RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 ANKRD20A8PQ5CZ79 823 aa18■□□□□ 0.47
ERBB2-221ENST00000584888 TMCO4Q5TGY1 634 aa18■□□□□ 0.47
ERBB2-221ENST00000584888 TTC7BQ86TV6 843 aa18■□□□□ 0.47
ERBB2-221ENST00000584888 PDZD3Q86UT5 571 aa18■□□□□ 0.47
ERBB2-221ENST00000584888 LRRC49Q8IUZ0 686 aa18■□□□□ 0.47
ERBB2-221ENST00000584888 KCTD6Q8NC69 237 aa18■□□□□ 0.47
ERBB2-221ENST00000584888 OR4C6Q8NH72 309 aa18■□□□□ 0.47
ERBB2-221ENST00000584888 FAM174AQ8TBP5 190 aa18■□□□□ 0.47
ERBB2-221ENST00000584888 IFT43Q96FT9 208 aa18■□□□□ 0.47
ERBB2-221ENST00000584888 GPR27Q9NS67 375 aa18■□□□□ 0.47
ERBB2-221ENST00000584888 SEPT3Q9UH03 358 aa18■□□□□ 0.47
ERBB2-221ENST00000584888 ITM2BQ9Y287 266 aa18■□□□□ 0.47
ERBB2-221ENST00000584888 FFAR2O15552 330 aa17.99■□□□□ 0.47
ERBB2-221ENST00000584888 PIAS2O75928 621 aa17.99■□□□□ 0.47
ERBB2-221ENST00000584888 ITIH2P19823 946 aa17.99■□□□□ 0.47
ERBB2-221ENST00000584888 CR2P20023 1033 aa17.99■□□□□ 0.47
ERBB2-221ENST00000584888 KDELR1P24390 212 aa17.99■□□□□ 0.47
ERBB2-221ENST00000584888 HADHBP55084 474 aaKnown RBP17.99■□□□□ 0.47
ERBB2-221ENST00000584888 TMEM52BQ4KMG9 183 aa17.99■□□□□ 0.47
ERBB2-221ENST00000584888 HS1BP3Q53T59 392 aa17.99■□□□□ 0.47
ERBB2-221ENST00000584888 ZNF542PQ5EBM4 170 aa17.99■□□□□ 0.47
ERBB2-221ENST00000584888 NCBP2-AS2Q69YL0 99 aa17.99■□□□□ 0.47
ERBB2-221ENST00000584888 PTAR1Q7Z6K3 402 aaPredicted RBP17.99■□□□□ 0.47
ERBB2-221ENST00000584888 ZSWIM9Q86XI8 627 aa17.99■□□□□ 0.47
ERBB2-221ENST00000584888 DCP2Q8IU60 420 aaKnown RBP17.99■□□□□ 0.47
ERBB2-221ENST00000584888 CAMK1DQ8IU85 385 aa17.99■□□□□ 0.47
ERBB2-221ENST00000584888 CCDC170Q8IYT3 715 aa17.99■□□□□ 0.47
ERBB2-221ENST00000584888 PGBD5Q8N414 524 aa17.99■□□□□ 0.47
ERBB2-221ENST00000584888 PQLC3Q8N755 202 aa17.99■□□□□ 0.47
ERBB2-221ENST00000584888 RAPGEF5Q92565 580 aa17.99■□□□□ 0.47
ERBB2-221ENST00000584888 ECHDC3Q96DC8 303 aa17.99■□□□□ 0.47
ERBB2-221ENST00000584888 NXPE2Q96DL1 559 aa17.99■□□□□ 0.47
ERBB2-221ENST00000584888 PANX2Q96RD6 677 aa17.99■□□□□ 0.47
ERBB2-221ENST00000584888 CINPQ9BW66 212 aaPredicted RBP17.99■□□□□ 0.47
ERBB2-221ENST00000584888 A0A087WV48 116 aa17.98■□□□□ 0.47
ERBB2-221ENST00000584888 C3orf70A6NLC5 250 aaPredicted RBP17.98■□□□□ 0.47
ERBB2-221ENST00000584888 TMEM110-MUSTN1A8MSY1 372 aa17.98■□□□□ 0.47
ERBB2-221ENST00000584888 ZNF487B1APH4 448 aa17.98■□□□□ 0.47
ERBB2-221ENST00000584888 TRAFD1O14545 582 aaPredicted RBP17.98■□□□□ 0.47
ERBB2-221ENST00000584888 GIMD1P0DJR0 217 aa17.98■□□□□ 0.47
ERBB2-221ENST00000584888 RENBPP51606 427 aa17.98■□□□□ 0.47
ERBB2-221ENST00000584888 DAB2P98082 770 aa17.98■□□□□ 0.47
ERBB2-221ENST00000584888 E2F1Q01094 437 aa17.98■□□□□ 0.47
ERBB2-221ENST00000584888 INSM1Q01101 510 aaPredicted RBP17.98■□□□□ 0.47
ERBB2-221ENST00000584888 GALNT2Q10471 571 aa17.98■□□□□ 0.47
ERBB2-221ENST00000584888 SGCGQ13326 291 aa17.98■□□□□ 0.47
ERBB2-221ENST00000584888 UGP2Q16851 508 aa17.98■□□□□ 0.47
ERBB2-221ENST00000584888 LRRC73Q5JTD7 316 aa17.98■□□□□ 0.47
ERBB2-221ENST00000584888 LRRC38Q5VT99 294 aa17.98■□□□□ 0.47
ERBB2-221ENST00000584888 BRAT1Q6PJG6 821 aa17.98■□□□□ 0.47
ERBB2-221ENST00000584888 KYAT3Q6YP21 454 aaKnown RBP17.98■□□□□ 0.47
ERBB2-221ENST00000584888 VSIG1Q86XK7 387 aa17.98■□□□□ 0.47
ERBB2-221ENST00000584888 MAP7D3Q8IWC1 876 aa17.98■□□□□ 0.47
ERBB2-221ENST00000584888 TEX26Q8N6G2 289 aa17.98■□□□□ 0.47
ERBB2-221ENST00000584888 SPOCK2Q92563 424 aa17.98■□□□□ 0.47
ERBB2-221ENST00000584888 NRSN2Q9GZP1 204 aa17.98■□□□□ 0.47
ERBB2-221ENST00000584888 DNAJC28Q9NX36 388 aa17.98■□□□□ 0.47
ERBB2-221ENST00000584888 NEMP1O14524 444 aa17.97■□□□□ 0.47
ERBB2-221ENST00000584888 MFSD11O43934 449 aa17.97■□□□□ 0.47
ERBB2-221ENST00000584888 GJC1P36383 396 aa17.97■□□□□ 0.47
ERBB2-221ENST00000584888 HSPA9P38646 679 aaKnown RBP17.97■□□□□ 0.47
ERBB2-221ENST00000584888 MAGEA1P43355 309 aa17.97■□□□□ 0.47
ERBB2-221ENST00000584888 FZD2Q14332 565 aa17.97■□□□□ 0.47
ERBB2-221ENST00000584888 RTP5Q14D33 572 aa17.97■□□□□ 0.47
ERBB2-221ENST00000584888 CACTIN-AS1Q8N1I8 211 aa17.97■□□□□ 0.47
ERBB2-221ENST00000584888 DENND6BQ8NEG7 585 aa17.97■□□□□ 0.47
ERBB2-221ENST00000584888 MAML1Q92585 1016 aa17.97■□□□□ 0.47
ERBB2-221ENST00000584888 FATE1Q969F0 183 aa17.97■□□□□ 0.47
ERBB2-221ENST00000584888 CENPTQ96BT3 561 aa17.97■□□□□ 0.47
ERBB2-221ENST00000584888 TSGA13Q96PP4 275 aa17.97■□□□□ 0.47
ERBB2-221ENST00000584888 RNF157Q96PX1 679 aa17.97■□□□□ 0.47
ERBB2-221ENST00000584888 MGME1Q9BQP7 344 aa17.97■□□□□ 0.47
ERBB2-221ENST00000584888 ATP13A3Q9H7F0 1226 aa17.97■□□□□ 0.47
ERBB2-221ENST00000584888 CLCA2Q9UQC9 943 aa17.97■□□□□ 0.47
ERBB2-221ENST00000584888 AK5Q9Y6K8 562 aa17.97■□□□□ 0.47
ERBB2-221ENST00000584888 CELSR3Q9NYQ7 3312 aa17.96■□□□□ 0.47
ERBB2-221ENST00000584888 SPTY2D1-AS1A0A0U1RR47 76 aa17.96■□□□□ 0.47
ERBB2-221ENST00000584888 NEMP2A6NFY4 417 aa17.96■□□□□ 0.47
ERBB2-221ENST00000584888 RIOK3O14730 519 aaKnown RBP17.96■□□□□ 0.47
ERBB2-221ENST00000584888 FPGTO14772 594 aa17.96■□□□□ 0.47
ERBB2-221ENST00000584888 SCAMP1O15126 338 aa17.96■□□□□ 0.47
ERBB2-221ENST00000584888 HTRA2O43464 458 aaPredicted RBP17.96■□□□□ 0.47
ERBB2-221ENST00000584888 MMP20O60882 483 aa17.96■□□□□ 0.47
ERBB2-221ENST00000584888 CKMT1AP12532 417 aa17.96■□□□□ 0.47
ERBB2-221ENST00000584888 GARSP41250 739 aaKnown RBP17.96■□□□□ 0.47
ERBB2-221ENST00000584888 SLC1A1P43005 524 aa17.96■□□□□ 0.47
ERBB2-221ENST00000584888 RABIFP47224 123 aa17.96■□□□□ 0.47
ERBB2-221ENST00000584888 SCNN1BP51168 640 aa17.96■□□□□ 0.47
ERBB2-221ENST00000584888 AP1S1P61966 158 aa17.96■□□□□ 0.47
ERBB2-221ENST00000584888 HNRNPKP61978 463 aaKnown RBP eCLIP17.96■□□□□ 0.47
ERBB2-221ENST00000584888 SEMG2Q02383 582 aa17.96■□□□□ 0.47
ERBB2-221ENST00000584888 SLC10A2Q12908 348 aaPredicted RBP17.96■□□□□ 0.47
ERBB2-221ENST00000584888 ATPAF2Q8N5M1 289 aa17.96■□□□□ 0.47
ERBB2-221ENST00000584888 DCBLD1Q8N8Z6 715 aa17.96■□□□□ 0.47
ERBB2-221ENST00000584888 NUDCD1Q96RS6 583 aa17.96■□□□□ 0.47
ERBB2-221ENST00000584888 PCDH12Q9NPG4 1184 aa17.96■□□□□ 0.47
ERBB2-221ENST00000584888 NLGN3Q9NZ94 848 aa17.96■□□□□ 0.47
ERBB2-221ENST00000584888 PCDHA13Q9Y5I0 950 aa17.96■□□□□ 0.47
ERBB2-221ENST00000584888 ATRXP46100 2492 aa17.95■□□□□ 0.46
ERBB2-221ENST00000584888 TTC24A2A3L6 582 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms