RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 GON4LQ3T8J9 2241 aa9.6□□□□□ -0.87
RFFL-210ENST00000582308 UPK3BL1B0FP48 263 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 ANKRD66B4E2M5 251 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 UPK3BL2E5RIL1 263 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 C1QTNF3-AMACRE9PGA6 284 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 AVILO75366 819 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 ADH1BP00325 375 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 CPP00450 1065 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 PIRTP0C851 137 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 TPH1P17752 444 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 CTPS1P17812 591 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 HLA-DPA1P20036 260 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 C5AR1P21730 350 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 ECHS1P30084 290 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 DRD3P35462 400 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 P2RY2P41231 377 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 MAGEA3P43357 314 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 MAGEA9P43362 315 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 CAV1Q03135 178 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 CNTN1Q12860 1018 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 CALCOCO2Q13137 446 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 MTM1Q13496 603 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 CUL1Q13616 776 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 UGP2Q16851 508 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 MSS51Q4VC12 460 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 LRRC73Q5JTD7 316 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 FNBP1LQ5T0N5 605 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 CERCAMQ5T4B2 595 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 CFAP58Q5T655 872 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 PIP5KL1Q5T9C9 394 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 FAM46CQ5VWP2 391 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 NAPEPLDQ6IQ20 393 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 LRRC8BQ6P9F7 803 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 BRAT1Q6PJG6 821 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 PPP1R21Q6ZMI0 780 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 MAMSTRQ6ZN01 415 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 LINC00523Q86TU6 105 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 HMGB4Q8WW32 186 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 PBXIP1Q96AQ6 731 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 SIPA1Q96FS4 1042 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 SERPINB12Q96P63 405 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 HHIPQ96QV1 700 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 IER2Q9BTL4 223 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 ADGRE3Q9BY15 652 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 HDAC8Q9BY41 377 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 PABPC3Q9H361 631 aaKnown RBP9.59□□□□□ -0.87
RFFL-210ENST00000582308 POLMQ9NP87 494 aaPredicted RBP9.59□□□□□ -0.87
RFFL-210ENST00000582308 SERGEFQ9UGK8 458 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 PHTF1Q9UMS5 762 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 PPIL1Q9Y3C6 166 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 KMT2EQ8IZD2 1858 aa9.59□□□□□ -0.87
RFFL-210ENST00000582308 SPAG17Q6Q759 2223 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 A0A0J9YYE9 177 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 A0A0U1RQS6 177 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 A0A1W2PP55 124 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 A0A1W2PQ67 120 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 SMAPO00193 183 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 NDC80O14777 642 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 SPINT1O43278 529 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 BANF1O75531 89 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 TRBC1P01850 177 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 FGF1P05230 155 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 ALPIP09923 528 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 MLNP12872 115 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 HNF1BP35680 557 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 ABL2P42684 1182 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 TNNT3P45378 269 aaPredicted RBP9.58□□□□□ -0.88
RFFL-210ENST00000582308 CXCL12P48061 93 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 EPHB1P54762 984 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 SESN2P58004 480 aaPredicted RBP9.58□□□□□ -0.88
RFFL-210ENST00000582308 TAS2R38P59533 333 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 POLR2LP62875 67 aaKnown RBP9.58□□□□□ -0.88
RFFL-210ENST00000582308 SARNPP82979 210 aaKnown RBP9.58□□□□□ -0.88
RFFL-210ENST00000582308 SEMG2Q02383 582 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 ZBTB16Q05516 673 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 CBLBQ13191 982 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 HLTFQ14527 1009 aaKnown RBP eCLIP9.58□□□□□ -0.88
RFFL-210ENST00000582308 AGBL4Q5VU57 503 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 DENND2CQ68D51 928 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 ANO7Q6IWH7 933 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 KIAA1324Q6UXG2 1013 aaKnown RBP9.58□□□□□ -0.88
RFFL-210ENST00000582308 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.58□□□□□ -0.88
RFFL-210ENST00000582308 ERN2Q76MJ5 926 aaKnown RBP9.58□□□□□ -0.88
RFFL-210ENST00000582308 BMP8AQ7Z5Y6 402 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 TTC7BQ86TV6 843 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 AGGF1Q8N302 714 aaeCLIP9.58□□□□□ -0.88
RFFL-210ENST00000582308 MPP5Q8N3R9 675 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 HDDC3Q8N4P3 179 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 ZCCHC9Q8N567 271 aaKnown RBP9.58□□□□□ -0.88
RFFL-210ENST00000582308 GPR161Q8N6U8 529 aaKnown RBP9.58□□□□□ -0.88
RFFL-210ENST00000582308 PAF1Q8N7H5 531 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 TMEM105Q8N8V8 129 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 DNAAF3Q8N9W5 541 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 TSTD1Q8NFU3 115 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 MYRIPQ8NFW9 859 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 FAM131CQ96AQ9 280 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 RMDN1Q96DB5 314 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 SCRN2Q96FV2 425 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 PPP1R16AQ96I34 528 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 MCCC1Q96RQ3 725 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms