RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 ARRDC2Q8TBH0 407 aa12.26□□□□□ -0.45
CCDC84-209ENST00000580556 CCHCR1Q8TD31 782 aa12.26□□□□□ -0.45
CCDC84-209ENST00000580556 HNRNPLLQ8WVV9 542 aaKnown RBP12.26□□□□□ -0.45
CCDC84-209ENST00000580556 VOPP1Q96AW1 172 aa12.26□□□□□ -0.45
CCDC84-209ENST00000580556 TADA1Q96BN2 335 aa12.26□□□□□ -0.45
CCDC84-209ENST00000580556 EXOC2Q96KP1 924 aa12.26□□□□□ -0.45
CCDC84-209ENST00000580556 FCRL5Q96RD9 977 aa12.26□□□□□ -0.45
CCDC84-209ENST00000580556 FAM129BQ96TA1 746 aa12.26□□□□□ -0.45
CCDC84-209ENST00000580556 HEPHQ9BQS7 1158 aa12.26□□□□□ -0.45
CCDC84-209ENST00000580556 CEP41Q9BYV8 373 aa12.26□□□□□ -0.45
CCDC84-209ENST00000580556 DDX47Q9H0S4 455 aaKnown RBP12.26□□□□□ -0.45
CCDC84-209ENST00000580556 ATP13A3Q9H7F0 1226 aa12.26□□□□□ -0.45
CCDC84-209ENST00000580556 C10orf88Q9H8K7 445 aa12.26□□□□□ -0.45
CCDC84-209ENST00000580556 SCUBE2Q9NQ36 999 aa12.26□□□□□ -0.45
CCDC84-209ENST00000580556 PAK5Q9P286 719 aa12.26□□□□□ -0.45
CCDC84-209ENST00000580556 HECAQ9UBI9 543 aaPredicted RBP12.26□□□□□ -0.45
CCDC84-209ENST00000580556 IL36AQ9UHA7 158 aa12.26□□□□□ -0.45
CCDC84-209ENST00000580556 NEU2Q9Y3R4 380 aa12.26□□□□□ -0.45
CCDC84-209ENST00000580556 PLXNB3Q9ULL4 1909 aa12.26□□□□□ -0.45
CCDC84-209ENST00000580556 RNASEH1O60930 286 aaKnown RBP12.25□□□□□ -0.45
CCDC84-209ENST00000580556 ADH1BP00325 375 aa12.25□□□□□ -0.45
CCDC84-209ENST00000580556 SERPINF2P08697 491 aa12.25□□□□□ -0.45
CCDC84-209ENST00000580556 NFKB1P19838 968 aa12.25□□□□□ -0.45
CCDC84-209ENST00000580556 CA4P22748 312 aa12.25□□□□□ -0.45
CCDC84-209ENST00000580556 SERPINA4P29622 427 aa12.25□□□□□ -0.45
CCDC84-209ENST00000580556 ACTN2P35609 894 aa12.25□□□□□ -0.45
CCDC84-209ENST00000580556 WASP42768 502 aa12.25□□□□□ -0.45
CCDC84-209ENST00000580556 KCNJ1P48048 391 aa12.25□□□□□ -0.45
CCDC84-209ENST00000580556 SCNN1BP51168 640 aa12.25□□□□□ -0.45
CCDC84-209ENST00000580556 COPAP53621 1224 aa12.25□□□□□ -0.45
CCDC84-209ENST00000580556 MAXP61244 160 aa12.25□□□□□ -0.45
CCDC84-209ENST00000580556 ZNF776Q68DI1 518 aaPredicted RBP12.25□□□□□ -0.45
CCDC84-209ENST00000580556 NCEH1Q6PIU2 408 aa12.25□□□□□ -0.45
CCDC84-209ENST00000580556 PID1Q7Z2X4 250 aa12.25□□□□□ -0.45
CCDC84-209ENST00000580556 RAB44Q7Z6P3 723 aaPredicted RBP12.25□□□□□ -0.45
CCDC84-209ENST00000580556 CHST14Q8NCH0 376 aa12.25□□□□□ -0.45
CCDC84-209ENST00000580556 CCDC110Q8TBZ0 833 aa12.25□□□□□ -0.45
CCDC84-209ENST00000580556 MDM1Q8TC05 714 aa12.25□□□□□ -0.45
CCDC84-209ENST00000580556 HCAR2Q8TDS4 363 aa12.25□□□□□ -0.45
CCDC84-209ENST00000580556 ZNF641Q96N77 438 aaPredicted RBP12.25□□□□□ -0.45
CCDC84-209ENST00000580556 CAMK1GQ96NX5 476 aa12.25□□□□□ -0.45
CCDC84-209ENST00000580556 SEMA3CQ99985 751 aa12.25□□□□□ -0.45
CCDC84-209ENST00000580556 GTPBP2Q9BX10 602 aaKnown RBP12.25□□□□□ -0.45
CCDC84-209ENST00000580556 NUSAP1Q9BXS6 441 aaKnown RBP12.25□□□□□ -0.45
CCDC84-209ENST00000580556 MTG2Q9H4K7 406 aa12.25□□□□□ -0.45
CCDC84-209ENST00000580556 NOD2Q9HC29 1040 aa12.25□□□□□ -0.45
CCDC84-209ENST00000580556 POLMQ9NP87 494 aaPredicted RBP12.25□□□□□ -0.45
CCDC84-209ENST00000580556 RSPH14Q9UHP6 348 aa12.25□□□□□ -0.45
CCDC84-209ENST00000580556 PPM1HQ9ULR3 514 aa12.25□□□□□ -0.45
CCDC84-209ENST00000580556 SCML1Q9UN30 329 aa12.25□□□□□ -0.45
CCDC84-209ENST00000580556 TTLL3Q9Y4R7 772 aa12.25□□□□□ -0.45
CCDC84-209ENST00000580556 WASF2Q9Y6W5 498 aa12.25□□□□□ -0.45
CCDC84-209ENST00000580556 SHROOM3Q8TF72 1996 aa12.25□□□□□ -0.45
CCDC84-209ENST00000580556 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.24□□□□□ -0.45
CCDC84-209ENST00000580556 A0A1W2PQ67 120 aa12.24□□□□□ -0.45
CCDC84-209ENST00000580556 TSPAN11A1L157 253 aa12.24□□□□□ -0.45
CCDC84-209ENST00000580556 CTAGE15A4D2H0 777 aa12.24□□□□□ -0.45
CCDC84-209ENST00000580556 GOLGA6CA6NDK9 693 aa12.24□□□□□ -0.45
CCDC84-209ENST00000580556 GOLGA6BA6NDN3 693 aa12.24□□□□□ -0.45
CCDC84-209ENST00000580556 C1QTNF3-AMACRE9PGA6 284 aa12.24□□□□□ -0.45
CCDC84-209ENST00000580556 HTRA2O43464 458 aaPredicted RBP12.24□□□□□ -0.45
CCDC84-209ENST00000580556 ANXA9O76027 345 aa12.24□□□□□ -0.45
CCDC84-209ENST00000580556 ALDH1A2O94788 518 aa12.24□□□□□ -0.45
CCDC84-209ENST00000580556 IFNB1P01574 187 aa12.24□□□□□ -0.45
CCDC84-209ENST00000580556 CTSLP07711 333 aa12.24□□□□□ -0.45
CCDC84-209ENST00000580556 MMP2P08253 660 aa12.24□□□□□ -0.45
CCDC84-209ENST00000580556 GOLGA6DP0CG33 693 aa12.24□□□□□ -0.45
CCDC84-209ENST00000580556 CTAGE8P0CG41 777 aa12.24□□□□□ -0.45
CCDC84-209ENST00000580556 ITPKAP23677 461 aa12.24□□□□□ -0.45
CCDC84-209ENST00000580556 FDFT1P37268 417 aa12.24□□□□□ -0.45
CCDC84-209ENST00000580556 SKOR1P84550 965 aa12.24□□□□□ -0.45
CCDC84-209ENST00000580556 DR1Q01658 176 aa12.24□□□□□ -0.45
CCDC84-209ENST00000580556 DSC2Q02487 901 aa12.24□□□□□ -0.45
CCDC84-209ENST00000580556 ITKQ08881 620 aa12.24□□□□□ -0.45
CCDC84-209ENST00000580556 NIPAL4Q0D2K0 466 aa12.24□□□□□ -0.45
CCDC84-209ENST00000580556 PARP6Q2NL67 630 aa12.24□□□□□ -0.45
CCDC84-209ENST00000580556 FAM46CQ5VWP2 391 aa12.24□□□□□ -0.45
CCDC84-209ENST00000580556 MAATS1Q7Z4T9 603 aa12.24□□□□□ -0.45
CCDC84-209ENST00000580556 CTAGE6Q86UF2 777 aa12.24□□□□□ -0.45
CCDC84-209ENST00000580556 C11orf74Q86VG3 221 aa12.24□□□□□ -0.45
CCDC84-209ENST00000580556 SYT12Q8IV01 421 aa12.24□□□□□ -0.45
CCDC84-209ENST00000580556 CTAGE4Q8IX94 777 aa12.24□□□□□ -0.45
CCDC84-209ENST00000580556 STK40Q8N2I9 435 aa12.24□□□□□ -0.45
CCDC84-209ENST00000580556 DEFB119Q8N690 84 aa12.24□□□□□ -0.45
CCDC84-209ENST00000580556 PNPLA1Q8N8W4 532 aa12.24□□□□□ -0.45
CCDC84-209ENST00000580556 ECHDC3Q96DC8 303 aa12.24□□□□□ -0.45
CCDC84-209ENST00000580556 PPP1R16AQ96I34 528 aa12.24□□□□□ -0.45
CCDC84-209ENST00000580556 MKRN2Q9H000 416 aaKnown RBP12.24□□□□□ -0.45
CCDC84-209ENST00000580556 ZDHHC6Q9H6R6 413 aa12.24□□□□□ -0.45
CCDC84-209ENST00000580556 GOLGA6AQ9NYA3 693 aa12.24□□□□□ -0.45
CCDC84-209ENST00000580556 DKK3Q9UBP4 350 aa12.24□□□□□ -0.45
CCDC84-209ENST00000580556 AAR2Q9Y312 384 aaKnown RBP12.24□□□□□ -0.45
CCDC84-209ENST00000580556 FLNBO75369 2602 aaKnown RBP12.23□□□□□ -0.45
CCDC84-209ENST00000580556 TCRBV21S2A2A0A5A6 115 aa12.23□□□□□ -0.45
CCDC84-209ENST00000580556 ERI2A8K979 691 aaKnown RBP12.23□□□□□ -0.45
CCDC84-209ENST00000580556 CYSRT1A8MQ03 144 aa12.23□□□□□ -0.45
CCDC84-209ENST00000580556 TRAFD1O14545 582 aaPredicted RBP12.23□□□□□ -0.45
CCDC84-209ENST00000580556 BNIP3LO60238 219 aa12.23□□□□□ -0.45
CCDC84-209ENST00000580556 LEFTY1O75610 366 aa12.23□□□□□ -0.45
CCDC84-209ENST00000580556 TRIM16O95361 564 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms