RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 ARMC12Q5T9G4 340 aa14.04□□□□□ -0.16
CSNK1D-209ENST00000578904 LRIG3Q6UXM1 1119 aa14.04□□□□□ -0.16
CSNK1D-209ENST00000578904 NLRP9Q7RTR0 991 aa14.04□□□□□ -0.16
CSNK1D-209ENST00000578904 BMP8AQ7Z5Y6 402 aa14.04□□□□□ -0.16
CSNK1D-209ENST00000578904 MTERF4Q7Z6M4 381 aaKnown RBP14.04□□□□□ -0.16
CSNK1D-209ENST00000578904 FBXL6Q8N531 539 aa14.04□□□□□ -0.16
CSNK1D-209ENST00000578904 ZNF366Q8N895 744 aa14.04□□□□□ -0.16
CSNK1D-209ENST00000578904 FBXO36Q8NEA4 188 aa14.04□□□□□ -0.16
CSNK1D-209ENST00000578904 PPHLN1Q8NEY8 458 aaKnown RBP14.04□□□□□ -0.16
CSNK1D-209ENST00000578904 MYO19Q96H55 970 aa14.04□□□□□ -0.16
CSNK1D-209ENST00000578904 ZNF419Q96HQ0 510 aaPredicted RBP14.04□□□□□ -0.16
CSNK1D-209ENST00000578904 EXOC2Q96KP1 924 aa14.04□□□□□ -0.16
CSNK1D-209ENST00000578904 C9orf72Q96LT7 481 aa14.04□□□□□ -0.16
CSNK1D-209ENST00000578904 ZNF641Q96N77 438 aaPredicted RBP14.04□□□□□ -0.16
CSNK1D-209ENST00000578904 OSBPL1AQ9BXW6 950 aa14.04□□□□□ -0.16
CSNK1D-209ENST00000578904 TM6SF2Q9BZW4 377 aa14.04□□□□□ -0.16
CSNK1D-209ENST00000578904 TMEM245Q9H330 911 aa14.04□□□□□ -0.16
CSNK1D-209ENST00000578904 SEMA4AQ9H3S1 761 aa14.04□□□□□ -0.16
CSNK1D-209ENST00000578904 VPS37BQ9H9H4 285 aa14.04□□□□□ -0.16
CSNK1D-209ENST00000578904 HACD3Q9P035 362 aa14.04□□□□□ -0.16
CSNK1D-209ENST00000578904 HECAQ9UBI9 543 aaPredicted RBP14.04□□□□□ -0.16
CSNK1D-209ENST00000578904 SLCO3A1Q9UIG8 710 aa14.04□□□□□ -0.16
CSNK1D-209ENST00000578904 MMP17Q9ULZ9 603 aa14.04□□□□□ -0.16
CSNK1D-209ENST00000578904 RAI2Q9Y5P3 530 aa14.04□□□□□ -0.16
CSNK1D-209ENST00000578904 TEX264Q9Y6I9 313 aa14.04□□□□□ -0.16
CSNK1D-209ENST00000578904 EDDM13A0A1B0GTR0 161 aa14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 HEATR9A2RTY3 570 aa14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 TTC34A8MYJ7 566 aa14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 WASH3PC4AMC7 463 aa14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 K7ERQ8 282 aa14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 MUSKO15146 869 aa14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 RIPK2O43353 540 aa14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 SMAD6O43541 496 aaKnown RBP14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 OPA1O60313 960 aa14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 SYNCRIPO60506 623 aaKnown RBP14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 AGTP01019 485 aa14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 PGAM1P18669 254 aa14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 PAMP19021 973 aa14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 ADRA1DP25100 572 aa14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 MGAT1P26572 445 aa14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 POLR2LP62875 67 aaKnown RBP14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 PDE1BQ01064 536 aa14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 ENPP2Q13822 863 aa14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 GAS6Q14393 721 aa14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 STAT4Q14765 748 aa14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 STARD3Q14849 445 aa14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 KYNUQ16719 465 aa14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 PCID2Q5JVF3 399 aa14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 C3orf62Q6ZUJ4 267 aa14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 ZNF534Q76KX8 674 aa14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 DSG4Q86SJ6 1040 aa14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 ANKMY2Q8IV38 441 aa14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 RMDN1Q96DB5 314 aa14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 SIGLEC10Q96LC7 697 aa14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 PWWP2AQ96N64 755 aa14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 GABRG3Q99928 467 aa14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 GORASP1Q9BQQ3 440 aa14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 HEPHQ9BQS7 1158 aa14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 TDRD1Q9BXT4 1180 aaKnown RBP14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 FUT8Q9BYC5 575 aa14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 MRM3Q9HC36 420 aaKnown RBP14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 NINJ2Q9NZG7 142 aa14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 DLGAP2Q9P1A6 1054 aa14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 CHMP2BQ9UQN3 213 aa14.03□□□□□ -0.16
CSNK1D-209ENST00000578904 ATG2BQ96BY7 2078 aa14.02□□□□□ -0.16
CSNK1D-209ENST00000578904 FAM237BA0A1B0GVD1 139 aa14.02□□□□□ -0.17
CSNK1D-209ENST00000578904 BNIP3LO60238 219 aa14.02□□□□□ -0.17
CSNK1D-209ENST00000578904 ADAM23O75077 832 aa14.02□□□□□ -0.17
CSNK1D-209ENST00000578904 USP12O75317 370 aa14.02□□□□□ -0.17
CSNK1D-209ENST00000578904 AVILO75366 819 aa14.02□□□□□ -0.17
CSNK1D-209ENST00000578904 ACSL3O95573 720 aa14.02□□□□□ -0.17
CSNK1D-209ENST00000578904 CRTAMO95727 393 aa14.02□□□□□ -0.17
CSNK1D-209ENST00000578904 NUDT17P0C025 328 aa14.02□□□□□ -0.17
CSNK1D-209ENST00000578904 GRIA4P48058 902 aa14.02□□□□□ -0.17
CSNK1D-209ENST00000578904 MTAPQ13126 283 aa14.02□□□□□ -0.17
CSNK1D-209ENST00000578904 SLC29A2Q14542 456 aa14.02□□□□□ -0.17
CSNK1D-209ENST00000578904 KLHL38Q2WGJ6 581 aa14.02□□□□□ -0.17
CSNK1D-209ENST00000578904 HNRNPA1L2Q32P51 320 aaKnown RBP14.02□□□□□ -0.17
CSNK1D-209ENST00000578904 HSP90B2PQ58FF3 399 aa14.02□□□□□ -0.17
CSNK1D-209ENST00000578904 SPANXN3Q5MJ09 141 aa14.02□□□□□ -0.17
CSNK1D-209ENST00000578904 ATXN7L2Q5T6C5 722 aaPredicted RBP14.02□□□□□ -0.17
CSNK1D-209ENST00000578904 Q6ZVU0 165 aa14.02□□□□□ -0.17
CSNK1D-209ENST00000578904 SYT13Q7L8C5 426 aa14.02□□□□□ -0.17
CSNK1D-209ENST00000578904 KDELC2Q7Z4H8 507 aa14.02□□□□□ -0.17
CSNK1D-209ENST00000578904 SPEM1Q8N4L4 309 aa14.02□□□□□ -0.17
CSNK1D-209ENST00000578904 SLC25A41Q8N5S1 370 aa14.02□□□□□ -0.17
CSNK1D-209ENST00000578904 TMEM105Q8N8V8 129 aa14.02□□□□□ -0.17
CSNK1D-209ENST00000578904 GSDMBQ8TAX9 411 aa14.02□□□□□ -0.17
CSNK1D-209ENST00000578904 PDCD6IPQ8WUM4 868 aaKnown RBP14.02□□□□□ -0.17
CSNK1D-209ENST00000578904 CDKL2Q92772 493 aa14.02□□□□□ -0.17
CSNK1D-209ENST00000578904 PEX13Q92968 403 aa14.02□□□□□ -0.17
CSNK1D-209ENST00000578904 ERLEC1Q96DZ1 483 aa14.02□□□□□ -0.17
CSNK1D-209ENST00000578904 RANBP9Q96S59 729 aa14.02□□□□□ -0.17
CSNK1D-209ENST00000578904 APOL2Q9BQE5 337 aa14.02□□□□□ -0.17
CSNK1D-209ENST00000578904 ROPN1BQ9BZX4 212 aaPredicted RBP14.02□□□□□ -0.17
CSNK1D-209ENST00000578904 TNKS2Q9H2K2 1166 aa14.02□□□□□ -0.17
CSNK1D-209ENST00000578904 ROPN1Q9HAT0 212 aaPredicted RBP14.02□□□□□ -0.17
CSNK1D-209ENST00000578904 SPATA6Q9NWH7 488 aaPredicted RBP14.02□□□□□ -0.17
CSNK1D-209ENST00000578904 EVLQ9UI08 416 aaPredicted RBP14.02□□□□□ -0.17
CSNK1D-209ENST00000578904 PLAAQ9Y263 795 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms