RNA–Protein interactions for RNA: ENST00000580958.5

SS18-217, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 775 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-217ENST00000580958 BRWD1Q9NSI6 2320 aa10.59□□□□□ -0.71
SS18-217ENST00000580958 MUC22E2RYF6 1773 aaPredicted RBP10.58□□□□□ -0.72
SS18-217ENST00000580958 MROH6A6NGR9 719 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 SRRM3A6NNA2 597 aaPredicted RBP10.58□□□□□ -0.72
SS18-217ENST00000580958 HEPACAM2A8MVW5 462 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 CCL22O00626 93 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 TRIM24O15164 1050 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 BUD23O43709 281 aaKnown RBP10.58□□□□□ -0.72
SS18-217ENST00000580958 ZNF821O75541 412 aaPredicted RBP10.58□□□□□ -0.72
SS18-217ENST00000580958 IGSF6O95976 241 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 ITGA2BP08514 1039 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 PDHA1P08559 390 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 ADH5P11766 374 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 ARSAP15289 507 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 SPRP35270 261 aaPredicted RBP10.58□□□□□ -0.72
SS18-217ENST00000580958 CCNFP41002 786 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 CSNK1DP48730 415 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 NEK3P51956 506 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 SLC18A1P54219 525 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 WDR4P57081 412 aaKnown RBP10.58□□□□□ -0.72
SS18-217ENST00000580958 AP1S1P61966 158 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 TMPRSS15P98073 1019 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 MPP1Q00013 466 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 ADAM15Q13444 863 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 THOC5Q13769 683 aaKnown RBP10.58□□□□□ -0.72
SS18-217ENST00000580958 DMC1Q14565 340 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 PTPRCAPQ14761 206 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 QPCTQ16769 361 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 DGKKQ5KSL6 1271 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 MBLAC2Q68D91 279 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 C22orf39Q6P5X5 142 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 TIFABQ6ZNK6 161 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 KIAA0907Q7Z7F0 614 aaPredicted RBP10.58□□□□□ -0.72
SS18-217ENST00000580958 METTL3Q86U44 580 aaKnown RBP10.58□□□□□ -0.72
SS18-217ENST00000580958 TAX1BP1Q86VP1 789 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 CNTN4Q8IWV2 1026 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 TNS4Q8IZW8 715 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 RYBPQ8N488 228 aaPredicted RBP10.58□□□□□ -0.72
SS18-217ENST00000580958 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.58□□□□□ -0.72
SS18-217ENST00000580958 KIAA1958Q8N8K9 716 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 OR13J1Q8NGT2 312 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 OR6K2Q8NGY2 324 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 BRSK1Q8TDC3 778 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 ALKBH8Q96BT7 664 aaKnown RBP10.58□□□□□ -0.72
SS18-217ENST00000580958 ATXN7L3BQ96GX2 97 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 ZFYVE19Q96K21 471 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 DNAJC1Q96KC8 554 aaKnown RBP10.58□□□□□ -0.72
SS18-217ENST00000580958 PAIP2Q9BPZ3 127 aaKnown RBP10.58□□□□□ -0.72
SS18-217ENST00000580958 SLC2A11Q9BYW1 496 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 EPN3Q9H201 632 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 TNKS2Q9H2K2 1166 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 C12orf65Q9H3J6 166 aaKnown RBP10.58□□□□□ -0.72
SS18-217ENST00000580958 PCMTD2Q9NV79 361 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 NSMCE4AQ9NXX6 385 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 ARL5AQ9Y689 179 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 TICRRQ7Z2Z1 1910 aa10.58□□□□□ -0.72
SS18-217ENST00000580958 PLXNB3Q9ULL4 1909 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 CXorf51AA0A1B0GTR3 108 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.57□□□□□ -0.72
SS18-217ENST00000580958 COPEO14579 308 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 TPP1O14773 563 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 SIN3BO75182 1162 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 ZWINTO95229 277 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 PIGNO95427 931 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 NFATC1O95644 943 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 ADH1CP00326 375 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 GSRP00390 522 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 FCARP24071 287 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 GKP32189 559 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 SLC1A2P43004 574 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 ARSDP51689 593 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 LIMK2P53671 638 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 SEC24CP53992 1094 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 SNRPD1P62314 119 aaKnown RBP10.57□□□□□ -0.72
SS18-217ENST00000580958 PDE1BQ01064 536 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 SULT2A1Q06520 285 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 DNAJC3Q13217 504 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 CTBP1Q13363 440 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 LAMB3Q13751 1172 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 GEN1Q17RS7 908 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 ARMC12Q5T9G4 340 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 HHATQ5VTY9 493 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 TMEM215Q68D42 235 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 TANGO2Q6ICL3 276 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 NEPROQ6NW34 567 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 LVRNQ6Q4G3 990 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 ADIPOR2Q86V24 386 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 CAMK1DQ8IU85 385 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 DENND6AQ8IWF6 608 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 DCLK2Q8N568 766 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 OR6P1Q8NGX9 317 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 TCP10LQ8TDR4 215 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 CKAP2Q8WWK9 683 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 MYLIPQ8WY64 445 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 PTPRN2Q92932 1015 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 HDAC10Q969S8 669 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 MYO19Q96H55 970 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 SGSM3Q96HU1 749 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 FAM167BQ9BTA0 163 aa10.57□□□□□ -0.72
SS18-217ENST00000580958 ADGRE3Q9BY15 652 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms