RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 LRRC39Q96DD0 335 aa4.13□□□□□ -1.75
SMG8-205ENST00000580798 FAM120BQ96EK7 910 aaKnown RBP4.13□□□□□ -1.75
SMG8-205ENST00000580798 SIPA1Q96FS4 1042 aa4.13□□□□□ -1.75
SMG8-205ENST00000580798 HMCESQ96FZ2 354 aa4.13□□□□□ -1.75
SMG8-205ENST00000580798 PRAM1Q96QH2 718 aa4.13□□□□□ -1.75
SMG8-205ENST00000580798 PSKH2Q96QS6 385 aa4.13□□□□□ -1.75
SMG8-205ENST00000580798 C1orf43Q9BWL3 253 aa4.13□□□□□ -1.75
SMG8-205ENST00000580798 TSGA10Q9BZW7 698 aa4.13□□□□□ -1.75
SMG8-205ENST00000580798 UNKQ9C0B0 810 aaKnown RBP4.13□□□□□ -1.75
SMG8-205ENST00000580798 TINAGL1Q9GZM7 467 aaPredicted RBP4.13□□□□□ -1.75
SMG8-205ENST00000580798 EBF3Q9H4W6 596 aa4.13□□□□□ -1.75
SMG8-205ENST00000580798 GPR35Q9HC97 309 aa4.13□□□□□ -1.75
SMG8-205ENST00000580798 SERHLQ9NQF3 203 aa4.13□□□□□ -1.75
SMG8-205ENST00000580798 SLC35C2Q9NQQ7 365 aa4.13□□□□□ -1.75
SMG8-205ENST00000580798 ANGPTL2Q9UKU9 493 aa4.13□□□□□ -1.75
SMG8-205ENST00000580798 ZNF215Q9UL58 517 aaPredicted RBP4.13□□□□□ -1.75
SMG8-205ENST00000580798 PIN4Q9Y237 131 aaKnown RBP4.13□□□□□ -1.75
SMG8-205ENST00000580798 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 SYCE3A1L190 88 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 LRRD1A4D1F6 860 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 EME2A4GXA9 379 aaPredicted RBP4.12□□□□□ -1.75
SMG8-205ENST00000580798 NCF1BA6NI72 391 aaPredicted RBP4.12□□□□□ -1.75
SMG8-205ENST00000580798 NCF1CA8MVU1 366 aaPredicted RBP4.12□□□□□ -1.75
SMG8-205ENST00000580798 TTC34A8MYJ7 566 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 HSBP1L1C9JCN9 74 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 E9PMD0 336 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 ZNF213O14771 459 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 NIPSNAP2O75323 286 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 UBXN7O94888 489 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 NXPH3O95157 252 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 POP4O95707 220 aaKnown RBP4.12□□□□□ -1.75
SMG8-205ENST00000580798 NHLRC4P0CG21 123 aaPredicted RBP4.12□□□□□ -1.75
SMG8-205ENST00000580798 TROVE2P10155 538 aaKnown RBP eCLIP4.12□□□□□ -1.75
SMG8-205ENST00000580798 PRKAR1AP10644 381 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 RARBP10826 455 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 HSPA8P11142 646 aaKnown RBP4.12□□□□□ -1.75
SMG8-205ENST00000580798 NDUFB7P17568 137 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 TYMPP19971 482 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 PRDX5P30044 214 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 TLX1P31314 330 aaPredicted RBP4.12□□□□□ -1.75
SMG8-205ENST00000580798 EIF2DP41214 584 aaKnown RBP4.12□□□□□ -1.75
SMG8-205ENST00000580798 DPP6P42658 865 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 CPA2P48052 419 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 PIK3CGP48736 1102 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 FXR1P51114 621 aaKnown RBP eCLIP4.12□□□□□ -1.75
SMG8-205ENST00000580798 LUMP51884 338 aaPredicted RBP4.12□□□□□ -1.75
SMG8-205ENST00000580798 ALDH18A1P54886 795 aaKnown RBP4.12□□□□□ -1.75
SMG8-205ENST00000580798 ADKP55263 362 aaKnown RBP4.12□□□□□ -1.75
SMG8-205ENST00000580798 CARD18P57730 90 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 NOP14P78316 857 aaKnown RBP4.12□□□□□ -1.75
SMG8-205ENST00000580798 ASPHQ12797 758 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 TCF15Q12870 199 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 PMS2P11Q13670 270 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 CYLC2Q14093 348 aaPredicted RBP4.12□□□□□ -1.75
SMG8-205ENST00000580798 MAPRE2Q15555 327 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 KYNUQ16719 465 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 AAK1Q2M2I8 961 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 FUT11Q495W5 492 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 ANO6Q4KMQ2 910 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 BMP2KLQ5H9B9 411 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 FAXCQ5TGI0 409 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 ETFRF1Q6IPR1 90 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 KRTAP5-1Q6L8H4 278 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 CEP85Q6P2H3 762 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 AAGABQ6PD74 315 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 NPNTQ6UXI9 565 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 LRIG3Q6UXM1 1119 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 TAOK1Q7L7X3 1001 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 TAS2R42Q7RTR8 314 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 PPP1R32Q7Z5V6 425 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 KIAA1328Q86T90 577 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 TADA2BQ86TJ2 420 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 VPS36Q86VN1 386 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 LIX1LQ8IVB5 337 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 TUSC5Q8IXB3 177 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 C17orf53Q8N3J3 647 aaPredicted RBP4.12□□□□□ -1.75
SMG8-205ENST00000580798 ARFGAP2Q8N6H7 521 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 FAM133AQ8N9E0 248 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 POMGNT2Q8NAT1 580 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 SETD6Q8TBK2 473 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 SPPL3Q8TCT6 385 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 PIBF1Q8WXW3 757 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 HERVK_113Q902F9 699 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 ZNF566Q969W8 418 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 VPS33AQ96AX1 596 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 MVB12AQ96EY5 273 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 SUCLG2Q96I99 432 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 C7orf34Q96L11 122 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 TCEANC2Q96MN5 208 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 SMC6Q96SB8 1091 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 BCL7BQ9BQE9 202 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 TRIM2Q9C040 744 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 B3GNT4Q9C0J1 378 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 VPS16Q9H269 839 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 DENND2DQ9H6A0 471 aaPredicted RBP4.12□□□□□ -1.75
SMG8-205ENST00000580798 TTC12Q9H892 705 aaPredicted RBP4.12□□□□□ -1.75
SMG8-205ENST00000580798 SAYSD1Q9NPB0 183 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 ARHGEF3Q9NR81 526 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 SLC35D1Q9NTN3 355 aa4.12□□□□□ -1.75
SMG8-205ENST00000580798 SH3BP4Q9P0V3 963 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms