RNA–Protein interactions for RNA: ENST00000588200.1

PKN1-211, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-211	ENST00000588200	TMCO4	Q5TGY1	634 aa		13.45	□□□□□ -0.26
PKN1-211	ENST00000588200	ESRP1	Q6NXG1	681 aa	Known RBP	13.45	□□□□□ -0.26
PKN1-211	ENST00000588200	ERAP2	Q6P179	960 aa		13.45	□□□□□ -0.26
PKN1-211	ENST00000588200	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	13.45	□□□□□ -0.26
PKN1-211	ENST00000588200	EFL1	Q7Z2Z2	1120 aa	Known RBP	13.45	□□□□□ -0.26
PKN1-211	ENST00000588200	GPR155	Q7Z3F1	870 aa		13.45	□□□□□ -0.26
PKN1-211	ENST00000588200	VPS36	Q86VN1	386 aa		13.45	□□□□□ -0.26
PKN1-211	ENST00000588200	ZNF354C	Q86Y25	554 aa		13.45	□□□□□ -0.26
PKN1-211	ENST00000588200	ARHGAP12	Q8IWW6	846 aa		13.45	□□□□□ -0.26
PKN1-211	ENST00000588200	RBFA	Q8N0V3	343 aa		13.45	□□□□□ -0.26
PKN1-211	ENST00000588200	ATL2	Q8NHH9	583 aa		13.45	□□□□□ -0.26
PKN1-211	ENST00000588200	SCG3	Q8WXD2	468 aa	Known RBP	13.45	□□□□□ -0.26
PKN1-211	ENST00000588200	PRR11	Q96HE9	360 aa	Predicted RBP	13.45	□□□□□ -0.26
PKN1-211	ENST00000588200	ZNF599	Q96NL3	588 aa		13.45	□□□□□ -0.26
PKN1-211	ENST00000588200	PSKH2	Q96QS6	385 aa		13.45	□□□□□ -0.26
PKN1-211	ENST00000588200	APOO	Q9BUR5	198 aa		13.45	□□□□□ -0.26
PKN1-211	ENST00000588200	SLC39A8	Q9C0K1	460 aa		13.45	□□□□□ -0.26
PKN1-211	ENST00000588200	NAT10	Q9H0A0	1025 aa	Known RBP	13.45	□□□□□ -0.26
PKN1-211	ENST00000588200	TCEAL2	Q9H3H9	227 aa	Predicted RBP	13.45	□□□□□ -0.26
PKN1-211	ENST00000588200	ATP13A3	Q9H7F0	1226 aa		13.45	□□□□□ -0.26
PKN1-211	ENST00000588200	PCDH12	Q9NPG4	1184 aa		13.45	□□□□□ -0.26
PKN1-211	ENST00000588200	THSD1	Q9NS62	852 aa		13.45	□□□□□ -0.26
PKN1-211	ENST00000588200	SEPT11	Q9NVA2	429 aa	Known RBP	13.45	□□□□□ -0.26
PKN1-211	ENST00000588200	TAS2R14	Q9NYV8	317 aa		13.45	□□□□□ -0.26
PKN1-211	ENST00000588200	ATP8A1	Q9Y2Q0	1164 aa		13.45	□□□□□ -0.26
PKN1-211	ENST00000588200	ENTPD2	Q9Y5L3	495 aa		13.45	□□□□□ -0.26
PKN1-211	ENST00000588200	RAI2	Q9Y5P3	530 aa		13.45	□□□□□ -0.26
PKN1-211	ENST00000588200	BSN	Q9UPA5	3926 aa		13.44	□□□□□ -0.26
PKN1-211	ENST00000588200		A0A1W2PQ67	120 aa		13.44	□□□□□ -0.26
PKN1-211	ENST00000588200	CDRT15L2	A8MXV6	281 aa		13.44	□□□□□ -0.26
PKN1-211	ENST00000588200	TRAFD1	O14545	582 aa	Predicted RBP	13.44	□□□□□ -0.26
PKN1-211	ENST00000588200	TNFRSF10C	O14798	259 aa		13.44	□□□□□ -0.26
PKN1-211	ENST00000588200	TEX33	O43247	280 aa		13.44	□□□□□ -0.26
PKN1-211	ENST00000588200	RNF8	O76064	485 aa		13.44	□□□□□ -0.26
PKN1-211	ENST00000588200	RASGRP1	O95267	797 aa		13.44	□□□□□ -0.26
PKN1-211	ENST00000588200	MPO	P05164	745 aa		13.44	□□□□□ -0.26
PKN1-211	ENST00000588200	ANXA6	P08133	673 aa		13.44	□□□□□ -0.26
PKN1-211	ENST00000588200	MYF5	P13349	255 aa		13.44	□□□□□ -0.26
PKN1-211	ENST00000588200	C6	P13671	934 aa		13.44	□□□□□ -0.26
PKN1-211	ENST00000588200	ITIH2	P19823	946 aa		13.44	□□□□□ -0.26
PKN1-211	ENST00000588200	HTR1B	P28222	390 aa		13.44	□□□□□ -0.26
PKN1-211	ENST00000588200	PCK1	P35558	622 aa		13.44	□□□□□ -0.26
PKN1-211	ENST00000588200	LIG3	P49916	1009 aa		13.44	□□□□□ -0.26
PKN1-211	ENST00000588200	PAPOLA	P51003	745 aa	Known RBP	13.44	□□□□□ -0.26
PKN1-211	ENST00000588200	ADK	P55263	362 aa	Known RBP	13.44	□□□□□ -0.26
PKN1-211	ENST00000588200	IRF4	Q15306	451 aa		13.44	□□□□□ -0.26
PKN1-211	ENST00000588200	FAXC	Q5TGI0	409 aa		13.44	□□□□□ -0.26
PKN1-211	ENST00000588200	RBM44	Q6ZP01	1051 aa	Known RBP	13.44	□□□□□ -0.26
PKN1-211	ENST00000588200	SRL	Q86TD4	932 aa		13.44	□□□□□ -0.26
PKN1-211	ENST00000588200	ZSWIM9	Q86XI8	627 aa		13.44	□□□□□ -0.26
PKN1-211	ENST00000588200	ARL10	Q8N8L6	244 aa		13.44	□□□□□ -0.26
PKN1-211	ENST00000588200	TSEN2	Q8NCE0	465 aa	Known RBP	13.44	□□□□□ -0.26
PKN1-211	ENST00000588200	CCDC97	Q96F63	343 aa	Predicted RBP	13.44	□□□□□ -0.26
PKN1-211	ENST00000588200	FCRL3	Q96P31	734 aa	Predicted RBP	13.44	□□□□□ -0.26
PKN1-211	ENST00000588200	KCTD5	Q9NXV2	234 aa		13.44	□□□□□ -0.26
PKN1-211	ENST00000588200	PADI4	Q9UM07	663 aa		13.44	□□□□□ -0.26
PKN1-211	ENST00000588200		A0A1W2PNU3	283 aa	Predicted RBP	13.43	□□□□□ -0.26
PKN1-211	ENST00000588200	CPED1	A4D0V7	1026 aa		13.43	□□□□□ -0.26
PKN1-211	ENST00000588200	SMTNL1	A8MU46	457 aa		13.43	□□□□□ -0.26
PKN1-211	ENST00000588200	EEF2K	O00418	725 aa	Known RBP	13.43	□□□□□ -0.26
PKN1-211	ENST00000588200	PALM	O75781	387 aa		13.43	□□□□□ -0.26
PKN1-211	ENST00000588200	PIGN	O95427	931 aa		13.43	□□□□□ -0.26
PKN1-211	ENST00000588200	PNLIP	P16233	465 aa		13.43	□□□□□ -0.26
PKN1-211	ENST00000588200	ERCC2	P18074	760 aa		13.43	□□□□□ -0.26
PKN1-211	ENST00000588200	XPA	P23025	273 aa	Predicted RBP	13.43	□□□□□ -0.26
PKN1-211	ENST00000588200	PSMA2	P25787	234 aa		13.43	□□□□□ -0.26
PKN1-211	ENST00000588200	SERPINA4	P29622	427 aa		13.43	□□□□□ -0.26
PKN1-211	ENST00000588200	RENBP	P51606	427 aa		13.43	□□□□□ -0.26
PKN1-211	ENST00000588200	TYRO3	Q06418	890 aa		13.43	□□□□□ -0.26
PKN1-211	ENST00000588200	EIF3I	Q13347	325 aa	Known RBP	13.43	□□□□□ -0.26
PKN1-211	ENST00000588200	DPYS	Q14117	519 aa		13.43	□□□□□ -0.26
PKN1-211	ENST00000588200	INPP5A	Q14642	412 aa		13.43	□□□□□ -0.26
PKN1-211	ENST00000588200	CA9	Q16790	459 aa		13.43	□□□□□ -0.26
PKN1-211	ENST00000588200	ALG11	Q2TAA5	492 aa		13.43	□□□□□ -0.26
PKN1-211	ENST00000588200	FIGN	Q5HY92	759 aa		13.43	□□□□□ -0.26
PKN1-211	ENST00000588200	PERM1	Q5SV97	790 aa		13.43	□□□□□ -0.26
PKN1-211	ENST00000588200	OGFOD3	Q6PK18	319 aa		13.43	□□□□□ -0.26
PKN1-211	ENST00000588200	RFX8	Q6ZV50	586 aa		13.43	□□□□□ -0.26
PKN1-211	ENST00000588200	CLEC14A	Q86T13	490 aa		13.43	□□□□□ -0.26
PKN1-211	ENST00000588200	CAMK1D	Q8IU85	385 aa		13.43	□□□□□ -0.26
PKN1-211	ENST00000588200	CBARP	Q8N350	705 aa	Predicted RBP	13.43	□□□□□ -0.26
PKN1-211	ENST00000588200	SLC39A7	Q92504	469 aa		13.43	□□□□□ -0.26
PKN1-211	ENST00000588200	LIN37	Q96GY3	246 aa	Predicted RBP	13.43	□□□□□ -0.26
PKN1-211	ENST00000588200	EXOC2	Q96KP1	924 aa		13.43	□□□□□ -0.26
PKN1-211	ENST00000588200	PEBP4	Q96S96	227 aa		13.43	□□□□□ -0.26
PKN1-211	ENST00000588200	RBM15	Q96T37	977 aa	Known RBP eCLIP	13.43	□□□□□ -0.26
PKN1-211	ENST00000588200	LGMN	Q99538	433 aa		13.43	□□□□□ -0.26
PKN1-211	ENST00000588200	WRAP53	Q9BUR4	548 aa	Known RBP	13.43	□□□□□ -0.26
PKN1-211	ENST00000588200	SNRNP25	Q9BV90	132 aa	Known RBP	13.43	□□□□□ -0.26
PKN1-211	ENST00000588200	ISCU	Q9H1K1	167 aa		13.43	□□□□□ -0.26
PKN1-211	ENST00000588200	DHX35	Q9H5Z1	703 aa	Known RBP	13.43	□□□□□ -0.26
PKN1-211	ENST00000588200	MRPL47	Q9HD33	250 aa	Known RBP	13.43	□□□□□ -0.26
PKN1-211	ENST00000588200	SCIN	Q9Y6U3	715 aa		13.43	□□□□□ -0.26
PKN1-211	ENST00000588200	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	CAPN8	A6NHC0	703 aa		13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	LRRC53	A6NM62	1247 aa		13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	EIF4E1B	A6NMX2	242 aa	Known RBP	13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	TMX2-CTNND1	H3BSU7	103 aa		13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	ERVH48-1	M5A8F1	160 aa		13.42	□□□□□ -0.26
PKN1-211	ENST00000588200	HTRA2	O43464	458 aa	Predicted RBP	13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms