RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 MCRS1Q96EZ8 462 aa12.1□□□□□ -0.47
ERBB2-206ENST00000578373 PEBP4Q96S96 227 aa12.1□□□□□ -0.47
ERBB2-206ENST00000578373 FTHL17Q9BXU8 183 aa12.1□□□□□ -0.47
ERBB2-206ENST00000578373 CNGB3Q9NQW8 809 aa12.1□□□□□ -0.47
ERBB2-206ENST00000578373 MTF2Q9Y483 593 aaPredicted RBP12.1□□□□□ -0.47
ERBB2-206ENST00000578373 PCDHB9Q9Y5E1 797 aa12.1□□□□□ -0.47
ERBB2-206ENST00000578373 OR51F1A6NGY5 319 aa12.1□□□□□ -0.47
ERBB2-206ENST00000578373 KRT6AP02538 564 aa12.1□□□□□ -0.47
ERBB2-206ENST00000578373 KRT6BP04259 564 aa12.1□□□□□ -0.47
ERBB2-206ENST00000578373 GSTM1P09488 218 aa12.1□□□□□ -0.47
ERBB2-206ENST00000578373 OCM2P0CE71 109 aa12.1□□□□□ -0.47
ERBB2-206ENST00000578373 OCMP0CE72 109 aaPredicted RBP12.1□□□□□ -0.47
ERBB2-206ENST00000578373 DARSP14868 501 aaKnown RBP12.1□□□□□ -0.47
ERBB2-206ENST00000578373 PTPN3P26045 913 aa12.1□□□□□ -0.47
ERBB2-206ENST00000578373 L1CAMP32004 1257 aa12.1□□□□□ -0.47
ERBB2-206ENST00000578373 KRT6CP48668 564 aa12.1□□□□□ -0.47
ERBB2-206ENST00000578373 EIF2B2P49770 351 aaKnown RBP12.1□□□□□ -0.47
ERBB2-206ENST00000578373 CLCNKBP51801 687 aa12.1□□□□□ -0.47
ERBB2-206ENST00000578373 ZNF618Q5T7W0 954 aa12.1□□□□□ -0.47
ERBB2-206ENST00000578373 DENND1CQ8IV53 801 aa12.1□□□□□ -0.47
ERBB2-206ENST00000578373 OR8H2Q8N162 312 aa12.1□□□□□ -0.47
ERBB2-206ENST00000578373 SCAMP5Q8TAC9 235 aa12.1□□□□□ -0.47
ERBB2-206ENST00000578373 PLEKHG4BQ96PX9 1271 aa12.1□□□□□ -0.47
ERBB2-206ENST00000578373 RTKNQ9BST9 563 aa12.1□□□□□ -0.47
ERBB2-206ENST00000578373 FAM105AQ9NUU6 356 aa12.1□□□□□ -0.47
ERBB2-206ENST00000578373 C6orf203Q9P0P8 240 aaPredicted RBP12.1□□□□□ -0.47
ERBB2-206ENST00000578373 SEPT3Q9UH03 358 aa12.1□□□□□ -0.47
ERBB2-206ENST00000578373 LMO7Q8WWI1 1683 aa12.1□□□□□ -0.47
ERBB2-206ENST00000578373 FAM20BO75063 409 aa12.1□□□□□ -0.47
ERBB2-206ENST00000578373 TCEA3O75764 348 aa12.1□□□□□ -0.47
ERBB2-206ENST00000578373 GSNP06396 782 aa12.1□□□□□ -0.47
ERBB2-206ENST00000578373 ZNF37AP17032 561 aaPredicted RBP12.1□□□□□ -0.47
ERBB2-206ENST00000578373 ADSLP30566 484 aaPredicted RBP12.1□□□□□ -0.47
ERBB2-206ENST00000578373 PSEN1P49768 467 aa12.1□□□□□ -0.47
ERBB2-206ENST00000578373 PPP1R8Q12972 351 aaKnown RBP12.1□□□□□ -0.47
ERBB2-206ENST00000578373 SQLEQ14534 574 aa12.1□□□□□ -0.47
ERBB2-206ENST00000578373 STXBP5Q5T5C0 1151 aa12.1□□□□□ -0.47
ERBB2-206ENST00000578373 HFE2Q6ZVN8 426 aa12.1□□□□□ -0.47
ERBB2-206ENST00000578373 GPR142Q7Z601 462 aa12.1□□□□□ -0.47
ERBB2-206ENST00000578373 DQX1Q8TE96 717 aaKnown RBP12.1□□□□□ -0.47
ERBB2-206ENST00000578373 PLEKHA8Q96JA3 519 aa12.1□□□□□ -0.47
ERBB2-206ENST00000578373 ASB8Q9H765 288 aa12.1□□□□□ -0.47
ERBB2-206ENST00000578373 PPP2R3BQ9Y5P8 575 aa12.1□□□□□ -0.47
ERBB2-206ENST00000578373 RAD51BO15315 384 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 EDIL3O43854 480 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 DNAJA2O60884 412 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 AP2A1O95782 977 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 NCK1P16333 377 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 XRCC1P18887 633 aaPredicted RBP12.09□□□□□ -0.47
ERBB2-206ENST00000578373 S100A3P33764 101 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 ELMSAN1Q6PJG2 1045 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 CNSTQ6PJW8 725 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 PAOXQ6QHF9 649 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 FRMD7Q6ZUT3 714 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 SYTL1Q8IYJ3 562 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 VPS33AQ96AX1 596 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 PCED1BQ96HM7 432 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 OPTCQ9UBM4 332 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 CIDEBQ9UHD4 219 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 TMEM114B3SHH9 223 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 GCATO75600 419 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 USP2O75604 605 aaPredicted RBP12.09□□□□□ -0.47
ERBB2-206ENST00000578373 ZNF7P17097 686 aaPredicted RBP12.09□□□□□ -0.47
ERBB2-206ENST00000578373 CLCN5P51795 746 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 ACTR3P61158 418 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 MAP3K10Q02779 954 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 SLC25A11Q02978 314 aaKnown RBP12.09□□□□□ -0.47
ERBB2-206ENST00000578373 MAPKAPK3Q16644 382 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 CCDC142Q17RM4 750 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 TMEM26Q6ZUK4 368 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 ZC3H3Q8IXZ2 948 aaKnown RBP12.09□□□□□ -0.47
ERBB2-206ENST00000578373 CLYBLQ8N0X4 340 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 EID3Q8N140 333 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 CBR4Q8N4T8 237 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 SELENOMQ8WWX9 145 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 DGCR14Q96DF8 476 aaKnown RBP12.09□□□□□ -0.47
ERBB2-206ENST00000578373 FZD8Q9H461 694 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 NOL6Q9H6R4 1146 aaKnown RBP12.09□□□□□ -0.47
ERBB2-206ENST00000578373 RMND5AQ9H871 391 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 COMMD3-BMI1R4GMX3 469 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 SPEF2Q9C093 1822 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 SMIM31A0A1B0GVY4 71 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 ATP5BP06576 529 aaKnown RBP12.09□□□□□ -0.47
ERBB2-206ENST00000578373 GPC1P35052 558 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 THOP1P52888 689 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 CDK18Q07002 472 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 TRIM25Q14258 630 aaKnown RBP12.09□□□□□ -0.47
ERBB2-206ENST00000578373 TMEM86AQ8N2M4 240 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 HEXDCQ8WVB3 486 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 CASP10Q92851 521 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 GORASP1Q9BQQ3 440 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 AGO3Q9H9G7 860 aaKnown RBP12.09□□□□□ -0.47
ERBB2-206ENST00000578373 TRPV2Q9Y5S1 764 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 IQCF5A8MTL0 148 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 AXLP30530 894 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 CHI3L1P36222 383 aaPredicted RBP12.09□□□□□ -0.47
ERBB2-206ENST00000578373 ALDH6A1Q02252 535 aaKnown RBP12.09□□□□□ -0.47
ERBB2-206ENST00000578373 DLG1Q12959 904 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 PLD1Q13393 1074 aa12.09□□□□□ -0.47
ERBB2-206ENST00000578373 OR4K2Q8NGD2 314 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms