RNA–Protein interactions for RNA: ENST00000584049.5

BDNF-219, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best)

Gene BDNF, Length 4,030 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-219ENST00000584049 ITPKCQ96DU7 683 aa8.75□□□□□ -1.01
BDNF-219ENST00000584049 ELMO2Q96JJ3 720 aa8.75□□□□□ -1.01
BDNF-219ENST00000584049 OMDQ99983 421 aa8.75□□□□□ -1.01
BDNF-219ENST00000584049 PRKD2Q9BZL6 878 aa8.75□□□□□ -1.01
BDNF-219ENST00000584049 CCDC68Q9H2F9 335 aa8.75□□□□□ -1.01
BDNF-219ENST00000584049 ARHGEF38Q9NXL2 777 aa8.75□□□□□ -1.01
BDNF-219ENST00000584049 ACTR3BQ9P1U1 418 aa8.75□□□□□ -1.01
BDNF-219ENST00000584049 TCAF1Q9Y4C2 921 aa8.75□□□□□ -1.01
BDNF-219ENST00000584049 PPP2R3BQ9Y5P8 575 aa8.75□□□□□ -1.01
BDNF-219ENST00000584049 DNAJC25-GNG10A0A024R161 153 aa8.75□□□□□ -1.01
BDNF-219ENST00000584049 H3BMQ9 156 aa8.75□□□□□ -1.01
BDNF-219ENST00000584049 GIPC1O14908 333 aa8.75□□□□□ -1.01
BDNF-219ENST00000584049 HCRTO43612 131 aa8.75□□□□□ -1.01
BDNF-219ENST00000584049 FAM163BP0C2L3 166 aa8.75□□□□□ -1.01
BDNF-219ENST00000584049 HNRNPLP14866 589 aaKnown RBP eCLIP8.75□□□□□ -1.01
BDNF-219ENST00000584049 WARSP23381 471 aaKnown RBP8.75□□□□□ -1.01
BDNF-219ENST00000584049 LMO2P25791 158 aa8.75□□□□□ -1.01
BDNF-219ENST00000584049 SYPL2Q5VXT5 272 aa8.75□□□□□ -1.01
BDNF-219ENST00000584049 SLC27A1Q6PCB7 646 aa8.75□□□□□ -1.01
BDNF-219ENST00000584049 ALKAL1Q6UXT8 129 aa8.75□□□□□ -1.01
BDNF-219ENST00000584049 ARMCX2Q7L311 632 aa8.75□□□□□ -1.01
BDNF-219ENST00000584049 PDPRQ8NCN5 879 aa8.75□□□□□ -1.01
BDNF-219ENST00000584049 APPL2Q8NEU8 664 aa8.75□□□□□ -1.01
BDNF-219ENST00000584049 GABPB2Q8TAK5 448 aaPredicted RBP8.75□□□□□ -1.01
BDNF-219ENST00000584049 TBC1D15Q8TC07 691 aa8.75□□□□□ -1.01
BDNF-219ENST00000584049 COPS5Q92905 334 aa8.75□□□□□ -1.01
BDNF-219ENST00000584049 TSPAN17Q96FV3 270 aa8.75□□□□□ -1.01
BDNF-219ENST00000584049 COG8Q96MW5 612 aa8.75□□□□□ -1.01
BDNF-219ENST00000584049 FCRL5Q96RD9 977 aa8.75□□□□□ -1.01
BDNF-219ENST00000584049 CDHR5Q9HBB8 845 aa8.75□□□□□ -1.01
BDNF-219ENST00000584049 SNTG2Q9NY99 539 aa8.75□□□□□ -1.01
BDNF-219ENST00000584049 GNPTGQ9UJJ9 305 aa8.75□□□□□ -1.01
BDNF-219ENST00000584049 HEMK1Q9Y5R4 338 aaPredicted RBP8.75□□□□□ -1.01
BDNF-219ENST00000584049 SYNJ2BP-COX16A0A087WUM0 186 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 IQCA1LA6NCM1 817 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 SAC3D1A6NKF1 404 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 XPOTO43592 962 aaKnown RBP8.74□□□□□ -1.01
BDNF-219ENST00000584049 JCHAINP01591 159 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 CPB1P15086 417 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 ARNTP27540 789 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 EPHX2P34913 555 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 SLC1A2P43004 574 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 GMPSP49915 693 aaPredicted RBP8.74□□□□□ -1.01
BDNF-219ENST00000584049 CCT8P50990 548 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 CLCN5P51795 746 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 ILF2Q12905 390 aaKnown RBP8.74□□□□□ -1.01
BDNF-219ENST00000584049 ZNF460Q14592 562 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 MOGQ16653 247 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 GALNT7Q86SF2 657 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 DENND6AQ8IWF6 608 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 FBXO16Q8IX29 292 aaPredicted RBP8.74□□□□□ -1.01
BDNF-219ENST00000584049 B3GALNT2Q8NCR0 500 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 DDHD1Q8NEL9 900 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 C18orf25Q96B23 403 aaPredicted RBP8.74□□□□□ -1.01
BDNF-219ENST00000584049 MYRFLQ96LU7 910 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 PPP1R16BQ96T49 567 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 TREX1Q9NSU2 369 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 COX16Q9P0S2 106 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 ITGB1BP2Q9UKP3 347 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 CDC14AQ9UNH5 594 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 TRAF6Q9Y4K3 522 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 ATE1O95260 518 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 LTA4HP09960 611 aaKnown RBP8.74□□□□□ -1.01
BDNF-219ENST00000584049 GPX3P22352 226 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 SLC26A3P40879 764 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 SLC5A3P53794 718 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 LAMC2Q13753 1193 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 SV2CQ496J9 727 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 BTBD8Q5XKL5 378 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 LEMD2Q8NC56 503 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 L3HYPDHQ96EM0 354 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 FBXO5Q9UKT4 447 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 SLC30A1Q9Y6M5 507 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 TTC24A2A3L6 582 aaPredicted RBP8.74□□□□□ -1.01
BDNF-219ENST00000584049 SOBPA7XYQ1 873 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 NME4O00746 187 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 NOL3O60936 208 aaKnown RBP8.74□□□□□ -1.01
BDNF-219ENST00000584049 ESRRBO95718 433 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 F9P00740 461 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 HDCP19113 662 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 CAPGP40121 348 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 TAF6P49848 677 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 GEMP55040 296 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 C21orf59P57076 290 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 NAA20P61599 178 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 ARHGAP1Q07960 439 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 CTBP1Q13363 440 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 ACAP2Q15057 778 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 PCBP1Q15365 356 aaKnown RBP eCLIP8.74□□□□□ -1.01
BDNF-219ENST00000584049 PPP1R3AQ16821 1122 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 DCLRE1AQ6PJP8 1040 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 FUNDC1Q8IVP5 155 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 TOP6BLQ8N6T0 577 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 NDRG1Q92597 394 aaKnown RBP8.74□□□□□ -1.01
BDNF-219ENST00000584049 PLEKHA8Q96JA3 519 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 ASB2Q96Q27 587 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 TDRD1Q9BXT4 1180 aaKnown RBP8.74□□□□□ -1.01
BDNF-219ENST00000584049 ANLNQ9NQW6 1124 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 SLC38A7Q9NVC3 462 aa8.74□□□□□ -1.01
BDNF-219ENST00000584049 TBC1D13Q9NVG8 400 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms