RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 FCRL2Q96LA5 508 aaPredicted RBP14.29□□□□□ -0.12
CDK5RAP3-237ENST00000585163 ARNT2Q9HBZ2 717 aa14.29□□□□□ -0.12
CDK5RAP3-237ENST00000585163 SPAG4Q9NPE6 437 aa14.29□□□□□ -0.12
CDK5RAP3-237ENST00000585163 TBC1D13Q9NVG8 400 aa14.29□□□□□ -0.12
CDK5RAP3-237ENST00000585163 NYNRINQ9P2P1 1898 aaKnown RBP14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 HEATR9A2RTY3 570 aa14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 PRORSD1PA6NEY8 169 aa14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 ARL5CA6NH57 179 aa14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 CASTOR2A6NHX0 329 aa14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 CCDC166P0CW27 439 aa14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 CCR1P32246 355 aa14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 RPL9P32969 192 aaKnown RBP14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 CPT1AP50416 773 aa14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 WNT3AP56704 352 aa14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 IRF5Q13568 498 aa14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 ACAP2Q15057 778 aa14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 FAM110CQ1W6H9 321 aa14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 MYLK3Q32MK0 819 aa14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 B3GNT6Q6ZMB0 384 aa14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 RPS27LQ71UM5 84 aaKnown RBP14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 CHERPQ8IWX8 916 aaKnown RBP14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 DDI1Q8WTU0 396 aa14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 LPPQ93052 612 aa14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 DUS3LQ96G46 650 aaKnown RBP14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 HIC2Q96JB3 615 aa14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 ZNF597Q96LX8 424 aa14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 SENP6Q9GZR1 1112 aaPredicted RBP14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 CD300AQ9UGN4 299 aa14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 MYOCOSA0A1B0GUC4 107 aa14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 C7orf72A4D263 438 aa14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 SNRPB2P08579 225 aaKnown RBP14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 ZNF865P0CJ78 1059 aaPredicted RBP14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 PSMC3P17980 439 aa14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 HDCP19113 662 aa14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 EPHX2P34913 555 aa14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 NR1H2P55055 460 aa14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 KDELC1Q6UW63 502 aa14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 LRRC49Q8IUZ0 686 aa14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 SLC22A9Q8IVM8 553 aa14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 SPNS2Q8IVW8 549 aa14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 RIN3Q8TB24 985 aa14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 LPGAT1Q92604 370 aa14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 TSPAN17Q96FV3 270 aa14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 SLC25A23Q9BV35 468 aa14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 ABCC13Q9NSE7 274 aa14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 TMLHEQ9NVH6 421 aa14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 HACD3Q9P035 362 aa14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 DMTF1Q9Y222 760 aa14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 TLL2Q9Y6L7 1015 aa14.28□□□□□ -0.12
CDK5RAP3-237ENST00000585163 TCRBV3S1A0A5B6 114 aa14.27□□□□□ -0.13
CDK5RAP3-237ENST00000585163 GPC4O75487 556 aa14.27□□□□□ -0.13
CDK5RAP3-237ENST00000585163 ASLP04424 464 aa14.27□□□□□ -0.13
CDK5RAP3-237ENST00000585163 ODC1P11926 461 aa14.27□□□□□ -0.13
CDK5RAP3-237ENST00000585163 SCNN1GP51170 649 aa14.27□□□□□ -0.13
CDK5RAP3-237ENST00000585163 PLK1P53350 603 aa14.27□□□□□ -0.13
CDK5RAP3-237ENST00000585163 BEX3Q00994 111 aa14.27□□□□□ -0.13
CDK5RAP3-237ENST00000585163 NRF1Q16656 503 aa14.27□□□□□ -0.13
CDK5RAP3-237ENST00000585163 NOMO2Q5JPE7 1267 aa14.27□□□□□ -0.13
CDK5RAP3-237ENST00000585163 C8orf82Q6P1X6 216 aaPredicted RBP14.27□□□□□ -0.13
CDK5RAP3-237ENST00000585163 BORAQ6PGQ7 559 aa14.27□□□□□ -0.13
CDK5RAP3-237ENST00000585163 ARHGAP22Q7Z5H3 698 aa14.27□□□□□ -0.13
CDK5RAP3-237ENST00000585163 RTL3Q8N8U3 475 aaKnown RBP14.27□□□□□ -0.13
CDK5RAP3-237ENST00000585163 GABPB2Q8TAK5 448 aaPredicted RBP14.27□□□□□ -0.13
CDK5RAP3-237ENST00000585163 LRTOMTQ8WZ04 291 aa14.27□□□□□ -0.13
CDK5RAP3-237ENST00000585163 SLCO4A1Q96BD0 722 aa14.27□□□□□ -0.13
CDK5RAP3-237ENST00000585163 PHF21BQ96EK2 531 aa14.27□□□□□ -0.13
CDK5RAP3-237ENST00000585163 PKMYT1Q99640 499 aa14.27□□□□□ -0.13
CDK5RAP3-237ENST00000585163 KATNAL1Q9BW62 490 aa14.27□□□□□ -0.13
CDK5RAP3-237ENST00000585163 SEMA6AQ9H2E6 1030 aa14.27□□□□□ -0.13
CDK5RAP3-237ENST00000585163 SMOC2Q9H3U7 446 aa14.27□□□□□ -0.13
CDK5RAP3-237ENST00000585163 GSTO2Q9H4Y5 243 aa14.27□□□□□ -0.13
CDK5RAP3-237ENST00000585163 COQ10BQ9H8M1 238 aa14.27□□□□□ -0.13
CDK5RAP3-237ENST00000585163 ATP13A1Q9HD20 1204 aa14.27□□□□□ -0.13
CDK5RAP3-237ENST00000585163 SFMBT1Q9UHJ3 866 aa14.27□□□□□ -0.13
CDK5RAP3-237ENST00000585163 ST3GAL5Q9UNP4 418 aa14.27□□□□□ -0.13
CDK5RAP3-237ENST00000585163 TRAF6Q9Y4K3 522 aa14.27□□□□□ -0.13
CDK5RAP3-237ENST00000585163 MSI1O43347 362 aaKnown RBP14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 SLC7A1P30825 629 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 TXNL4AP83876 142 aaKnown RBP14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 RALGDSQ12967 914 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 IKBKEQ14164 716 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 ADRM1Q16186 407 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 PCSK7Q16549 785 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 HECTD2Q5U5R9 776 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 FAM45BPQ6NSW5 357 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 TAF2Q6P1X5 1199 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 HACD2Q6Y1H2 254 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 CYHR1Q6ZMK1 362 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 PTAR1Q7Z6K3 402 aaPredicted RBP14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 GALNT7Q86SF2 657 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 ALDH16A1Q8IZ83 802 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 FAM45AQ8TCE6 357 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 ANKRD49Q8WVL7 239 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 RANBP9Q96S59 729 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 UHRF1Q96T88 793 aaPredicted RBP14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 TRMOQ9BU70 441 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 SLC25A51Q9H1U9 297 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 OSER1Q9NX31 292 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 TMEM181Q9P2C4 612 aa14.26□□□□□ -0.13
CDK5RAP3-237ENST00000585163 IPO11Q9UI26 975 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms