RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 USP29Q9HBJ7 922 aa23.51■■□□□ 1.35
LSM7-204ENST00000587502 PLXNB3Q9ULL4 1909 aa23.51■■□□□ 1.35
LSM7-204ENST00000587502 TDRD6O60522 2096 aaKnown RBP23.5■■□□□ 1.35
LSM7-204ENST00000587502 MAFKO60675 156 aa23.5■■□□□ 1.35
LSM7-204ENST00000587502 KRT7P08729 469 aa23.5■■□□□ 1.35
LSM7-204ENST00000587502 TMEM253P0C7T8 217 aa23.5■■□□□ 1.35
LSM7-204ENST00000587502 NFKBIAP25963 317 aa23.5■■□□□ 1.35
LSM7-204ENST00000587502 IGFALSP35858 605 aa23.5■■□□□ 1.35
LSM7-204ENST00000587502 MMP12P39900 470 aa23.5■■□□□ 1.35
LSM7-204ENST00000587502 PEX5P50542 639 aa23.5■■□□□ 1.35
LSM7-204ENST00000587502 DAB2P98082 770 aa23.5■■□□□ 1.35
LSM7-204ENST00000587502 E2F1Q01094 437 aa23.5■■□□□ 1.35
LSM7-204ENST00000587502 SLC10A7Q0GE19 358 aa23.5■■□□□ 1.35
LSM7-204ENST00000587502 ZNF542PQ5EBM4 170 aa23.5■■□□□ 1.35
LSM7-204ENST00000587502 TP53INP2Q8IXH6 220 aa23.5■■□□□ 1.35
LSM7-204ENST00000587502 FAM181AQ8N9Y4 354 aa23.5■■□□□ 1.35
LSM7-204ENST00000587502 KCTD6Q8NC69 237 aa23.5■■□□□ 1.35
LSM7-204ENST00000587502 TBATAQ96M53 351 aa23.5■■□□□ 1.35
LSM7-204ENST00000587502 CCDC42Q96M95 316 aa23.5■■□□□ 1.35
LSM7-204ENST00000587502 CCDC86Q9H6F5 360 aaKnown RBP23.5■■□□□ 1.35
LSM7-204ENST00000587502 NCKIPSDQ9NZQ3 722 aa23.5■■□□□ 1.35
LSM7-204ENST00000587502 WDFY3Q8IZQ1 3526 aa23.49■■□□□ 1.35
LSM7-204ENST00000587502 FFAR2O15552 330 aa23.49■■□□□ 1.35
LSM7-204ENST00000587502 LZTS3O60299 673 aaPredicted RBP23.49■■□□□ 1.35
LSM7-204ENST00000587502 C6P13671 934 aa23.49■■□□□ 1.35
LSM7-204ENST00000587502 JUPP14923 745 aa23.49■■□□□ 1.35
LSM7-204ENST00000587502 JUNDP17535 347 aa23.49■■□□□ 1.35
LSM7-204ENST00000587502 IL4RP24394 825 aa23.49■■□□□ 1.35
LSM7-204ENST00000587502 MAN1A1P33908 653 aa23.49■■□□□ 1.35
LSM7-204ENST00000587502 LIG3P49916 1009 aa23.49■■□□□ 1.35
LSM7-204ENST00000587502 DUSP3P51452 185 aaPredicted RBP23.49■■□□□ 1.35
LSM7-204ENST00000587502 MARC1Q5VT66 337 aa23.49■■□□□ 1.35
LSM7-204ENST00000587502 MACC1Q6ZN28 852 aa23.49■■□□□ 1.35
LSM7-204ENST00000587502 PDCD7Q8N8D1 485 aaKnown RBP23.49■■□□□ 1.35
LSM7-204ENST00000587502 ZNF548Q8NEK5 533 aaPredicted RBP23.49■■□□□ 1.35
LSM7-204ENST00000587502 SPOCK2Q92563 424 aa23.49■■□□□ 1.35
LSM7-204ENST00000587502 NUDCD1Q96RS6 583 aa23.49■■□□□ 1.35
LSM7-204ENST00000587502 ZNF670Q9BS34 389 aa23.49■■□□□ 1.35
LSM7-204ENST00000587502 NHEJ1Q9H9Q4 299 aaPredicted RBP23.49■■□□□ 1.35
LSM7-204ENST00000587502 SPASTQ9UBP0 616 aa23.49■■□□□ 1.35
LSM7-204ENST00000587502 TRAFD1O14545 582 aaPredicted RBP23.48■■□□□ 1.35
LSM7-204ENST00000587502 MUSKO15146 869 aa23.48■■□□□ 1.35
LSM7-204ENST00000587502 SOCS5O75159 536 aa23.48■■□□□ 1.35
LSM7-204ENST00000587502 PEX11BO96011 259 aa23.48■■□□□ 1.35
LSM7-204ENST00000587502 CKMT1AP12532 417 aa23.48■■□□□ 1.35
LSM7-204ENST00000587502 ARSEP51690 589 aa23.48■■□□□ 1.35
LSM7-204ENST00000587502 ZSWIM9Q86XI8 627 aa23.48■■□□□ 1.35
LSM7-204ENST00000587502 ATL2Q8NHH9 583 aa23.48■■□□□ 1.35
LSM7-204ENST00000587502 MGME1Q9BQP7 344 aa23.48■■□□□ 1.35
LSM7-204ENST00000587502 SCUBE2Q9NQ36 999 aa23.48■■□□□ 1.35
LSM7-204ENST00000587502 MBNL1Q9NR56 388 aaKnown RBP23.48■■□□□ 1.35
LSM7-204ENST00000587502 HAUS2Q9NVX0 235 aa23.48■■□□□ 1.35
LSM7-204ENST00000587502 FREM2Q5SZK8 3169 aa23.48■■□□□ 1.35
LSM7-204ENST00000587502 DMXL2Q8TDJ6 3036 aa23.47■■□□□ 1.35
LSM7-204ENST00000587502 CACNA1GO43497 2377 aa23.47■■□□□ 1.35
LSM7-204ENST00000587502 K7ESM1 405 aa23.47■■□□□ 1.35
LSM7-204ENST00000587502 AQP9O43315 295 aa23.47■■□□□ 1.35
LSM7-204ENST00000587502 CAPNS1P04632 268 aa23.47■■□□□ 1.35
LSM7-204ENST00000587502 GIMD1P0DJR0 217 aa23.47■■□□□ 1.35
LSM7-204ENST00000587502 HTR1BP28222 390 aa23.47■■□□□ 1.35
LSM7-204ENST00000587502 MMP13P45452 471 aa23.47■■□□□ 1.35
LSM7-204ENST00000587502 BLKP51451 505 aa23.47■■□□□ 1.35
LSM7-204ENST00000587502 EIF2B5Q13144 721 aaKnown RBP23.47■■□□□ 1.35
LSM7-204ENST00000587502 DPYSL3Q14195 570 aa23.47■■□□□ 1.35
LSM7-204ENST00000587502 IRF4Q15306 451 aa23.47■■□□□ 1.35
LSM7-204ENST00000587502 WSCD2Q2TBF2 565 aa23.47■■□□□ 1.35
LSM7-204ENST00000587502 CACTIN-AS1Q8N1I8 211 aa23.47■■□□□ 1.35
LSM7-204ENST00000587502 PACSIN1Q9BY11 444 aa23.47■■□□□ 1.35
LSM7-204ENST00000587502 SLC13A1Q9BZW2 595 aa23.47■■□□□ 1.35
LSM7-204ENST00000587502 DKK4Q9UBT3 224 aa23.47■■□□□ 1.35
LSM7-204ENST00000587502 COQ6Q9Y2Z9 468 aa23.47■■□□□ 1.35
LSM7-204ENST00000587502 SRRM3A6NNA2 597 aaPredicted RBP23.46■■□□□ 1.35
LSM7-204ENST00000587502 TPP1O14773 563 aa23.46■■□□□ 1.35
LSM7-204ENST00000587502 HTRA2O43464 458 aaPredicted RBP23.46■■□□□ 1.35
LSM7-204ENST00000587502 CD48P09326 243 aa23.46■■□□□ 1.35
LSM7-204ENST00000587502 ELFN1P0C7U0 828 aa23.46■■□□□ 1.35
LSM7-204ENST00000587502 CR2P20023 1033 aa23.46■■□□□ 1.35
LSM7-204ENST00000587502 ARHGAP25P42331 645 aa23.46■■□□□ 1.35
LSM7-204ENST00000587502 MMRN1Q13201 1228 aa23.46■■□□□ 1.35
LSM7-204ENST00000587502 PAFAH1B3Q15102 231 aaKnown RBP23.46■■□□□ 1.35
LSM7-204ENST00000587502 ANKRD20A8PQ5CZ79 823 aa23.46■■□□□ 1.35
LSM7-204ENST00000587502 TIGD7Q6NT04 549 aaPredicted RBP23.46■■□□□ 1.35
LSM7-204ENST00000587502 ZCCHC8Q6NZY4 707 aaKnown RBP23.46■■□□□ 1.35
LSM7-204ENST00000587502 DPPA4Q7L190 304 aa23.46■■□□□ 1.35
LSM7-204ENST00000587502 PROSER1Q86XN7 944 aa23.46■■□□□ 1.35
LSM7-204ENST00000587502 RHOT2Q8IXI1 618 aa23.46■■□□□ 1.35
LSM7-204ENST00000587502 RFFLQ8WZ73 363 aa23.46■■□□□ 1.35
LSM7-204ENST00000587502 APOBEC3BQ9UH17 382 aaKnown RBP23.46■■□□□ 1.35
LSM7-204ENST00000587502 KLF15Q9UIH9 416 aa23.46■■□□□ 1.35
LSM7-204ENST00000587502 FAM149AA5PLN7 773 aa23.45■■□□□ 1.34
LSM7-204ENST00000587502 TRABD2BA6NFA1 517 aa23.45■■□□□ 1.34
LSM7-204ENST00000587502 GP1BAP07359 652 aa23.45■■□□□ 1.34
LSM7-204ENST00000587502 CDC25BP30305 580 aa23.45■■□□□ 1.34
LSM7-204ENST00000587502 GJC1P36383 396 aa23.45■■□□□ 1.34
LSM7-204ENST00000587502 PPARDQ03181 441 aa23.45■■□□□ 1.34
LSM7-204ENST00000587502 GALNT2Q10471 571 aa23.45■■□□□ 1.34
LSM7-204ENST00000587502 MTM1Q13496 603 aa23.45■■□□□ 1.34
LSM7-204ENST00000587502 CAMK2BQ13554 666 aa23.45■■□□□ 1.34
LSM7-204ENST00000587502 TPRG1LQ5T0D9 272 aa23.45■■□□□ 1.34
LSM7-204ENST00000587502 ZFYVE27Q5T4F4 411 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms