RNA–Protein interactions for RNA: ENST00000579969.1

SNORD53-201, Transcript of small nucleolar RNA, C/D box 53, humanhuman

BASIC

Gene SNORD53, Length 78 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD53-201ENST00000579969 INTS4Q96HW7 963 aaKnown RBP2.46□□□□□ -2.02
SNORD53-201ENST00000579969 TNIP3Q96KP6 325 aa2.46□□□□□ -2.02
SNORD53-201ENST00000579969 FAM81BQ96LP2 452 aa2.46□□□□□ -2.02
SNORD53-201ENST00000579969 CCDC74BQ96LY2 380 aa2.46□□□□□ -2.02
SNORD53-201ENST00000579969 JAKMIP1Q96N16 626 aaKnown RBP2.46□□□□□ -2.02
SNORD53-201ENST00000579969 LENG8Q96PV6 779 aaPredicted RBP2.46□□□□□ -2.02
SNORD53-201ENST00000579969 PLIN2Q99541 437 aa2.46□□□□□ -2.02
SNORD53-201ENST00000579969 KLF6Q99612 283 aaPredicted RBP2.46□□□□□ -2.02
SNORD53-201ENST00000579969 BARD1Q99728 777 aaKnown RBP2.46□□□□□ -2.02
SNORD53-201ENST00000579969 CTRCQ99895 268 aa2.46□□□□□ -2.02
SNORD53-201ENST00000579969 SH3GL1Q99961 368 aa2.46□□□□□ -2.02
SNORD53-201ENST00000579969 NUDT22Q9BRQ3 303 aa2.46□□□□□ -2.02
SNORD53-201ENST00000579969 ZPBPQ9BS86 351 aa2.46□□□□□ -2.02
SNORD53-201ENST00000579969 RAB34Q9BZG1 259 aa2.46□□□□□ -2.02
SNORD53-201ENST00000579969 IRX2Q9BZI1 471 aaPredicted RBP2.46□□□□□ -2.02
SNORD53-201ENST00000579969 EDEM3Q9BZQ6 932 aa2.46□□□□□ -2.02
SNORD53-201ENST00000579969 LRRC27Q9C0I9 530 aa2.46□□□□□ -2.02
SNORD53-201ENST00000579969 ING2Q9H160 280 aa2.46□□□□□ -2.02
SNORD53-201ENST00000579969 IKZF4Q9H2S9 585 aa2.46□□□□□ -2.02
SNORD53-201ENST00000579969 PARVGQ9HBI0 331 aa2.46□□□□□ -2.02
SNORD53-201ENST00000579969 LUC7LQ9NQ29 371 aaKnown RBP2.46□□□□□ -2.02
SNORD53-201ENST00000579969 ACSS2Q9NR19 701 aa2.46□□□□□ -2.02
SNORD53-201ENST00000579969 DYRK4Q9NR20 520 aa2.46□□□□□ -2.02
SNORD53-201ENST00000579969 FBXO8Q9NRD0 319 aa2.46□□□□□ -2.02
SNORD53-201ENST00000579969 AGPAT4Q9NRZ5 378 aa2.46□□□□□ -2.02
SNORD53-201ENST00000579969 SEMA3GQ9NS98 782 aa2.46□□□□□ -2.02
SNORD53-201ENST00000579969 KRT82Q9NSB4 513 aa2.46□□□□□ -2.02
SNORD53-201ENST00000579969 SPTLC3Q9NUV7 552 aa2.46□□□□□ -2.02
SNORD53-201ENST00000579969 RBAKQ9NYW8 714 aaPredicted RBP2.46□□□□□ -2.02
SNORD53-201ENST00000579969 KCND2Q9NZV8 630 aa2.46□□□□□ -2.02
SNORD53-201ENST00000579969 RCOR3Q9P2K3 495 aaPredicted RBP2.46□□□□□ -2.02
SNORD53-201ENST00000579969 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.46□□□□□ -2.02
SNORD53-201ENST00000579969 STOML2Q9UJZ1 356 aa2.46□□□□□ -2.02
SNORD53-201ENST00000579969 PNMA8BQ9ULN7 279 aaPredicted RBP2.46□□□□□ -2.02
SNORD53-201ENST00000579969 TMEM184BQ9Y519 407 aaPredicted RBP2.46□□□□□ -2.02
SNORD53-201ENST00000579969 USP3Q9Y6I4 520 aa2.46□□□□□ -2.02
SNORD53-201ENST00000579969 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.46□□□□□ -2.02
SNORD53-201ENST00000579969 VPS13CQ709C8 3753 aa2.46□□□□□ -2.02
SNORD53-201ENST00000579969 MYH11P35749 1972 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 NOTCH1P46531 2555 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 SYCE3A1L190 88 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 FRMD3A2A2Y4 597 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 IGLON5A6NGN9 336 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 ARGFXA6NJG6 315 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 ZNF233A6NK53 670 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 A6NL46 340 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 RHPN2P1A8MT19 583 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 F5H423 210 aaPredicted RBP2.45□□□□□ -2.02
SNORD53-201ENST00000579969 F8VZ95 297 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 KIF2AO00139 706 aaPredicted RBP2.45□□□□□ -2.02
SNORD53-201ENST00000579969 KPNA3O00505 521 aaPredicted RBP2.45□□□□□ -2.02
SNORD53-201ENST00000579969 POLR1CO15160 346 aaPredicted RBP2.45□□□□□ -2.02
SNORD53-201ENST00000579969 ZNF185O15231 689 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 CLIC2O15247 247 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 IRAK2O43187 625 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 CTIFO43310 598 aaKnown RBP2.45□□□□□ -2.02
SNORD53-201ENST00000579969 NUDT21O43809 227 aaKnown RBP2.45□□□□□ -2.02
SNORD53-201ENST00000579969 ATP9BO43861 1147 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 BNIP3LO60238 219 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 KDM1AO60341 852 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 ACSL4O60488 711 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 TBCAO75347 108 aaKnown RBP2.45□□□□□ -2.02
SNORD53-201ENST00000579969 CEACAM4O75871 244 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 MTA2O94776 668 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 RASGRP1O95267 797 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 CD2BP2O95400 341 aaKnown RBP2.45□□□□□ -2.02
SNORD53-201ENST00000579969 LATS1O95835 1130 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 DLGAP3O95886 979 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 TNFP01375 233 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 KRT18P05783 430 aaKnown RBP2.45□□□□□ -2.02
SNORD53-201ENST00000579969 STSP08842 583 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 CCNYL3P0C7X3 344 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 MYBL2P10244 700 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 NAT2P11245 290 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 ZFXP17010 805 aaPredicted RBP2.45□□□□□ -2.02
SNORD53-201ENST00000579969 GARTP22102 1010 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 PSMA5P28066 241 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 ERCC5P28715 1186 aaPredicted RBP2.45□□□□□ -2.02
SNORD53-201ENST00000579969 ADORA2BP29275 332 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 DNAJA1P31689 397 aaKnown RBP2.45□□□□□ -2.02
SNORD53-201ENST00000579969 CHRNA3P32297 505 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 NUMBP49757 651 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 RPS6KA3P51812 740 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 HK3P52790 923 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 IST1P53990 364 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 RPS24P62847 133 aaKnown RBP2.45□□□□□ -2.02
SNORD53-201ENST00000579969 CENPCQ03188 943 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 DEUP1Q05D60 604 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 SULT2A1Q06520 285 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 FOXM1Q08050 763 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 SQSTM1Q13501 440 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 TRPC3Q13507 836 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 CUL4AQ13619 759 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 CDH18Q13634 790 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 MAP7Q14244 749 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 HLTFQ14527 1009 aaKnown RBP eCLIP2.45□□□□□ -2.02
SNORD53-201ENST00000579969 ZNF235Q14590 738 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 SURF1Q15526 300 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 MUM1Q2TAK8 710 aa2.45□□□□□ -2.02
SNORD53-201ENST00000579969 KBTBD12Q3ZCT8 623 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms