RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 LPCAT2Q7L5N7 544 aa19.72■□□□□ 0.75
CIRBP-220ENST00000588917 TBC1D3Q8IZP1 549 aaPredicted RBP19.72■□□□□ 0.75
CIRBP-220ENST00000588917 DCLK2Q8N568 766 aa19.72■□□□□ 0.75
CIRBP-220ENST00000588917 FEM1CQ96JP0 617 aa19.72■□□□□ 0.75
CIRBP-220ENST00000588917 ZC3H10Q96K80 434 aaKnown RBP19.72■□□□□ 0.75
CIRBP-220ENST00000588917 TDRD1Q9BXT4 1180 aaKnown RBP19.72■□□□□ 0.75
CIRBP-220ENST00000588917 PREBQ9HCU5 417 aa19.72■□□□□ 0.75
CIRBP-220ENST00000588917 SERGEFQ9UGK8 458 aa19.72■□□□□ 0.75
CIRBP-220ENST00000588917 CDC23Q9UJX2 597 aa19.72■□□□□ 0.75
CIRBP-220ENST00000588917 INVSQ9Y283 1065 aa19.72■□□□□ 0.75
CIRBP-220ENST00000588917 SHROOM3Q8TF72 1996 aa19.72■□□□□ 0.75
CIRBP-220ENST00000588917 UPK3BL1B0FP48 263 aa19.71■□□□□ 0.75
CIRBP-220ENST00000588917 UPK3BL2E5RIL1 263 aa19.71■□□□□ 0.75
CIRBP-220ENST00000588917 NEMP1O14524 444 aa19.71■□□□□ 0.75
CIRBP-220ENST00000588917 FZD6O60353 706 aa19.71■□□□□ 0.75
CIRBP-220ENST00000588917 CPP00450 1065 aa19.71■□□□□ 0.75
CIRBP-220ENST00000588917 ACSL1P33121 698 aa19.71■□□□□ 0.75
CIRBP-220ENST00000588917 DEKP35659 375 aaKnown RBP19.71■□□□□ 0.75
CIRBP-220ENST00000588917 FDFT1P37268 417 aa19.71■□□□□ 0.75
CIRBP-220ENST00000588917 KCNJ1P48048 391 aa19.71■□□□□ 0.75
CIRBP-220ENST00000588917 GDF10P55107 478 aa19.71■□□□□ 0.75
CIRBP-220ENST00000588917 RPL6Q02878 288 aaKnown RBP19.71■□□□□ 0.75
CIRBP-220ENST00000588917 CDK18Q07002 472 aa19.71■□□□□ 0.75
CIRBP-220ENST00000588917 CKAP4Q07065 602 aaKnown RBP19.71■□□□□ 0.75
CIRBP-220ENST00000588917 TRAF2Q12933 501 aa19.71■□□□□ 0.75
CIRBP-220ENST00000588917 SPATA22Q8NHS9 363 aa19.71■□□□□ 0.75
CIRBP-220ENST00000588917 SRPK1Q96SB4 655 aaKnown RBP19.71■□□□□ 0.75
CIRBP-220ENST00000588917 GPR174Q9BXC1 333 aa19.71■□□□□ 0.75
CIRBP-220ENST00000588917 DUSP15Q9H1R2 295 aaPredicted RBP19.71■□□□□ 0.75
CIRBP-220ENST00000588917 SMARCAL1Q9NZC9 954 aa19.71■□□□□ 0.75
CIRBP-220ENST00000588917 PPIL1Q9Y3C6 166 aa19.71■□□□□ 0.75
CIRBP-220ENST00000588917 FADS3Q9Y5Q0 445 aa19.71■□□□□ 0.75
CIRBP-220ENST00000588917 GAS8O95995 478 aa19.7■□□□□ 0.74
CIRBP-220ENST00000588917 MT-CYBP00156 380 aaPredicted RBP19.7■□□□□ 0.74
CIRBP-220ENST00000588917 ADPRHP54922 357 aa19.7■□□□□ 0.74
CIRBP-220ENST00000588917 PUM1Q14671 1186 aaKnown RBP eCLIP19.7■□□□□ 0.74
CIRBP-220ENST00000588917 SYCP2LQ5T4T6 812 aa19.7■□□□□ 0.74
CIRBP-220ENST00000588917 DGLUCYQ7Z3D6 616 aa19.7■□□□□ 0.74
CIRBP-220ENST00000588917 FAM160A2Q8N612 972 aaPredicted RBP19.7■□□□□ 0.74
CIRBP-220ENST00000588917 SCRN2Q96FV2 425 aa19.7■□□□□ 0.74
CIRBP-220ENST00000588917 NSMCE3Q96MG7 304 aa19.7■□□□□ 0.74
CIRBP-220ENST00000588917 PCYOX1Q9UHG3 505 aa19.7■□□□□ 0.74
CIRBP-220ENST00000588917 MBD1Q9UIS9 605 aaPredicted RBP19.7■□□□□ 0.74
CIRBP-220ENST00000588917 RAB23Q9ULC3 237 aa19.7■□□□□ 0.74
CIRBP-220ENST00000588917 CHKBQ9Y259 395 aa19.7■□□□□ 0.74
CIRBP-220ENST00000588917 FAM47DPA6NHR8 397 aa19.69■□□□□ 0.74
CIRBP-220ENST00000588917 ERI2A8K979 691 aaKnown RBP19.69■□□□□ 0.74
CIRBP-220ENST00000588917 ANKRD66B4E2M5 251 aa19.69■□□□□ 0.74
CIRBP-220ENST00000588917 PLK4O00444 970 aa19.69■□□□□ 0.74
CIRBP-220ENST00000588917 RIOK3O14730 519 aaKnown RBP19.69■□□□□ 0.74
CIRBP-220ENST00000588917 AREL1O15033 823 aa19.69■□□□□ 0.74
CIRBP-220ENST00000588917 PMPCBO75439 489 aa19.69■□□□□ 0.74
CIRBP-220ENST00000588917 PCDH8O95206 1070 aa19.69■□□□□ 0.74
CIRBP-220ENST00000588917 CYP2A6P11509 494 aaPredicted RBP19.69■□□□□ 0.74
CIRBP-220ENST00000588917 PSMB4P28070 264 aa19.69■□□□□ 0.74
CIRBP-220ENST00000588917 NUDT1P36639 197 aa19.69■□□□□ 0.74
CIRBP-220ENST00000588917 GRIA4P48058 902 aa19.69■□□□□ 0.74
CIRBP-220ENST00000588917 CCR5P51681 352 aa19.69■□□□□ 0.74
CIRBP-220ENST00000588917 WHAMMP3Q1A5X7 153 aa19.69■□□□□ 0.74
CIRBP-220ENST00000588917 USP45Q70EL2 814 aa19.69■□□□□ 0.74
CIRBP-220ENST00000588917 FRMD1Q8N878 549 aa19.69■□□□□ 0.74
CIRBP-220ENST00000588917 CCHCR1Q8TD31 782 aa19.69■□□□□ 0.74
CIRBP-220ENST00000588917 PIH1D2Q8WWB5 315 aa19.69■□□□□ 0.74
CIRBP-220ENST00000588917 FSD1LQ9BXM9 530 aa19.69■□□□□ 0.74
CIRBP-220ENST00000588917 CD93Q9NPY3 652 aa19.69■□□□□ 0.74
CIRBP-220ENST00000588917 UBP1Q9NZI7 540 aa19.69■□□□□ 0.74
CIRBP-220ENST00000588917 NCDNQ9UBB6 729 aa19.69■□□□□ 0.74
CIRBP-220ENST00000588917 FANCMQ8IYD8 2048 aa19.68■□□□□ 0.74
CIRBP-220ENST00000588917 LOC285095A0A1B0GVY8 99 aa19.68■□□□□ 0.74
CIRBP-220ENST00000588917 METTL12A8MUP2 240 aa19.68■□□□□ 0.74
CIRBP-220ENST00000588917 ZNF500O60304 480 aaPredicted RBP19.68■□□□□ 0.74
CIRBP-220ENST00000588917 ECEL1O95672 775 aa19.68■□□□□ 0.74
CIRBP-220ENST00000588917 NDST3O95803 873 aa19.68■□□□□ 0.74
CIRBP-220ENST00000588917 PDHA1P08559 390 aa19.68■□□□□ 0.74
CIRBP-220ENST00000588917 DPP6P42658 865 aa19.68■□□□□ 0.74
CIRBP-220ENST00000588917 WNT3AP56704 352 aa19.68■□□□□ 0.74
CIRBP-220ENST00000588917 TAS2R38P59533 333 aa19.68■□□□□ 0.74
CIRBP-220ENST00000588917 RPS21P63220 83 aaKnown RBP19.68■□□□□ 0.74
CIRBP-220ENST00000588917 FAM193AP78312 1265 aa19.68■□□□□ 0.74
CIRBP-220ENST00000588917 IHHQ14623 411 aa19.68■□□□□ 0.74
CIRBP-220ENST00000588917 PCSK7Q16549 785 aa19.68■□□□□ 0.74
CIRBP-220ENST00000588917 PLK5Q496M5 336 aa19.68■□□□□ 0.74
CIRBP-220ENST00000588917 TMEM52BQ4KMG9 183 aa19.68■□□□□ 0.74
CIRBP-220ENST00000588917 KIAA1161Q6NSJ0 714 aa19.68■□□□□ 0.74
CIRBP-220ENST00000588917 TTC27Q6P3X3 843 aa19.68■□□□□ 0.74
CIRBP-220ENST00000588917 SYDE1Q6ZW31 735 aaPredicted RBP19.68■□□□□ 0.74
CIRBP-220ENST00000588917 SPATA4Q8NEY3 305 aa19.68■□□□□ 0.74
CIRBP-220ENST00000588917 SLCO2A1Q92959 643 aa19.68■□□□□ 0.74
CIRBP-220ENST00000588917 LOXL4Q96JB6 756 aa19.68■□□□□ 0.74
CIRBP-220ENST00000588917 MLPHQ9BV36 600 aaPredicted RBP19.68■□□□□ 0.74
CIRBP-220ENST00000588917 EPC1Q9H2F5 836 aa19.68■□□□□ 0.74
CIRBP-220ENST00000588917 PCDH12Q9NPG4 1184 aa19.68■□□□□ 0.74
CIRBP-220ENST00000588917 CEP250Q9BV73 2442 aa19.67■□□□□ 0.74
CIRBP-220ENST00000588917 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.67■□□□□ 0.74
CIRBP-220ENST00000588917 A0A0J9YYE9 177 aa19.67■□□□□ 0.74
CIRBP-220ENST00000588917 E7EVH7 732 aa19.67■□□□□ 0.74
CIRBP-220ENST00000588917 PDE2AO00408 941 aaPredicted RBP19.67■□□□□ 0.74
CIRBP-220ENST00000588917 METTL18O95568 372 aa19.67■□□□□ 0.74
CIRBP-220ENST00000588917 PRLP01236 227 aa19.67■□□□□ 0.74
CIRBP-220ENST00000588917 TRBC1P01850 177 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms