RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 RALGPS1Q5JS13 557 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 ARMC12Q5T9G4 340 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 KDELC2Q7Z4H8 507 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 PIP4P1Q86T03 277 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 CCDC13Q8IYE1 715 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 PQLC3Q8N755 202 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 OR13H1Q8NG92 308 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 TPCN2Q8NHX9 752 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 FAM71BQ8TC56 605 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 LRRN4Q8WUT4 740 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 ASB12Q8WXK4 309 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 P3H4Q92791 437 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 RBM41Q96IZ5 413 aaKnown RBP6.6□□□□□ -1.35
TRAF4-213ENST00000578917 TSGA13Q96PP4 275 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 LENG8Q96PV6 779 aaPredicted RBP6.6□□□□□ -1.35
TRAF4-213ENST00000578917 NUDCD1Q96RS6 583 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 LGMNQ99538 433 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 HEMGNQ9BXL5 484 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 GOLPH3Q9H4A6 298 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 ERVMER34-1Q9H9K5 563 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 GOLGA6AQ9NYA3 693 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 DTLQ9NZJ0 730 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 FTSJ1Q9UET6 329 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 ANGPTL2Q9UKU9 493 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 PCOLCE2Q9UKZ9 415 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 ATP8A1Q9Y2Q0 1164 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 COQ6Q9Y2Z9 468 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 DUSP10Q9Y6W6 482 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 NUMA1Q14980 2115 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 ZNF487B1APH4 448 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 H3BM21 787 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 RAD51BO15315 384 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 FFAR2O15552 330 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 TNFSF14O43557 240 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 PSTPIP1O43586 416 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 SOCS5O75159 536 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 RECQL5O94762 991 aaPredicted RBP6.59□□□□□ -1.35
TRAF4-213ENST00000578917 TRIM16O95361 564 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 PEX11BO96011 259 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 CPP00450 1065 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 ALPPL2P10696 532 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 CYP2A6P11509 494 aaPredicted RBP6.59□□□□□ -1.35
TRAF4-213ENST00000578917 C6P13671 934 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 CTSEP14091 401 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 CTPS1P17812 591 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 RXRGP48443 463 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 NR2C2P49116 596 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 VAV2P52735 878 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 HADHBP55084 474 aaKnown RBP6.59□□□□□ -1.35
TRAF4-213ENST00000578917 HNRNPKP61978 463 aaKnown RBP eCLIP6.59□□□□□ -1.35
TRAF4-213ENST00000578917 SLC10A2Q12908 348 aaPredicted RBP6.59□□□□□ -1.35
TRAF4-213ENST00000578917 INPP5AQ14642 412 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 TMEM52BQ4KMG9 183 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 TFDP3Q5H9I0 405 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 FAXCQ5TGI0 409 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 C11orf63Q6NUN7 778 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 MFSD7Q6UXD7 560 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 NPNTQ6UXI9 565 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 RAD9BQ6WBX8 426 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 SPOCD1Q6ZMY3 1216 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 GCNT7Q6ZNI0 430 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 USP45Q70EL2 814 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 RD3Q7Z3Z2 195 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 PEX26Q7Z412 305 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 VSIG1Q86XK7 387 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 SPATS2Q86XZ4 545 aaKnown RBP6.59□□□□□ -1.35
TRAF4-213ENST00000578917 SYCE1Q8N0S2 351 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 PGBD5Q8N414 524 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 UBL4BQ8N7F7 174 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 PLD5Q8N7P1 536 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 PNPLA1Q8N8W4 532 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 TMEM145Q8NBT3 493 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 ACRBPQ8NEB7 543 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 ATL2Q8NHH9 583 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 SAP25Q8TEE9 199 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 TFB1MQ8WVM0 346 aaKnown RBP6.59□□□□□ -1.35
TRAF4-213ENST00000578917 ANP32BQ92688 251 aaKnown RBP6.59□□□□□ -1.35
TRAF4-213ENST00000578917 CENPTQ96BT3 561 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 FAF2Q96CS3 445 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 IFT43Q96FT9 208 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 BMFQ96LC9 184 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 AGAP3Q96P47 875 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 MGME1Q9BQP7 344 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 DESI2Q9BSY9 194 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 ADGRE3Q9BY15 652 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 SLC13A1Q9BZW2 595 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 BRD8Q9H0E9 1235 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 SAE1Q9UBE0 346 aaPredicted RBP6.59□□□□□ -1.35
TRAF4-213ENST00000578917 AMACRQ9UHK6 382 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 MOSPD1Q9UJG1 213 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 PHTF1Q9UMS5 762 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 DOLKQ9UPQ8 538 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 BTBD3Q9Y2F9 522 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 RAI2Q9Y5P3 530 aa6.59□□□□□ -1.35
TRAF4-213ENST00000578917 DCHS1Q96JQ0 3298 aa6.58□□□□□ -1.36
TRAF4-213ENST00000578917 SPTY2D1-AS1A0A0U1RR47 76 aa6.58□□□□□ -1.36
TRAF4-213ENST00000578917 TSPAN11A1L157 253 aa6.58□□□□□ -1.36
TRAF4-213ENST00000578917 CCDC66A2RUB6 948 aa6.58□□□□□ -1.36
TRAF4-213ENST00000578917 RCCD1A6NED2 376 aa6.58□□□□□ -1.36
TRAF4-213ENST00000578917 GOLGA6L9A6NEM1 432 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms