RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 TMEM150AQ86TG1 271 aa11.19□□□□□ -0.62
SKA2-204ENST00000578519 EFHBQ8N7U6 833 aa11.19□□□□□ -0.62
SKA2-204ENST00000578519 KIAA1958Q8N8K9 716 aa11.19□□□□□ -0.62
SKA2-204ENST00000578519 GPATCH11Q8N954 259 aa11.19□□□□□ -0.62
SKA2-204ENST00000578519 FIBINQ8TAL6 211 aa11.19□□□□□ -0.62
SKA2-204ENST00000578519 PIWIL2Q8TC59 973 aaKnown RBP11.19□□□□□ -0.62
SKA2-204ENST00000578519 HDAC10Q969S8 669 aa11.19□□□□□ -0.62
SKA2-204ENST00000578519 OTUB2Q96DC9 234 aa11.19□□□□□ -0.62
SKA2-204ENST00000578519 ATXN7L3BQ96GX2 97 aa11.19□□□□□ -0.62
SKA2-204ENST00000578519 CYP2S1Q96SQ9 504 aa11.19□□□□□ -0.62
SKA2-204ENST00000578519 MRPL57Q9BQC6 102 aaKnown RBP11.19□□□□□ -0.62
SKA2-204ENST00000578519 MCMBPQ9BTE3 642 aa11.19□□□□□ -0.62
SKA2-204ENST00000578519 POPDC3Q9HBV1 291 aa11.19□□□□□ -0.62
SKA2-204ENST00000578519 NOD2Q9HC29 1040 aa11.19□□□□□ -0.62
SKA2-204ENST00000578519 CATSPERZQ9NTU4 200 aa11.19□□□□□ -0.62
SKA2-204ENST00000578519 MRGBPQ9NV56 204 aa11.19□□□□□ -0.62
SKA2-204ENST00000578519 NLE1Q9NVX2 485 aaPredicted RBP11.19□□□□□ -0.62
SKA2-204ENST00000578519 TMEM216Q9P0N5 145 aa11.19□□□□□ -0.62
SKA2-204ENST00000578519 CFAP97Q9P2B7 532 aa11.19□□□□□ -0.62
SKA2-204ENST00000578519 SLC12A4Q9UP95 1085 aa11.19□□□□□ -0.62
SKA2-204ENST00000578519 RAI2Q9Y5P3 530 aa11.19□□□□□ -0.62
SKA2-204ENST00000578519 COMMD10Q9Y6G5 202 aa11.19□□□□□ -0.62
SKA2-204ENST00000578519 GREB1Q4ZG55 1949 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 A0A0G2JND7 137 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 CCDC189A1A4V9 331 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 CCDC78A2IDD5 438 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 C2orf71A6NGG8 1288 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 CD3EAPO15446 510 aaKnown RBP11.18□□□□□ -0.62
SKA2-204ENST00000578519 TMCC1O94876 653 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 HAUS5O94927 633 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 KLHL2O95198 593 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 HSPA4LO95757 839 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 IGSF6O95976 241 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 POU2F2P09086 479 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 SPATA31D3P0C874 917 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 CR2P20023 1033 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 C1QTNF8P60827 252 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 NAA20P61599 178 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 IRX4P78413 519 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 CYP4F8P98187 520 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 CTBP1Q13363 440 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 GPR158Q5T848 1215 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 ARMC12Q5T9G4 340 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 PLPP4Q5VZY2 271 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 C16orf46Q6P387 395 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 NCEH1Q6PIU2 408 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 ZYG11AQ6WRX3 759 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 SPATA31D4Q6ZUB0 917 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 PTAR1Q7Z6K3 402 aaPredicted RBP11.18□□□□□ -0.62
SKA2-204ENST00000578519 CMC1Q7Z7K0 106 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 TMC8Q8IU68 726 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 CILP2Q8IUL8 1156 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 SLC22A9Q8IVM8 553 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 STK40Q8N2I9 435 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 OR4L1Q8NH43 312 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 PDCD6IPQ8WUM4 868 aaKnown RBP11.18□□□□□ -0.62
SKA2-204ENST00000578519 POF1BQ8WVV4 589 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 INPP5DQ92835 1189 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 KLHL29Q96CT2 875 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 MYEOVQ96EZ4 313 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 ZFRQ96KR1 1074 aaKnown RBP11.18□□□□□ -0.62
SKA2-204ENST00000578519 ZNF778Q96MU6 729 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 RILPQ96NA2 401 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 TMEM120AQ9BXJ8 343 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 TDRD1Q9BXT4 1180 aaKnown RBP11.18□□□□□ -0.62
SKA2-204ENST00000578519 C12orf65Q9H3J6 166 aaKnown RBP11.18□□□□□ -0.62
SKA2-204ENST00000578519 ECT2Q9H8V3 914 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 SYTL2Q9HCH5 934 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 ABCF3Q9NUQ8 709 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 IL1RAPL1Q9NZN1 696 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 SLC17A6Q9P2U8 582 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 SLC2A6Q9UGQ3 507 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 DCTN4Q9UJW0 460 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 SLC8A2Q9UPR5 921 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.18□□□□□ -0.62
SKA2-204ENST00000578519 VWA7Q9Y334 891 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 PKP3Q9Y446 797 aa11.18□□□□□ -0.62
SKA2-204ENST00000578519 ZNF638Q14966 1978 aaKnown RBP11.17□□□□□ -0.62
SKA2-204ENST00000578519 GOLGA8QA0A0J9YX86 632 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 A0A1W2PRU2 124 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 GOLGA8OA6NCC3 632 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 C5orf67F2Z3F1 127 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 GOLGA8NF8WBI6 632 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 GOLGA8TH3BQL2 631 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 LEFTY2O00292 366 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 GFRA2O00451 464 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 GRM6O15303 877 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 STX7O15400 261 aaKnown RBP11.17□□□□□ -0.62
SKA2-204ENST00000578519 LDB2O43679 373 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 NDUFS3O75489 264 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 PYGLP06737 847 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 LTA4HP09960 611 aaKnown RBP11.17□□□□□ -0.62
SKA2-204ENST00000578519 PSMA3P25788 255 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 CSKP41240 450 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 GRIA4P48058 902 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 EPHA5P54756 1037 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 PTPN5P54829 565 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 SNRPD1P62314 119 aaKnown RBP11.17□□□□□ -0.62
SKA2-204ENST00000578519 BCL2L1Q07817 233 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 SF3A3Q12874 501 aaKnown RBP eCLIP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms