RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 GJB3O75712 270 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 EPN2O95208 641 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 GAS8O95995 478 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 IGLV3-19P01714 112 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 ITGAVP06756 1048 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 ZNF806P0C7X5 589 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 NFKB1P19838 968 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 ACSL1P33121 698 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 DRD3P35462 400 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 DPP6P42658 865 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 METAP1P53582 386 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 ADPRHP54922 357 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 WASHC5Q12768 1159 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 SGCGQ13326 291 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 UGP2Q16851 508 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 SPDYCQ5MJ68 293 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 ANKRD20A2Q5SQ80 823 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 ANKRD20A1Q5TYW2 823 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 ANKRD20A3Q5VUR7 823 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 LYSMD4Q5XG99 296 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 PARS2Q7L3T8 475 aaKnown RBP13.97□□□□□ -0.17
TRAF4-215ENST00000584944 CYP2U1Q7Z449 544 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 KDELC2Q7Z4H8 507 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 ZSCAN30Q86W11 494 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 RASGEF1CQ8N431 466 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 CADM4Q8NFZ8 388 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 SLC35B2Q8TB61 432 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 CCDC110Q8TBZ0 833 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 CXorf40AQ8TE69 158 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 GRK7Q8WTQ7 553 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 HSPA12BQ96MM6 686 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 C1QTNF7Q9BXJ2 289 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 MIR1-1HGQ9H1L0 117 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 GBA3Q9H227 469 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 ARRDC1-AS1Q9H2J1 176 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 SERGEFQ9UGK8 458 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 FAM153AQ9UHL3 310 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 TTC7AQ9ULT0 858 aaPredicted RBP13.97□□□□□ -0.17
TRAF4-215ENST00000584944 CHD8Q9HCK8 2581 aa13.96□□□□□ -0.17
TRAF4-215ENST00000584944 KMT2BQ9UMN6 2715 aaPredicted RBP13.96□□□□□ -0.17
TRAF4-215ENST00000584944 ZNF185O15231 689 aa13.96□□□□□ -0.17
TRAF4-215ENST00000584944 PLRG1O43660 514 aaKnown RBP13.96□□□□□ -0.17
TRAF4-215ENST00000584944 CYP2A6P11509 494 aaPredicted RBP13.96□□□□□ -0.17
TRAF4-215ENST00000584944 GNSP15586 552 aa13.96□□□□□ -0.17
TRAF4-215ENST00000584944 BCKDHBP21953 392 aa13.96□□□□□ -0.17
TRAF4-215ENST00000584944 LIMK1P53667 647 aa13.96□□□□□ -0.17
TRAF4-215ENST00000584944 GEMP55040 296 aa13.96□□□□□ -0.17
TRAF4-215ENST00000584944 RPL26P61254 145 aaKnown RBP13.96□□□□□ -0.17
TRAF4-215ENST00000584944 RPS21P63220 83 aaKnown RBP13.96□□□□□ -0.17
TRAF4-215ENST00000584944 CREB5Q02930 508 aa13.96□□□□□ -0.17
TRAF4-215ENST00000584944 ARHGEF7Q14155 803 aa13.96□□□□□ -0.17
TRAF4-215ENST00000584944 SF3A2Q15428 464 aaKnown RBP13.96□□□□□ -0.17
TRAF4-215ENST00000584944 SETMARQ53H47 684 aaPredicted RBP13.96□□□□□ -0.17
TRAF4-215ENST00000584944 LRRC73Q5JTD7 316 aa13.96□□□□□ -0.17
TRAF4-215ENST00000584944 PIP5KL1Q5T9C9 394 aa13.96□□□□□ -0.17
TRAF4-215ENST00000584944 AGBL4Q5VU57 503 aa13.96□□□□□ -0.17
TRAF4-215ENST00000584944 ALG1LQ6GMV1 187 aa13.96□□□□□ -0.17
TRAF4-215ENST00000584944 PRPF39Q86UA1 669 aaKnown RBP13.96□□□□□ -0.17
TRAF4-215ENST00000584944 CNTD1Q8N815 330 aa13.96□□□□□ -0.17
TRAF4-215ENST00000584944 FRMD1Q8N878 549 aa13.96□□□□□ -0.17
TRAF4-215ENST00000584944 LPCAT1Q8NF37 534 aa13.96□□□□□ -0.17
TRAF4-215ENST00000584944 IMP4Q96G21 291 aaKnown RBP13.96□□□□□ -0.17
TRAF4-215ENST00000584944 ZC3H10Q96K80 434 aaKnown RBP13.96□□□□□ -0.17
TRAF4-215ENST00000584944 PCDH9Q9HC56 1237 aa13.96□□□□□ -0.17
TRAF4-215ENST00000584944 CD93Q9NPY3 652 aa13.96□□□□□ -0.17
TRAF4-215ENST00000584944 VPS45Q9NRW7 570 aa13.96□□□□□ -0.17
TRAF4-215ENST00000584944 UBP1Q9NZI7 540 aa13.96□□□□□ -0.17
TRAF4-215ENST00000584944 PHTF1Q9UMS5 762 aa13.96□□□□□ -0.17
TRAF4-215ENST00000584944 RPL26L1Q9UNX3 145 aaKnown RBP13.96□□□□□ -0.17
TRAF4-215ENST00000584944 CHKBQ9Y259 395 aa13.96□□□□□ -0.17
TRAF4-215ENST00000584944 MAP1BP46821 2468 aaKnown RBP13.96□□□□□ -0.18
TRAF4-215ENST00000584944 C5orf60A6NFR6 353 aa13.95□□□□□ -0.18
TRAF4-215ENST00000584944 TM4SF5O14894 197 aa13.95□□□□□ -0.18
TRAF4-215ENST00000584944 PSMD3O43242 534 aa13.95□□□□□ -0.18
TRAF4-215ENST00000584944 RNGTTO60942 597 aaKnown RBP13.95□□□□□ -0.18
TRAF4-215ENST00000584944 URI1O94763 535 aaPredicted RBP13.95□□□□□ -0.18
TRAF4-215ENST00000584944 PGLSO95336 258 aa13.95□□□□□ -0.18
TRAF4-215ENST00000584944 CR2P20023 1033 aa13.95□□□□□ -0.18
TRAF4-215ENST00000584944 CDK18Q07002 472 aa13.95□□□□□ -0.18
TRAF4-215ENST00000584944 NIPAL4Q0D2K0 466 aa13.95□□□□□ -0.18
TRAF4-215ENST00000584944 TRAF2Q12933 501 aa13.95□□□□□ -0.18
TRAF4-215ENST00000584944 MPP3Q13368 585 aa13.95□□□□□ -0.18
TRAF4-215ENST00000584944 PPP1R7Q15435 360 aa13.95□□□□□ -0.18
TRAF4-215ENST00000584944 CCDC6Q16204 474 aa13.95□□□□□ -0.18
TRAF4-215ENST00000584944 PLK5Q496M5 336 aa13.95□□□□□ -0.18
TRAF4-215ENST00000584944 PLA2G2CQ5R387 149 aa13.95□□□□□ -0.18
TRAF4-215ENST00000584944 KIAA0895LQ68EN5 471 aa13.95□□□□□ -0.18
TRAF4-215ENST00000584944 KIAA1161Q6NSJ0 714 aa13.95□□□□□ -0.18
TRAF4-215ENST00000584944 NEK5Q6P3R8 708 aa13.95□□□□□ -0.18
TRAF4-215ENST00000584944 DRICH1Q6PGQ1 229 aaPredicted RBP13.95□□□□□ -0.18
TRAF4-215ENST00000584944 CCDC137Q6PK04 289 aaKnown RBP13.95□□□□□ -0.18
TRAF4-215ENST00000584944 C4orf22Q6V702 233 aa13.95□□□□□ -0.18
TRAF4-215ENST00000584944 TAB3Q8N5C8 712 aaPredicted RBP13.95□□□□□ -0.18
TRAF4-215ENST00000584944 IPMKQ8NFU5 416 aa13.95□□□□□ -0.18
TRAF4-215ENST00000584944 ATL2Q8NHH9 583 aa13.95□□□□□ -0.18
TRAF4-215ENST00000584944 SPATA22Q8NHS9 363 aa13.95□□□□□ -0.18
TRAF4-215ENST00000584944 KIF18AQ8NI77 898 aa13.95□□□□□ -0.18
TRAF4-215ENST00000584944 ARRDC2Q8TBH0 407 aa13.95□□□□□ -0.18
TRAF4-215ENST00000584944 SKA1Q96BD8 255 aa13.95□□□□□ -0.18
TRAF4-215ENST00000584944 RUNDC3BQ96NL0 473 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms