RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 BRSK1Q8TDC3 778 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 PDCD6IPQ8WUM4 868 aaKnown RBP11.48□□□□□ -0.57
SMAD4-205ENST00000588745 ELSPBP1Q96BH3 223 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 ALKBH8Q96BT7 664 aaKnown RBP11.48□□□□□ -0.57
SMAD4-205ENST00000588745 AGAP2Q99490 1192 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 RBBP8Q99708 897 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 FAM167BQ9BTA0 163 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 ATP13A3Q9H7F0 1226 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 KCNK9Q9NPC2 374 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 GGT7Q9UJ14 662 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 RIMKLBQ9ULI2 386 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 ERVW-1Q9UQF0 538 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 SPO11Q9Y5K1 396 aa11.48□□□□□ -0.57
SMAD4-205ENST00000588745 MUC22E2RYF6 1773 aaPredicted RBP11.48□□□□□ -0.57
SMAD4-205ENST00000588745 HMX2A2RU54 273 aa11.47□□□□□ -0.57
SMAD4-205ENST00000588745 FAM47DPA6NHR8 397 aa11.47□□□□□ -0.57
SMAD4-205ENST00000588745 ANKRD66B4E2M5 251 aa11.47□□□□□ -0.57
SMAD4-205ENST00000588745 SLC7A4O43246 635 aa11.47□□□□□ -0.57
SMAD4-205ENST00000588745 HTRA2O43464 458 aaPredicted RBP11.47□□□□□ -0.57
SMAD4-205ENST00000588745 SPAG7O75391 227 aa11.47□□□□□ -0.57
SMAD4-205ENST00000588745 PGLSO95336 258 aa11.47□□□□□ -0.57
SMAD4-205ENST00000588745 PIGNO95427 931 aa11.47□□□□□ -0.57
SMAD4-205ENST00000588745 CRTAMO95727 393 aa11.47□□□□□ -0.57
SMAD4-205ENST00000588745 ITGA2BP08514 1039 aa11.47□□□□□ -0.57
SMAD4-205ENST00000588745 PIRTP0C851 137 aa11.47□□□□□ -0.57
SMAD4-205ENST00000588745 LAMP2P13473 410 aa11.47□□□□□ -0.57
SMAD4-205ENST00000588745 KRT4P19013 534 aa11.47□□□□□ -0.57
SMAD4-205ENST00000588745 POU3F3P20264 500 aaPredicted RBP11.47□□□□□ -0.57
SMAD4-205ENST00000588745 SERPINA4P29622 427 aa11.47□□□□□ -0.57
SMAD4-205ENST00000588745 LTBRP36941 435 aa11.47□□□□□ -0.57
SMAD4-205ENST00000588745 CCNFP41002 786 aa11.47□□□□□ -0.57
SMAD4-205ENST00000588745 VASPP50552 380 aaPredicted RBP11.47□□□□□ -0.57
SMAD4-205ENST00000588745 ZNF140P52738 457 aaPredicted RBP11.47□□□□□ -0.57
SMAD4-205ENST00000588745 LIMK2P53671 638 aa11.47□□□□□ -0.57
SMAD4-205ENST00000588745 RPL26P61254 145 aaKnown RBP11.47□□□□□ -0.57
SMAD4-205ENST00000588745 PPARDQ03181 441 aa11.47□□□□□ -0.57
SMAD4-205ENST00000588745 DNAJC3Q13217 504 aa11.47□□□□□ -0.57
SMAD4-205ENST00000588745 THOC5Q13769 683 aaKnown RBP11.47□□□□□ -0.57
SMAD4-205ENST00000588745 ADGRE1Q14246 886 aa11.47□□□□□ -0.57
SMAD4-205ENST00000588745 TERF2Q15554 542 aa11.47□□□□□ -0.57
SMAD4-205ENST00000588745 DLG2Q15700 870 aa11.47□□□□□ -0.57
SMAD4-205ENST00000588745 QPCTQ16769 361 aa11.47□□□□□ -0.57
SMAD4-205ENST00000588745 CARD16Q5EG05 197 aa11.47□□□□□ -0.57
SMAD4-205ENST00000588745 ARMC12Q5T9G4 340 aa11.47□□□□□ -0.57
SMAD4-205ENST00000588745 GRAMD4Q6IC98 578 aa11.47□□□□□ -0.57
SMAD4-205ENST00000588745 EP400NLQ6ZTU2 488 aa11.47□□□□□ -0.57
SMAD4-205ENST00000588745 GLT6D1Q7Z4J2 308 aa11.47□□□□□ -0.57
SMAD4-205ENST00000588745 STRA8Q7Z7C7 330 aa11.47□□□□□ -0.57
SMAD4-205ENST00000588745 CAMK1DQ8IU85 385 aa11.47□□□□□ -0.57
SMAD4-205ENST00000588745 RYBPQ8N488 228 aaPredicted RBP11.47□□□□□ -0.57
SMAD4-205ENST00000588745 ANKRD42Q8N9B4 389 aa11.47□□□□□ -0.57
SMAD4-205ENST00000588745 SERAC1Q96JX3 654 aa11.47□□□□□ -0.57
SMAD4-205ENST00000588745 MSLNLQ96KJ4 702 aa11.47□□□□□ -0.57
SMAD4-205ENST00000588745 MRGPRX3Q96LB0 322 aa11.47□□□□□ -0.57
SMAD4-205ENST00000588745 TUBGCP5Q96RT8 1024 aa11.47□□□□□ -0.57
SMAD4-205ENST00000588745 KLF6Q99612 283 aaPredicted RBP11.47□□□□□ -0.57
SMAD4-205ENST00000588745 POMKQ9H5K3 350 aa11.47□□□□□ -0.57
SMAD4-205ENST00000588745 INTS9Q9NV88 658 aaKnown RBP11.47□□□□□ -0.57
SMAD4-205ENST00000588745 HACD3Q9P035 362 aa11.47□□□□□ -0.57
SMAD4-205ENST00000588745 RPL26L1Q9UNX3 145 aaKnown RBP11.47□□□□□ -0.57
SMAD4-205ENST00000588745 PCDHB9Q9Y5E1 797 aa11.47□□□□□ -0.57
SMAD4-205ENST00000588745 OTOL1A6NHN0 477 aaPredicted RBP11.46□□□□□ -0.57
SMAD4-205ENST00000588745 GOLGA8TH3BQL2 631 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 TRAFD1O14545 582 aaPredicted RBP11.46□□□□□ -0.57
SMAD4-205ENST00000588745 TIMM44O43615 452 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 TYROBPO43914 113 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 ECI2O75521 394 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 RFPL1O75677 317 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 RPP40O75818 363 aaKnown RBP11.46□□□□□ -0.57
SMAD4-205ENST00000588745 SRPRAP08240 638 aaKnown RBP11.46□□□□□ -0.57
SMAD4-205ENST00000588745 PSMC3P17980 439 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 GKP32189 559 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 SPRP35270 261 aaPredicted RBP11.46□□□□□ -0.57
SMAD4-205ENST00000588745 SLC1A2P43004 574 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 ARSDP51689 593 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 CCNHP51946 323 aaPredicted RBP11.46□□□□□ -0.57
SMAD4-205ENST00000588745 SLC18A1P54219 525 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 EPHB1P54762 984 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 SLC18A2Q05940 514 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 MPP2Q14168 576 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 GRM2Q14416 872 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 TAF1AQ15573 450 aaPredicted RBP11.46□□□□□ -0.57
SMAD4-205ENST00000588745 UGP2Q16851 508 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 MYLK3Q32MK0 819 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 ACCSLQ4AC99 568 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 MROH9Q5TGP6 573 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 TTC19Q6DKK2 380 aaPredicted RBP11.46□□□□□ -0.57
SMAD4-205ENST00000588745 ZNF470Q6ECI4 717 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 TIFABQ6ZNK6 161 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 Q6ZVU0 165 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 LMNTD2Q8IXW0 634 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 BANPQ8N9N5 519 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 MDGA1Q8NFP4 955 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 GABPB2Q8TAK5 448 aaPredicted RBP11.46□□□□□ -0.57
SMAD4-205ENST00000588745 CALML6Q8TD86 181 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 STYXQ8WUJ0 223 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 CYB5D2Q8WUJ1 264 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 PIH1D2Q8WWB5 315 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 ATXN2LQ8WWM7 1075 aaKnown RBP11.46□□□□□ -0.57
SMAD4-205ENST00000588745 FGF14Q92915 247 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms