RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 PAK5Q9P286 719 aa15.67■□□□□ 0.1
SLC6A4-205ENST00000579221 PPIL1Q9Y3C6 166 aa15.67■□□□□ 0.1
SLC6A4-205ENST00000579221 SHROOM3Q8TF72 1996 aa15.67■□□□□ 0.1
SLC6A4-205ENST00000579221 PRR23AA6NEV1 266 aa15.66■□□□□ 0.1
SLC6A4-205ENST00000579221 F5H423 210 aaPredicted RBP15.66■□□□□ 0.1
SLC6A4-205ENST00000579221 RIOK3O14730 519 aaKnown RBP15.66■□□□□ 0.1
SLC6A4-205ENST00000579221 AREL1O15033 823 aa15.66■□□□□ 0.1
SLC6A4-205ENST00000579221 RNGTTO60942 597 aaKnown RBP15.66■□□□□ 0.1
SLC6A4-205ENST00000579221 URI1O94763 535 aaPredicted RBP15.66■□□□□ 0.1
SLC6A4-205ENST00000579221 FSBPO95073 299 aa15.66■□□□□ 0.1
SLC6A4-205ENST00000579221 EPOP01588 193 aa15.66■□□□□ 0.1
SLC6A4-205ENST00000579221 PDHA1P08559 390 aa15.66■□□□□ 0.1
SLC6A4-205ENST00000579221 CYP2A6P11509 494 aaPredicted RBP15.66■□□□□ 0.1
SLC6A4-205ENST00000579221 PSMB4P28070 264 aa15.66■□□□□ 0.1
SLC6A4-205ENST00000579221 FDFT1P37268 417 aa15.66■□□□□ 0.1
SLC6A4-205ENST00000579221 NBL1P41271 181 aa15.66■□□□□ 0.1
SLC6A4-205ENST00000579221 FNTAP49354 379 aa15.66■□□□□ 0.1
SLC6A4-205ENST00000579221 DHPSP49366 369 aaPredicted RBP15.66■□□□□ 0.1
SLC6A4-205ENST00000579221 CCR5P51681 352 aa15.66■□□□□ 0.1
SLC6A4-205ENST00000579221 WNT3AP56704 352 aa15.66■□□□□ 0.1
SLC6A4-205ENST00000579221 FAM193AP78312 1265 aa15.66■□□□□ 0.1
SLC6A4-205ENST00000579221 TUBB2AQ13885 445 aa15.66■□□□□ 0.1
SLC6A4-205ENST00000579221 TMEM52BQ4KMG9 183 aa15.66■□□□□ 0.1
SLC6A4-205ENST00000579221 PMS2CLQ68D20 193 aa15.66■□□□□ 0.1
SLC6A4-205ENST00000579221 CCDC137Q6PK04 289 aaKnown RBP15.66■□□□□ 0.1
SLC6A4-205ENST00000579221 KDELC2Q7Z4H8 507 aa15.66■□□□□ 0.1
SLC6A4-205ENST00000579221 ZSWIM9Q86XI8 627 aa15.66■□□□□ 0.1
SLC6A4-205ENST00000579221 LPCAT1Q8NF37 534 aa15.66■□□□□ 0.1
SLC6A4-205ENST00000579221 KIF18AQ8NI77 898 aa15.66■□□□□ 0.1
SLC6A4-205ENST00000579221 CXorf40AQ8TE69 158 aa15.66■□□□□ 0.1
SLC6A4-205ENST00000579221 RMDN1Q96DB5 314 aa15.66■□□□□ 0.1
SLC6A4-205ENST00000579221 SCRN2Q96FV2 425 aa15.66■□□□□ 0.1
SLC6A4-205ENST00000579221 RUNDC3BQ96NL0 473 aa15.66■□□□□ 0.1
SLC6A4-205ENST00000579221 TUBB2BQ9BVA1 445 aa15.66■□□□□ 0.1
SLC6A4-205ENST00000579221 FAM86C1Q9NVL1 165 aa15.66■□□□□ 0.1
SLC6A4-205ENST00000579221 CUL9Q8IWT3 2517 aa15.65■□□□□ 0.1
SLC6A4-205ENST00000579221 ZNF318Q5VUA4 2279 aa15.65■□□□□ 0.1
SLC6A4-205ENST00000579221 MEI4A8MW99 385 aa15.65■□□□□ 0.1
SLC6A4-205ENST00000579221 ANKRD66B4E2M5 251 aa15.65■□□□□ 0.1
SLC6A4-205ENST00000579221 CCDC188H7C350 402 aa15.65■□□□□ 0.1
SLC6A4-205ENST00000579221 METTL18O95568 372 aa15.65■□□□□ 0.1
SLC6A4-205ENST00000579221 NDST3O95803 873 aa15.65■□□□□ 0.1
SLC6A4-205ENST00000579221 PRLP01236 227 aa15.65■□□□□ 0.1
SLC6A4-205ENST00000579221 ETS1P14921 441 aa15.65■□□□□ 0.1
SLC6A4-205ENST00000579221 ITIH2P19823 946 aa15.65■□□□□ 0.1
SLC6A4-205ENST00000579221 RPL22P35268 128 aaKnown RBP15.65■□□□□ 0.1
SLC6A4-205ENST00000579221 RPS21P63220 83 aaKnown RBP15.65■□□□□ 0.1
SLC6A4-205ENST00000579221 LRRC73Q5JTD7 316 aa15.65■□□□□ 0.1
SLC6A4-205ENST00000579221 WDR45BQ5MNZ6 344 aa15.65■□□□□ 0.1
SLC6A4-205ENST00000579221 KIAA1161Q6NSJ0 714 aa15.65■□□□□ 0.1
SLC6A4-205ENST00000579221 TTC27Q6P3X3 843 aa15.65■□□□□ 0.1
SLC6A4-205ENST00000579221 KDELC1Q6UW63 502 aa15.65■□□□□ 0.1
SLC6A4-205ENST00000579221 USP45Q70EL2 814 aa15.65■□□□□ 0.1
SLC6A4-205ENST00000579221 TRIM69Q86WT6 500 aa15.65■□□□□ 0.1
SLC6A4-205ENST00000579221 OXNAD1Q96HP4 312 aaPredicted RBP15.65■□□□□ 0.1
SLC6A4-205ENST00000579221 LOXL4Q96JB6 756 aa15.65■□□□□ 0.1
SLC6A4-205ENST00000579221 MLPHQ9BV36 600 aaPredicted RBP15.65■□□□□ 0.1
SLC6A4-205ENST00000579221 CDC23Q9UJX2 597 aa15.65■□□□□ 0.1
SLC6A4-205ENST00000579221 LOC285095A0A1B0GVY8 99 aa15.64■□□□□ 0.09
SLC6A4-205ENST00000579221 A0A1W2PQU0 124 aa15.64■□□□□ 0.09
SLC6A4-205ENST00000579221 PDE2AO00408 941 aaPredicted RBP15.64■□□□□ 0.09
SLC6A4-205ENST00000579221 PRKCGP05129 697 aa15.64■□□□□ 0.09
SLC6A4-205ENST00000579221 ZSCAN5DPP0CG00 497 aa15.64■□□□□ 0.09
SLC6A4-205ENST00000579221 CTPS1P17812 591 aa15.64■□□□□ 0.09
SLC6A4-205ENST00000579221 VIPR1P32241 457 aa15.64■□□□□ 0.09
SLC6A4-205ENST00000579221 NUDT1P36639 197 aa15.64■□□□□ 0.09
SLC6A4-205ENST00000579221 DPP6P42658 865 aa15.64■□□□□ 0.09
SLC6A4-205ENST00000579221 GRIA4P48058 902 aa15.64■□□□□ 0.09
SLC6A4-205ENST00000579221 SGCGQ13326 291 aa15.64■□□□□ 0.09
SLC6A4-205ENST00000579221 QPCTQ16769 361 aa15.64■□□□□ 0.09
SLC6A4-205ENST00000579221 LYSMD4Q5XG99 296 aa15.64■□□□□ 0.09
SLC6A4-205ENST00000579221 DPPA4Q7L190 304 aa15.64■□□□□ 0.09
SLC6A4-205ENST00000579221 HORMAD1Q86X24 394 aa15.64■□□□□ 0.09
SLC6A4-205ENST00000579221 SLC41A1Q8IVJ1 513 aa15.64■□□□□ 0.09
SLC6A4-205ENST00000579221 RGL4Q8IZJ4 473 aa15.64■□□□□ 0.09
SLC6A4-205ENST00000579221 IPMKQ8NFU5 416 aa15.64■□□□□ 0.09
SLC6A4-205ENST00000579221 BIRC7Q96CA5 298 aa15.64■□□□□ 0.09
SLC6A4-205ENST00000579221 MRGPRX2Q96LB1 330 aa15.64■□□□□ 0.09
SLC6A4-205ENST00000579221 HSPA12BQ96MM6 686 aa15.64■□□□□ 0.09
SLC6A4-205ENST00000579221 TRIB3Q96RU7 358 aa15.64■□□□□ 0.09
SLC6A4-205ENST00000579221 SRPK1Q96SB4 655 aaKnown RBP15.64■□□□□ 0.09
SLC6A4-205ENST00000579221 FSD1LQ9BXM9 530 aa15.64■□□□□ 0.09
SLC6A4-205ENST00000579221 ETNK1Q9HBU6 452 aa15.64■□□□□ 0.09
SLC6A4-205ENST00000579221 ITM2BQ9Y287 266 aa15.64■□□□□ 0.09
SLC6A4-205ENST00000579221 A0A0J9YYE9 177 aa15.63■□□□□ 0.09
SLC6A4-205ENST00000579221 A8MX80 341 aa15.63■□□□□ 0.09
SLC6A4-205ENST00000579221 MMP20O60882 483 aa15.63■□□□□ 0.09
SLC6A4-205ENST00000579221 GAS8O95995 478 aa15.63■□□□□ 0.09
SLC6A4-205ENST00000579221 TRBC1P01850 177 aa15.63■□□□□ 0.09
SLC6A4-205ENST00000579221 KRT14P02533 472 aa15.63■□□□□ 0.09
SLC6A4-205ENST00000579221 IGHV4-34P06331 123 aa15.63■□□□□ 0.09
SLC6A4-205ENST00000579221 DEKP35659 375 aaKnown RBP15.63■□□□□ 0.09
SLC6A4-205ENST00000579221 HNF1BP35680 557 aa15.63■□□□□ 0.09
SLC6A4-205ENST00000579221 MMP12P39900 470 aa15.63■□□□□ 0.09
SLC6A4-205ENST00000579221 PTGER3P43115 390 aa15.63■□□□□ 0.09
SLC6A4-205ENST00000579221 LMAN1P49257 510 aa15.63■□□□□ 0.09
SLC6A4-205ENST00000579221 CKAP4Q07065 602 aaKnown RBP15.63■□□□□ 0.09
SLC6A4-205ENST00000579221 GALNT3Q14435 633 aa15.63■□□□□ 0.09
SLC6A4-205ENST00000579221 LPAL2Q16609 132 aa15.63■□□□□ 0.09
SLC6A4-205ENST00000579221 LAIR1Q6GTX8 287 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms