RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 THOP1P52888 689 aa20.73■□□□□ 0.91
CIRBP-226ENST00000590171 ADKP55263 362 aaKnown RBP20.73■□□□□ 0.91
CIRBP-226ENST00000590171 YPEL5P62699 121 aa20.73■□□□□ 0.91
CIRBP-226ENST00000590171 RALGDSQ12967 914 aa20.73■□□□□ 0.91
CIRBP-226ENST00000590171 ILKQ13418 452 aa20.73■□□□□ 0.91
CIRBP-226ENST00000590171 CAMK2BQ13554 666 aa20.73■□□□□ 0.91
CIRBP-226ENST00000590171 DPYSL3Q14195 570 aa20.73■□□□□ 0.91
CIRBP-226ENST00000590171 LRRC14Q15048 493 aa20.73■□□□□ 0.91
CIRBP-226ENST00000590171 WSCD2Q2TBF2 565 aa20.73■□□□□ 0.91
CIRBP-226ENST00000590171 HS1BP3Q53T59 392 aa20.73■□□□□ 0.91
CIRBP-226ENST00000590171 PNMA8BQ9ULN7 279 aaPredicted RBP20.73■□□□□ 0.91
CIRBP-226ENST00000590171 NEMP2A6NFY4 417 aa20.72■□□□□ 0.91
CIRBP-226ENST00000590171 SRRM3A6NNA2 597 aaPredicted RBP20.72■□□□□ 0.91
CIRBP-226ENST00000590171 TAF4O00268 1085 aa20.72■□□□□ 0.91
CIRBP-226ENST00000590171 MFSD11O43934 449 aa20.72■□□□□ 0.91
CIRBP-226ENST00000590171 AKR1B10O60218 316 aa20.72■□□□□ 0.91
CIRBP-226ENST00000590171 TPM1P09493 284 aa20.72■□□□□ 0.91
CIRBP-226ENST00000590171 ALPPL2P10696 532 aa20.72■□□□□ 0.91
CIRBP-226ENST00000590171 JUNDP17535 347 aa20.72■□□□□ 0.91
CIRBP-226ENST00000590171 HSPA9P38646 679 aaKnown RBP20.72■□□□□ 0.91
CIRBP-226ENST00000590171 DAB2P98082 770 aa20.72■□□□□ 0.91
CIRBP-226ENST00000590171 PTK2BQ14289 1009 aa20.72■□□□□ 0.91
CIRBP-226ENST00000590171 AGERQ15109 404 aa20.72■□□□□ 0.91
CIRBP-226ENST00000590171 TSR1Q2NL82 804 aaKnown RBP20.72■□□□□ 0.91
CIRBP-226ENST00000590171 NCBP2-AS2Q69YL0 99 aa20.72■□□□□ 0.91
CIRBP-226ENST00000590171 PROSER1Q86XN7 944 aa20.72■□□□□ 0.91
CIRBP-226ENST00000590171 RBFAQ8N0V3 343 aa20.72■□□□□ 0.91
CIRBP-226ENST00000590171 PAF1Q8N7H5 531 aa20.72■□□□□ 0.91
CIRBP-226ENST00000590171 PCDH19Q8TAB3 1148 aa20.72■□□□□ 0.91
CIRBP-226ENST00000590171 MDM1Q8TC05 714 aa20.72■□□□□ 0.91
CIRBP-226ENST00000590171 NUDCD1Q96RS6 583 aa20.72■□□□□ 0.91
CIRBP-226ENST00000590171 MGME1Q9BQP7 344 aa20.72■□□□□ 0.91
CIRBP-226ENST00000590171 TCEAL2Q9H3H9 227 aaPredicted RBP20.72■□□□□ 0.91
CIRBP-226ENST00000590171 SPTLC3Q9NUV7 552 aa20.72■□□□□ 0.91
CIRBP-226ENST00000590171 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.71■□□□□ 0.91
CIRBP-226ENST00000590171 K7ESM1 405 aa20.71■□□□□ 0.91
CIRBP-226ENST00000590171 TOR1BO14657 336 aa20.71■□□□□ 0.91
CIRBP-226ENST00000590171 MAXP61244 160 aa20.71■□□□□ 0.91
CIRBP-226ENST00000590171 HES3Q5TGS1 186 aa20.71■□□□□ 0.91
CIRBP-226ENST00000590171 MACC1Q6ZN28 852 aa20.71■□□□□ 0.91
CIRBP-226ENST00000590171 APOLD1Q96LR9 279 aa20.71■□□□□ 0.91
CIRBP-226ENST00000590171 ZNF670Q9BS34 389 aa20.71■□□□□ 0.91
CIRBP-226ENST00000590171 CCDC86Q9H6F5 360 aaKnown RBP20.71■□□□□ 0.91
CIRBP-226ENST00000590171 NHEJ1Q9H9Q4 299 aaPredicted RBP20.71■□□□□ 0.91
CIRBP-226ENST00000590171 APOBEC3BQ9UH17 382 aaKnown RBP20.71■□□□□ 0.91
CIRBP-226ENST00000590171 LCMT1Q9UIC8 334 aa20.71■□□□□ 0.91
CIRBP-226ENST00000590171 PCDHGC4Q9Y5F7 938 aa20.71■□□□□ 0.91
CIRBP-226ENST00000590171 LY6G6EA0A0G2JKS1 128 aa20.7■□□□□ 0.9
CIRBP-226ENST00000590171 CFAP69A5D8W1 941 aa20.7■□□□□ 0.9
CIRBP-226ENST00000590171 TRABD2BA6NFA1 517 aa20.7■□□□□ 0.9
CIRBP-226ENST00000590171 TMEM110-MUSTN1A8MSY1 372 aa20.7■□□□□ 0.9
CIRBP-226ENST00000590171 AQP9O43315 295 aa20.7■□□□□ 0.9
CIRBP-226ENST00000590171 HTRA2O43464 458 aaPredicted RBP20.7■□□□□ 0.9
CIRBP-226ENST00000590171 LZTS3O60299 673 aaPredicted RBP20.7■□□□□ 0.9
CIRBP-226ENST00000590171 SOCS5O75159 536 aa20.7■□□□□ 0.9
CIRBP-226ENST00000590171 CKMT1AP12532 417 aa20.7■□□□□ 0.9
CIRBP-226ENST00000590171 MYF5P13349 255 aa20.7■□□□□ 0.9
CIRBP-226ENST00000590171 MAN1A1P33908 653 aa20.7■□□□□ 0.9
CIRBP-226ENST00000590171 HNF1BP35680 557 aa20.7■□□□□ 0.9
CIRBP-226ENST00000590171 MMP13P45452 471 aa20.7■□□□□ 0.9
CIRBP-226ENST00000590171 POLR2LP62875 67 aaKnown RBP20.7■□□□□ 0.9
CIRBP-226ENST00000590171 PAFAH1B3Q15102 231 aaKnown RBP20.7■□□□□ 0.9
CIRBP-226ENST00000590171 PDK2Q15119 407 aa20.7■□□□□ 0.9
CIRBP-226ENST00000590171 ANKRD20A8PQ5CZ79 823 aa20.7■□□□□ 0.9
CIRBP-226ENST00000590171 MARC1Q5VT66 337 aa20.7■□□□□ 0.9
CIRBP-226ENST00000590171 LIPIQ6XZB0 460 aa20.7■□□□□ 0.9
CIRBP-226ENST00000590171 DPPA4Q7L190 304 aa20.7■□□□□ 0.9
CIRBP-226ENST00000590171 PHACTR4Q8IZ21 702 aa20.7■□□□□ 0.9
CIRBP-226ENST00000590171 BBS5Q8N3I7 341 aa20.7■□□□□ 0.9
CIRBP-226ENST00000590171 KCTD6Q8NC69 237 aa20.7■□□□□ 0.9
CIRBP-226ENST00000590171 LMX1AQ8TE12 382 aa20.7■□□□□ 0.9
CIRBP-226ENST00000590171 NSMCE1Q8WV22 266 aa20.7■□□□□ 0.9
CIRBP-226ENST00000590171 BTN2A2Q8WVV5 523 aa20.7■□□□□ 0.9
CIRBP-226ENST00000590171 SPOCK2Q92563 424 aa20.7■□□□□ 0.9
CIRBP-226ENST00000590171 CCDC42Q96M95 316 aa20.7■□□□□ 0.9
CIRBP-226ENST00000590171 DUSP23Q9BVJ7 150 aa20.7■□□□□ 0.9
CIRBP-226ENST00000590171 NOD2Q9HC29 1040 aa20.7■□□□□ 0.9
CIRBP-226ENST00000590171 SCUBE2Q9NQ36 999 aa20.7■□□□□ 0.9
CIRBP-226ENST00000590171 CSNK1G3Q9Y6M4 447 aa20.7■□□□□ 0.9
CIRBP-226ENST00000590171 U3KQA8 63 aa20.7■□□□□ 0.9
CIRBP-226ENST00000590171 ZFHX4Q86UP3 3567 aa20.7■□□□□ 0.9
CIRBP-226ENST00000590171 ARID1BQ8NFD5 2236 aaPredicted RBP20.69■□□□□ 0.9
CIRBP-226ENST00000590171 RECQL5O94762 991 aaPredicted RBP20.69■□□□□ 0.9
CIRBP-226ENST00000590171 MAP3K6O95382 1288 aa20.69■□□□□ 0.9
CIRBP-226ENST00000590171 PCCBP05166 539 aa20.69■□□□□ 0.9
CIRBP-226ENST00000590171 KRT7P08729 469 aa20.69■□□□□ 0.9
CIRBP-226ENST00000590171 ELFN1P0C7U0 828 aa20.69■□□□□ 0.9
CIRBP-226ENST00000590171 JUPP14923 745 aa20.69■□□□□ 0.9
CIRBP-226ENST00000590171 GARSP41250 739 aaKnown RBP20.69■□□□□ 0.9
CIRBP-226ENST00000590171 GALNT2Q10471 571 aa20.69■□□□□ 0.9
CIRBP-226ENST00000590171 TRAF2Q12933 501 aa20.69■□□□□ 0.9
CIRBP-226ENST00000590171 TBX2Q13207 712 aaPredicted RBP20.69■□□□□ 0.9
CIRBP-226ENST00000590171 INPP5AQ14642 412 aa20.69■□□□□ 0.9
CIRBP-226ENST00000590171 MESDQ14696 234 aa20.69■□□□□ 0.9
CIRBP-226ENST00000590171 LRRC49Q8IUZ0 686 aa20.69■□□□□ 0.9
CIRBP-226ENST00000590171 FAM181AQ8N9Y4 354 aa20.69■□□□□ 0.9
CIRBP-226ENST00000590171 SLC35G2Q8TBE7 412 aa20.69■□□□□ 0.9
CIRBP-226ENST00000590171 FAF2Q96CS3 445 aa20.69■□□□□ 0.9
CIRBP-226ENST00000590171 LRRC61Q9BV99 259 aa20.69■□□□□ 0.9
CIRBP-226ENST00000590171 A8MX80 341 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms