RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 EDEM3Q9BZQ6 932 aa10.7□□□□□ -0.7
RFFL-209ENST00000581265 SUV39H2Q9H5I1 410 aa10.7□□□□□ -0.7
RFFL-209ENST00000581265 CATSPERBQ9H7T0 1116 aa10.7□□□□□ -0.7
RFFL-209ENST00000581265 FANCLQ9NW38 375 aa10.7□□□□□ -0.7
RFFL-209ENST00000581265 DONSONQ9NYP3 566 aa10.7□□□□□ -0.7
RFFL-209ENST00000581265 LHX3Q9UBR4 397 aa10.7□□□□□ -0.7
RFFL-209ENST00000581265 FZD10Q9ULW2 581 aa10.7□□□□□ -0.7
RFFL-209ENST00000581265 KIF26BQ2KJY2 2108 aa10.7□□□□□ -0.7
RFFL-209ENST00000581265 COL27A1Q8IZC6 1860 aaPredicted RBP10.7□□□□□ -0.7
RFFL-209ENST00000581265 CCDC187A0A096LP49 1063 aa10.69□□□□□ -0.7
RFFL-209ENST00000581265 CFAP69A5D8W1 941 aa10.69□□□□□ -0.7
RFFL-209ENST00000581265 ANKRD62A6NC57 917 aa10.69□□□□□ -0.7
RFFL-209ENST00000581265 K7ENP7 123 aa10.69□□□□□ -0.7
RFFL-209ENST00000581265 CASC3O15234 703 aaKnown RBP10.69□□□□□ -0.7
RFFL-209ENST00000581265 FGF10O15520 208 aaPredicted RBP10.69□□□□□ -0.7
RFFL-209ENST00000581265 CCP110O43303 1012 aa10.69□□□□□ -0.7
RFFL-209ENST00000581265 CREB3O43889 395 aa10.69□□□□□ -0.7
RFFL-209ENST00000581265 BUB1BO60566 1050 aaPredicted RBP10.69□□□□□ -0.7
RFFL-209ENST00000581265 TNFSF15O95150 251 aa10.69□□□□□ -0.7
RFFL-209ENST00000581265 RASGRP1O95267 797 aa10.69□□□□□ -0.7
RFFL-209ENST00000581265 CELA2BP08218 269 aaPredicted RBP10.69□□□□□ -0.7
RFFL-209ENST00000581265 ITGA2BP08514 1039 aa10.69□□□□□ -0.7
RFFL-209ENST00000581265 CTSEP14091 401 aa10.69□□□□□ -0.7
RFFL-209ENST00000581265 XPAP23025 273 aaPredicted RBP10.69□□□□□ -0.7
RFFL-209ENST00000581265 HTR1BP28222 390 aa10.69□□□□□ -0.7
RFFL-209ENST00000581265 HTR7P34969 479 aa10.69□□□□□ -0.7
RFFL-209ENST00000581265 CSNK1DP48730 415 aa10.69□□□□□ -0.7
RFFL-209ENST00000581265 RPL7AP62424 266 aaKnown RBP10.69□□□□□ -0.7
RFFL-209ENST00000581265 SPIDRQ14159 915 aa10.69□□□□□ -0.7
RFFL-209ENST00000581265 INPP5AQ14642 412 aa10.69□□□□□ -0.7
RFFL-209ENST00000581265 SYCP1Q15431 976 aa10.69□□□□□ -0.7
RFFL-209ENST00000581265 ALG11Q2TAA5 492 aa10.69□□□□□ -0.7
RFFL-209ENST00000581265 PPP1R15BQ5SWA1 713 aa10.69□□□□□ -0.7
RFFL-209ENST00000581265 INO80CQ6PI98 192 aaPredicted RBP10.69□□□□□ -0.7
RFFL-209ENST00000581265 BRAT1Q6PJG6 821 aa10.69□□□□□ -0.7
RFFL-209ENST00000581265 ATG14Q6ZNE5 492 aa10.69□□□□□ -0.7
RFFL-209ENST00000581265 DNAAF5Q86Y56 855 aa10.69□□□□□ -0.7
RFFL-209ENST00000581265 HID1Q8IV36 788 aa10.69□□□□□ -0.7
RFFL-209ENST00000581265 ARL10Q8N8L6 244 aa10.69□□□□□ -0.7
RFFL-209ENST00000581265 OR6C4Q8NGE1 309 aa10.69□□□□□ -0.7
RFFL-209ENST00000581265 TSACCQ96A04 125 aaPredicted RBP10.69□□□□□ -0.7
RFFL-209ENST00000581265 LIN37Q96GY3 246 aaPredicted RBP10.69□□□□□ -0.7
RFFL-209ENST00000581265 APOOQ9BUR5 198 aa10.69□□□□□ -0.7
RFFL-209ENST00000581265 LRRC19Q9H756 370 aa10.69□□□□□ -0.7
RFFL-209ENST00000581265 PDFQ9HBH1 243 aa10.69□□□□□ -0.7
RFFL-209ENST00000581265 PCDH12Q9NPG4 1184 aa10.69□□□□□ -0.7
RFFL-209ENST00000581265 WDR70Q9NW82 654 aa10.69□□□□□ -0.7
RFFL-209ENST00000581265 ANKMY1Q9P2S6 941 aa10.69□□□□□ -0.7
RFFL-209ENST00000581265 GULP1Q9UBP9 304 aa10.69□□□□□ -0.7
RFFL-209ENST00000581265 SEPT3Q9UH03 358 aa10.69□□□□□ -0.7
RFFL-209ENST00000581265 DOLKQ9UPQ8 538 aa10.69□□□□□ -0.7
RFFL-209ENST00000581265 SPTA1P02549 2419 aa10.69□□□□□ -0.7
RFFL-209ENST00000581265 UNC13CQ8NB66 2214 aa10.68□□□□□ -0.7
RFFL-209ENST00000581265 PMS2P1A4D2B8 440 aa10.68□□□□□ -0.7
RFFL-209ENST00000581265 TMX2-CTNND1H3BSU7 103 aa10.68□□□□□ -0.7
RFFL-209ENST00000581265 J3KR12 359 aa10.68□□□□□ -0.7
RFFL-209ENST00000581265 PRAMEF11O60813 436 aa10.68□□□□□ -0.7
RFFL-209ENST00000581265 PIGNO95427 931 aa10.68□□□□□ -0.7
RFFL-209ENST00000581265 GP1BBP13224 206 aa10.68□□□□□ -0.7
RFFL-209ENST00000581265 LIG3P49916 1009 aa10.68□□□□□ -0.7
RFFL-209ENST00000581265 NDST2P52849 883 aa10.68□□□□□ -0.7
RFFL-209ENST00000581265 COPB1P53618 953 aaKnown RBP10.68□□□□□ -0.7
RFFL-209ENST00000581265 SRP54P61011 504 aaKnown RBP10.68□□□□□ -0.7
RFFL-209ENST00000581265 EIF3IQ13347 325 aaKnown RBP10.68□□□□□ -0.7
RFFL-209ENST00000581265 NFATC4Q14934 902 aa10.68□□□□□ -0.7
RFFL-209ENST00000581265 KIAA1614Q5VZ46 1190 aa10.68□□□□□ -0.7
RFFL-209ENST00000581265 ERAP2Q6P179 960 aa10.68□□□□□ -0.7
RFFL-209ENST00000581265 DNAJC24Q6P3W2 148 aa10.68□□□□□ -0.7
RFFL-209ENST00000581265 ENPP7Q6UWV6 458 aa10.68□□□□□ -0.7
RFFL-209ENST00000581265 RD3Q7Z3Z2 195 aa10.68□□□□□ -0.7
RFFL-209ENST00000581265 GKN2Q86XP6 184 aa10.68□□□□□ -0.7
RFFL-209ENST00000581265 CAMK1DQ8IU85 385 aa10.68□□□□□ -0.7
RFFL-209ENST00000581265 NEK11Q8NG66 645 aa10.68□□□□□ -0.7
RFFL-209ENST00000581265 ATL2Q8NHH9 583 aa10.68□□□□□ -0.7
RFFL-209ENST00000581265 PCDH19Q8TAB3 1148 aa10.68□□□□□ -0.7
RFFL-209ENST00000581265 EXOC2Q96KP1 924 aa10.68□□□□□ -0.7
RFFL-209ENST00000581265 MCEEQ96PE7 176 aa10.68□□□□□ -0.7
RFFL-209ENST00000581265 TUBGCP5Q96RT8 1024 aa10.68□□□□□ -0.7
RFFL-209ENST00000581265 RBM15Q96T37 977 aaKnown RBP eCLIP10.68□□□□□ -0.7
RFFL-209ENST00000581265 AGPAT1Q99943 283 aa10.68□□□□□ -0.7
RFFL-209ENST00000581265 NCAPGQ9BPX3 1015 aa10.68□□□□□ -0.7
RFFL-209ENST00000581265 UBA2Q9UBT2 640 aaPredicted RBP10.68□□□□□ -0.7
RFFL-209ENST00000581265 LIMA1Q9UHB6 759 aaKnown RBP10.68□□□□□ -0.7
RFFL-209ENST00000581265 RABGEF1Q9UJ41 708 aa10.68□□□□□ -0.7
RFFL-209ENST00000581265 GPR34Q9UPC5 381 aa10.68□□□□□ -0.7
RFFL-209ENST00000581265 COQ6Q9Y2Z9 468 aa10.68□□□□□ -0.7
RFFL-209ENST00000581265 PCDHGA7Q9Y5G6 932 aa10.68□□□□□ -0.7
RFFL-209ENST00000581265 DGKBQ9Y6T7 804 aa10.68□□□□□ -0.7
RFFL-209ENST00000581265 PIEZO2Q9H5I5 2752 aa10.68□□□□□ -0.7
RFFL-209ENST00000581265 A0A1W2PQM1 296 aa10.67□□□□□ -0.7
RFFL-209ENST00000581265 LGALS16A8MUM7 142 aa10.67□□□□□ -0.7
RFFL-209ENST00000581265 EIF3CLB5ME19 914 aaKnown RBP10.67□□□□□ -0.7
RFFL-209ENST00000581265 PLD2O14939 933 aa10.67□□□□□ -0.7
RFFL-209ENST00000581265 TNFP01375 233 aa10.67□□□□□ -0.7
RFFL-209ENST00000581265 HOXC4P09017 264 aaPredicted RBP10.67□□□□□ -0.7
RFFL-209ENST00000581265 MMP12P39900 470 aa10.67□□□□□ -0.7
RFFL-209ENST00000581265 CCL7P80098 99 aa10.67□□□□□ -0.7
RFFL-209ENST00000581265 NSUN2Q08J23 767 aaKnown RBP eCLIP10.67□□□□□ -0.7
RFFL-209ENST00000581265 CLN3Q13286 438 aa10.67□□□□□ -0.7
RFFL-209ENST00000581265 MTM1Q13496 603 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms