000590180 ECHDC3Q96DC8 303 aa12.16□□□□□ -0.46
TPM4-212ENST00000590180 ZNF830Q96NB3 372 aaPredicted RBP12.16□□□□□ -0.46
TPM4-212ENST00000590180 SEMA3CQ99985 751 aa12.16□□□□□ -0.46
TPM4-212ENST00000590180 MGME1Q9BQP7 344 aa12.16□□□□□ -0.46
TPM4-212ENST00000590180 CAAP1Q9H8G2 361 aa12.16□□□□□ -0.46
TPM4-212ENST00000590180 UCKL1Q9NWZ5 548 aa12.16□□□□□ -0.46
TPM4-212ENST00000590180 DDX56Q9NY93 547 aaKnown RBP12.16□□□□□ -0.46
TPM4-212ENST00000590180 KLK13Q9UKR3 277 aa12.16□□□□□ -0.46
TPM4-212ENST00000590180 TFR2Q9UP52 801 aa12.16□□□□□ -0.46
TPM4-212ENST00000590180 TTLL3Q9Y4R7 772 aa12.16□□□□□ -0.46
TPM4-212ENST00000590180 HEY1Q9Y5J3 304 aa12.16□□□□□ -0.46
TPM4-212ENST00000590180 ALG6Q9Y672 507 aa12.16□□□□□ -0.46
TPM4-212ENST00000590180 EPN1Q9Y6I3 576 aaPredicted RBP12.16□□□□□ -0.46
TPM4-212ENST00000590180 ARID1BQ8NFD5 2236 aaPredicted RBP12.16□□□□□ -0.46
TPM4-212ENST00000590180 A0A1W2PQ67 120 aa12.15□□□□□ -0.46
TPM4-212ENST00000590180 NEMP2A6NFY4 417 aa12.15□□□□□ -0.46
TPM4-212ENST00000590180 TRAFD1O14545 582 aaPredicted RBP12.15□□□□□ -0.46
TPM4-212ENST00000590180 APOL1O14791 398 aa12.15□□□□□ -0.46
TPM4-212ENST00000590180 FFAR2O15552 330 aa12.15□□□□□ -0.46
TPM4-212ENST00000590180 PIAS2O75928 621 aa12.15□□□□□ -0.46
TPM4-212ENST00000590180 IPO7O95373 1038 aaKnown RBP12.15□□□□□ -0.46
TPM4-212ENST00000590180 LCA5LO95447 670 aa12.15□□□□□ -0.46
TPM4-212ENST00000590180 CCNB1P14635 433 aa12.15□□□□□ -0.46
TPM4-212ENST00000590180 CR2P20023 1033 aa12.15□□□□□ -0.46
TPM4-212ENST00000590180 NFKBIAP25963 317 aa12.15□□□□□ -0.46
TPM4-212ENST00000590180 IGFALSP35858 605 aa12.15□□□□□ -0.46
TPM4-212ENST00000590180 MMP12P39900 470 aa12.15□□□□□ -0.46
TPM4-212ENST00000590180 PFN3P60673 137 aa12.15□□□□□ -0.46
TPM4-212ENST00000590180 HNRNPKP61978 463 aaKnown RBP eCLIP12.15□□□□□ -0.46
TPM4-212ENST00000590180 YPEL5P62699 121 aa12.15□□□□□ -0.46
TPM4-212ENST00000590180 DNAJC3Q13217 504 aa12.15□□□□□ -0.46
TPM4-212ENST00000590180 PTK2BQ14289 1009 aa12.15□□□□□ -0.46
TPM4-212ENST00000590180 ACOX1Q15067 660 aa12.15□□□□□ -0.46
TPM4-212ENST00000590180 WSCD2Q2TBF2 565 aa12.15□□□□□ -0.46
TPM4-212ENST00000590180 RALGPS1Q5JS13 557 aa12.15□□□□□ -0.46
TPM4-212ENST00000590180 ARMC12Q5T9G4 340 aa12.15□□□□□ -0.46
TPM4-212ENST00000590180 LRRC38Q5VT99 294 aa12.15□□□□□ -0.46
TPM4-212ENST00000590180 DENND2CQ68D51 928 aa12.15□□□□□ -0.46
TPM4-212ENST00000590180 KANSL1Q7Z3B3 1105 aa12.15□□□□□ -0.46
TPM4-212ENST00000590180 CCDC13Q8IYE1 715 aa12.15□□□□□ -0.46
TPM4-212ENST00000590180 TEX26Q8N6G2 289 aa12.15□□□□□ -0.46
TPM4-212ENST00000590180 TP53I13Q8NBR0 393 aaPredicted RBP12.15□□□□□ -0.46
TPM4-212ENST00000590180 IFT43Q96FT9 208 aa12.15□□□□□ -0.46
TPM4-212ENST00000590180 TSGA13Q96PP4 275 aa12.15□□□□□ -0.46
TPM4-212ENST00000590180 HAUS2Q9NVX0 235 aa12.15□□□□□ -0.46
TPM4-212ENST00000590180 PHTF1Q9UMS5 762 aa12.15□□□□□ -0.46
TPM4-212ENST00000590180 WASF3Q9UPY6 502 aa12.15□□□□□ -0.46
TPM4-212ENST00000590180 NEUROG3Q9Y4Z2 214 aa12.15□□□□□ -0.46
TPM4-212ENST00000590180 RAI2Q9Y5P3 530 aa12.15□□□□□ -0.46
TPM4-212ENST00000590180 CFAP69A5D8W1 941 aa12.14□□□□□ -0.47
TPM4-212ENST00000590180 SOWAHDA6NJG2 315 aa12.14□□□□□ -0.47
TPM4-212ENST00000590180 H3BM21 787 aa12.14□□□□□ -0.47
TPM4-212ENST00000590180 TRIM38O00635 465 aa12.14□□□□□ -0.47
TPM4-212ENST00000590180 HTRA2O43464 458 aaPredicted RBP12.14□□□□□ -0.47
TPM4-212ENST00000590180 SIGLEC6O43699 453 aa12.14□□□□□ -0.47
TPM4-212ENST00000590180 SOCS5O75159 536 aa12.14□□□□□ -0.47
TPM4-212ENST00000590180 RECQL5O94762 991 aaPredicted RBP12.14□□□□□ -0.47
TPM4-212ENST00000590180 CPP00450 1065 aa12.14□□□□□ -0.47
TPM4-212ENST00000590180 JCHAINP01591 159 aa12.14□□□□□ -0.47
TPM4-212ENST00000590180 CSF2P04141 144 aa12.14□□□□□ -0.47
TPM4-212ENST00000590180 PCCBP05166 539 aa12.14□□□□□ -0.47
TPM4-212ENST00000590180 ELFN1P0C7U0 828 aa12.14□□□□□ -0.47
TPM4-212ENST00000590180 CYP2A6P11509 494 aaPredicted RBP12.14□□□□□ -0.47
TPM4-212ENST00000590180 ZFXP17010 805 aaPredicted RBP12.14□□□□□ -0.47
TPM4-212ENST00000590180 JUNDP17535 347 aa12.14□□□□□ -0.47
TPM4-212ENST00000590180 CES1P23141 567 aa12.14□□□□□ -0.47
TPM4-212ENST00000590180 DYNLT1P63172 113 aa12.14□□□□□ -0.47
TPM4-212ENST00000590180 DAB2P98082 770 aa12.14□□□□□ -0.47
TPM4-212ENST00000590180 AP1B1Q10567 949 aa12.14□□□□□ -0.47
TPM4-212ENST00000590180 TRAF2Q12933 501 aa12.14□□□□□ -0.47
TPM4-212ENST00000590180 INPP5AQ14642 412 aa12.14□□□□□ -0.47
TPM4-212ENST00000590180 IRF4Q15306 451 aa12.14□□□□□ -0.47
TPM4-212ENST00000590180 LLGL1Q15334 1064 aa12.14□□□□□ -0.47
TPM4-212ENST00000590180 TPRG1LQ5T0D9 272 aa12.14□□□□□ -0.47
TPM4-212ENST00000590180 FAXCQ5TGI0 409 aa12.14□□□□□ -0.47
TPM4-212ENST00000590180 LIPIQ6XZB0 460 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms