RNA–Protein interactions for RNA: ENST00000578328.6

IKBKE-201, Transcript of inhibitor of nuclear factor kappa B kinase subunit epsilon, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene IKBKE, Length 2,493 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKE-201ENST00000578328 C7orf26Q96N11 449 aa13.9□□□□□ -0.18
IKBKE-201ENST00000578328 RILPQ96NA2 401 aa13.9□□□□□ -0.18
IKBKE-201ENST00000578328 TUBB6Q9BUF5 446 aa13.9□□□□□ -0.18
IKBKE-201ENST00000578328 CCDC106Q9BWC9 280 aa13.9□□□□□ -0.18
IKBKE-201ENST00000578328 ARNT2Q9HBZ2 717 aa13.9□□□□□ -0.18
IKBKE-201ENST00000578328 ATP13A1Q9HD20 1204 aa13.9□□□□□ -0.18
IKBKE-201ENST00000578328 PDE4DIPQ5VU43 2346 aa13.9□□□□□ -0.18
IKBKE-201ENST00000578328 CCL22O00626 93 aa13.89□□□□□ -0.19
IKBKE-201ENST00000578328 PHGDHO43175 533 aaKnown RBP13.89□□□□□ -0.19
IKBKE-201ENST00000578328 ITM2AO43736 263 aa13.89□□□□□ -0.19
IKBKE-201ENST00000578328 TM7SF2O76062 418 aa13.89□□□□□ -0.19
IKBKE-201ENST00000578328 FGF3P11487 239 aaPredicted RBP13.89□□□□□ -0.19
IKBKE-201ENST00000578328 SLC1A2P43004 574 aa13.89□□□□□ -0.19
IKBKE-201ENST00000578328 ACTR3P61158 418 aa13.89□□□□□ -0.19
IKBKE-201ENST00000578328 USP10Q14694 798 aaKnown RBP13.89□□□□□ -0.19
IKBKE-201ENST00000578328 VEPH1Q14D04 833 aa13.89□□□□□ -0.19
IKBKE-201ENST00000578328 INSCQ1MX18 579 aa13.89□□□□□ -0.19
IKBKE-201ENST00000578328 SIRPB2Q5JXA9 342 aa13.89□□□□□ -0.19
IKBKE-201ENST00000578328 TMCO4Q5TGY1 634 aa13.89□□□□□ -0.19
IKBKE-201ENST00000578328 ZNF470Q6ECI4 717 aa13.89□□□□□ -0.19
IKBKE-201ENST00000578328 KLHDC10Q6PID8 442 aa13.89□□□□□ -0.19
IKBKE-201ENST00000578328 CCDC117Q8IWD4 279 aaPredicted RBP13.89□□□□□ -0.19
IKBKE-201ENST00000578328 SLC22A12Q96S37 553 aa13.89□□□□□ -0.19
IKBKE-201ENST00000578328 YME1L1Q96TA2 773 aa13.89□□□□□ -0.19
IKBKE-201ENST00000578328 ECSITQ9BQ95 431 aa13.89□□□□□ -0.19
IKBKE-201ENST00000578328 POLR1EQ9GZS1 481 aaKnown RBP13.89□□□□□ -0.19
IKBKE-201ENST00000578328 RHOJQ9H4E5 214 aa13.89□□□□□ -0.19
IKBKE-201ENST00000578328 TRPC7Q9HCX4 862 aa13.89□□□□□ -0.19
IKBKE-201ENST00000578328 CPSF2Q9P2I0 782 aaKnown RBP13.89□□□□□ -0.19
IKBKE-201ENST00000578328 COPG2Q9UBF2 871 aa13.89□□□□□ -0.19
IKBKE-201ENST00000578328 AGO1Q9UL18 857 aaKnown RBP13.89□□□□□ -0.19
IKBKE-201ENST00000578328 CHD5Q8TDI0 1954 aa13.89□□□□□ -0.19
IKBKE-201ENST00000578328 KLHL33A6NCF5 533 aa13.89□□□□□ -0.19
IKBKE-201ENST00000578328 H3BNC9 293 aa13.89□□□□□ -0.19
IKBKE-201ENST00000578328 MAGEC1O60732 1142 aa13.89□□□□□ -0.19
IKBKE-201ENST00000578328 SNNO75324 88 aaPredicted RBP13.89□□□□□ -0.19
IKBKE-201ENST00000578328 PDE5AO76074 875 aa13.89□□□□□ -0.19
IKBKE-201ENST00000578328 TIMP1P01033 207 aa13.89□□□□□ -0.19
IKBKE-201ENST00000578328 RAG1P15918 1043 aa13.89□□□□□ -0.19
IKBKE-201ENST00000578328 HOXD9P28356 352 aaPredicted RBP13.89□□□□□ -0.19
IKBKE-201ENST00000578328 GSTT1P30711 240 aa13.89□□□□□ -0.19
IKBKE-201ENST00000578328 CDH4P55283 916 aa13.89□□□□□ -0.19
IKBKE-201ENST00000578328 MTA1Q13330 715 aa13.89□□□□□ -0.19
IKBKE-201ENST00000578328 MSLNQ13421 630 aaPredicted RBP13.89□□□□□ -0.19
IKBKE-201ENST00000578328 RAB33AQ14088 237 aa13.89□□□□□ -0.19
IKBKE-201ENST00000578328 C5orf22Q49AR2 442 aa13.89□□□□□ -0.19
IKBKE-201ENST00000578328 TMEM150AQ86TG1 271 aa13.89□□□□□ -0.19
IKBKE-201ENST00000578328 PTCD2Q8WV60 388 aaKnown RBP13.89□□□□□ -0.19
IKBKE-201ENST00000578328 CCDC124Q96CT7 223 aaKnown RBP13.89□□□□□ -0.19
IKBKE-201ENST00000578328 GPR22Q99680 433 aa13.89□□□□□ -0.19
IKBKE-201ENST00000578328 PDFQ9HBH1 243 aa13.89□□□□□ -0.19
IKBKE-201ENST00000578328 NSMCE4AQ9NXX6 385 aa13.89□□□□□ -0.19
IKBKE-201ENST00000578328 KCNK4Q9NYG8 393 aa13.89□□□□□ -0.19
IKBKE-201ENST00000578328 A0A088AWK7 358 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 HEATR9A2RTY3 570 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 AURKAO14965 403 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 TEX28O15482 410 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 CSPG5O95196 566 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 IL1BP01584 269 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 MPOP05164 745 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 CD1EP15812 388 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 PAMP19021 973 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 RFC2P35250 354 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 ZNF460Q14592 562 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 RABGAP1LQ5R372 815 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 ADGRF1Q5T601 910 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 ARMC3Q5W041 872 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 DDX53Q86TM3 631 aaKnown RBP13.88□□□□□ -0.19
IKBKE-201ENST00000578328 RNF135Q8IUD6 432 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 CRLF3Q8IUI8 442 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 EGFL6Q8IUX8 553 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 SLC41A1Q8IVJ1 513 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 SPNS2Q8IVW8 549 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 MFSD6LQ8IWD5 586 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 CNTN4Q8IWV2 1026 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 PLD4Q96BZ4 506 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 EXOC2Q96KP1 924 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 GBP5Q96PP8 586 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 MAGEH1Q9H213 219 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 C11orf49Q9H6J7 331 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 MRM3Q9HC36 420 aaKnown RBP13.88□□□□□ -0.19
IKBKE-201ENST00000578328 MRPL17Q9NRX2 175 aaKnown RBP13.88□□□□□ -0.19
IKBKE-201ENST00000578328 THAP1Q9NVV9 213 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 NDE1Q9NXR1 346 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 HSFX1Q9UBD0 423 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 TAGLN3Q9UI15 199 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 KCTD3Q9Y597 815 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 LTBP2Q14767 1821 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 SPECC1L-ADORA2AF8WAN1 911 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 BUD23O43709 281 aaKnown RBP13.88□□□□□ -0.19
IKBKE-201ENST00000578328 PIRTP0C851 137 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 MBL2P11226 248 aaPredicted RBP13.88□□□□□ -0.19
IKBKE-201ENST00000578328 CPA3P15088 417 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 LAG3P18627 525 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 CPOXP36551 454 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 RPS6KA3P51812 740 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 GALNT3Q14435 633 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 CNPY1Q3B7I2 92 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 SFT2D3Q587I9 215 aa13.88□□□□□ -0.19
IKBKE-201ENST00000578328 NEPROQ6NW34 567 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms