RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 RWDD4Q6NW29 188 aaKnown RBP12.41□□□□□ -0.42
TOP3A-215ENST00000583328 TRIM65Q6PJ69 517 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 NYAP1Q6ZVC0 841 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 TMPRSS9Q7Z410 1059 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 PIM3Q86V86 326 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 FAM131BQ86XD5 332 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 ZNF354CQ86Y25 554 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 CREBRFQ8IUR6 639 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 SLITRK4Q8IW52 837 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 IL22RA1Q8N6P7 574 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 SHC3Q92529 594 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 VOPP1Q96AW1 172 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 C18orf8Q96DM3 657 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 WDR92Q96MX6 357 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 GDAP1L1Q96MZ0 367 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 RBM15Q96T37 977 aaKnown RBP eCLIP12.41□□□□□ -0.42
TOP3A-215ENST00000583328 DPEP2Q9H4A9 486 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 NDFIP2Q9NV92 336 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 TUBD1Q9UJT1 453 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 ANAPC2Q9UJX6 822 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 MAN2B2Q9Y2E5 1009 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 OR1A2Q9Y585 309 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 UNC13CQ8NB66 2214 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 COL12A1Q99715 3063 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 SYCE3A1L190 88 aa12.4□□□□□ -0.42
TOP3A-215ENST00000583328 B4DGG1 531 aa12.4□□□□□ -0.42
TOP3A-215ENST00000583328 FGFR1OPO95684 399 aaKnown RBP12.4□□□□□ -0.42
TOP3A-215ENST00000583328 IGSF6O95976 241 aa12.4□□□□□ -0.42
TOP3A-215ENST00000583328 RHOQP17081 205 aa12.4□□□□□ -0.42
TOP3A-215ENST00000583328 MAPKAPK2P49137 400 aa12.4□□□□□ -0.42
TOP3A-215ENST00000583328 MARSP56192 900 aaKnown RBP12.4□□□□□ -0.42
TOP3A-215ENST00000583328 APBA1Q02410 837 aa12.4□□□□□ -0.42
TOP3A-215ENST00000583328 AMZ1Q400G9 498 aa12.4□□□□□ -0.42
TOP3A-215ENST00000583328 C14orf28Q4W4Y0 310 aa12.4□□□□□ -0.42
TOP3A-215ENST00000583328 GBP6Q6ZN66 633 aa12.4□□□□□ -0.42
TOP3A-215ENST00000583328 SLC47A2Q86VL8 602 aa12.4□□□□□ -0.42
TOP3A-215ENST00000583328 IRF2BP1Q8IU81 584 aa12.4□□□□□ -0.42
TOP3A-215ENST00000583328 SFTPA2Q8IWL1 248 aa12.4□□□□□ -0.42
TOP3A-215ENST00000583328 FAM26EQ8N5C1 309 aa12.4□□□□□ -0.42
TOP3A-215ENST00000583328 TMEM35BQ8NCS4 154 aa12.4□□□□□ -0.42
TOP3A-215ENST00000583328 NKD1Q969G9 470 aa12.4□□□□□ -0.42
TOP3A-215ENST00000583328 TAAR9Q96RI9 348 aa12.4□□□□□ -0.42
TOP3A-215ENST00000583328 TTYH3Q9C0H2 523 aa12.4□□□□□ -0.42
TOP3A-215ENST00000583328 MAGEH1Q9H213 219 aa12.4□□□□□ -0.42
TOP3A-215ENST00000583328 RDH14Q9HBH5 336 aa12.4□□□□□ -0.42
TOP3A-215ENST00000583328 DKK3Q9UBP4 350 aa12.4□□□□□ -0.42
TOP3A-215ENST00000583328 APEX2Q9UBZ4 518 aa12.4□□□□□ -0.42
TOP3A-215ENST00000583328 DGKBQ9Y6T7 804 aa12.4□□□□□ -0.42
TOP3A-215ENST00000583328 NBASA2RRP1 2371 aa12.4□□□□□ -0.43
TOP3A-215ENST00000583328 FAM170AA1A519 330 aa12.39□□□□□ -0.43
TOP3A-215ENST00000583328 CLEC18AA5D8T8 446 aa12.39□□□□□ -0.43
TOP3A-215ENST00000583328 GOLGA8SH3BPF8 625 aa12.39□□□□□ -0.43
TOP3A-215ENST00000583328 CACNB4O00305 520 aaPredicted RBP12.39□□□□□ -0.43
TOP3A-215ENST00000583328 B4GAT1O43505 415 aa12.39□□□□□ -0.43
TOP3A-215ENST00000583328 KDELR3O43731 214 aa12.39□□□□□ -0.43
TOP3A-215ENST00000583328 NUDT21O43809 227 aaKnown RBP12.39□□□□□ -0.43
TOP3A-215ENST00000583328 RAMP2O60895 175 aa12.39□□□□□ -0.43
TOP3A-215ENST00000583328 TMCC1O94876 653 aa12.39□□□□□ -0.43
TOP3A-215ENST00000583328 CPNE6O95741 557 aa12.39□□□□□ -0.43
TOP3A-215ENST00000583328 FLT3P36888 993 aa12.39□□□□□ -0.43
TOP3A-215ENST00000583328 SCNN1AP37088 669 aa12.39□□□□□ -0.43
TOP3A-215ENST00000583328 SUOXP51687 545 aa12.39□□□□□ -0.43
TOP3A-215ENST00000583328 RHOAP61586 193 aa12.39□□□□□ -0.43
TOP3A-215ENST00000583328 B4GALNT1Q00973 533 aa12.39□□□□□ -0.43
TOP3A-215ENST00000583328 MTM1Q13496 603 aa12.39□□□□□ -0.43
TOP3A-215ENST00000583328 HLTFQ14527 1009 aaKnown RBP eCLIP12.39□□□□□ -0.43
TOP3A-215ENST00000583328 EFHC2Q5JST6 749 aa12.39□□□□□ -0.43
TOP3A-215ENST00000583328 KCTD16Q68DU8 428 aa12.39□□□□□ -0.43
TOP3A-215ENST00000583328 SPECC1LQ69YQ0 1117 aa12.39□□□□□ -0.43
TOP3A-215ENST00000583328 CLEC18BQ6UXF7 455 aa12.39□□□□□ -0.43
TOP3A-215ENST00000583328 NETO2Q8NC67 525 aa12.39□□□□□ -0.43
TOP3A-215ENST00000583328 CLEC18CQ8NCF0 446 aa12.39□□□□□ -0.43
TOP3A-215ENST00000583328 GPBAR1Q8TDU6 330 aa12.39□□□□□ -0.43
TOP3A-215ENST00000583328 OR1E3Q8WZA6 343 aa12.39□□□□□ -0.43
TOP3A-215ENST00000583328 HMCESQ96FZ2 354 aa12.39□□□□□ -0.43
TOP3A-215ENST00000583328 PDXPQ96GD0 296 aa12.39□□□□□ -0.43
TOP3A-215ENST00000583328 CFAP57Q96MR6 1250 aa12.39□□□□□ -0.43
TOP3A-215ENST00000583328 CATSPER2Q96P56 530 aa12.39□□□□□ -0.43
TOP3A-215ENST00000583328 NCAPGQ9BPX3 1015 aa12.39□□□□□ -0.43
TOP3A-215ENST00000583328 CDH19Q9H159 772 aa12.39□□□□□ -0.43
TOP3A-215ENST00000583328 RETREG1Q9H6L5 497 aa12.39□□□□□ -0.43
TOP3A-215ENST00000583328 ZNF71Q9NQZ8 489 aaPredicted RBP12.39□□□□□ -0.43
TOP3A-215ENST00000583328 TMEM248Q9NWD8 314 aa12.39□□□□□ -0.43
TOP3A-215ENST00000583328 OR12D3Q9UGF7 316 aa12.39□□□□□ -0.43
TOP3A-215ENST00000583328 MOSPD1Q9UJG1 213 aa12.39□□□□□ -0.43
TOP3A-215ENST00000583328 BOD1L1Q8NFC6 3051 aa12.39□□□□□ -0.43
TOP3A-215ENST00000583328 BSNQ9UPA5 3926 aa12.38□□□□□ -0.43
TOP3A-215ENST00000583328 BLACEA4D250 179 aa12.38□□□□□ -0.43
TOP3A-215ENST00000583328 ZSCAN5CA6NGD5 496 aaPredicted RBP12.38□□□□□ -0.43
TOP3A-215ENST00000583328 RHPN2P1A8MT19 583 aa12.38□□□□□ -0.43
TOP3A-215ENST00000583328 ZNF891A8MT65 544 aaPredicted RBP12.38□□□□□ -0.43
TOP3A-215ENST00000583328 FOXN3O00409 490 aaPredicted RBP12.38□□□□□ -0.43
TOP3A-215ENST00000583328 HGSO14964 777 aaPredicted RBP12.38□□□□□ -0.43
TOP3A-215ENST00000583328 ZW10O43264 779 aa12.38□□□□□ -0.43
TOP3A-215ENST00000583328 LIFP15018 202 aa12.38□□□□□ -0.43
TOP3A-215ENST00000583328 ALDH4A1P30038 563 aa12.38□□□□□ -0.43
TOP3A-215ENST00000583328 CLCN1P35523 988 aa12.38□□□□□ -0.43
TOP3A-215ENST00000583328 GABRB2P47870 512 aa12.38□□□□□ -0.43
TOP3A-215ENST00000583328 OR1D5P58170 312 aa12.38□□□□□ -0.43
TOP3A-215ENST00000583328 ATP11AP98196 1134 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms