RNA–Protein interactions for RNA: ENST00000577572.5

SS18-206, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 510 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-206ENST00000577572 QPCTQ16769 361 aa15.37■□□□□ 0.05
SS18-206ENST00000577572 ZNF805Q5CZA5 627 aa15.37■□□□□ 0.05
SS18-206ENST00000577572 CERCAMQ5T4B2 595 aa15.37■□□□□ 0.05
SS18-206ENST00000577572 C9orf64Q5T6V5 341 aa15.37■□□□□ 0.05
SS18-206ENST00000577572 FAM46CQ5VWP2 391 aa15.37■□□□□ 0.05
SS18-206ENST00000577572 UNC5AQ6ZN44 842 aa15.37■□□□□ 0.05
SS18-206ENST00000577572 CAMK1DQ8IU85 385 aa15.37■□□□□ 0.05
SS18-206ENST00000577572 RNF135Q8IUD6 432 aa15.37■□□□□ 0.05
SS18-206ENST00000577572 ANKMY2Q8IV38 441 aa15.37■□□□□ 0.05
SS18-206ENST00000577572 IGDCC3Q8IVU1 814 aa15.37■□□□□ 0.05
SS18-206ENST00000577572 UBALD2Q8IYN6 164 aa15.37■□□□□ 0.05
SS18-206ENST00000577572 SLC25A41Q8N5S1 370 aa15.37■□□□□ 0.05
SS18-206ENST00000577572 SCG3Q8WXD2 468 aaKnown RBP15.37■□□□□ 0.05
SS18-206ENST00000577572 VOPP1Q96AW1 172 aa15.37■□□□□ 0.05
SS18-206ENST00000577572 SCRN2Q96FV2 425 aa15.37■□□□□ 0.05
SS18-206ENST00000577572 SHDQ96IW2 340 aa15.37■□□□□ 0.05
SS18-206ENST00000577572 NSMCE3Q96MG7 304 aa15.37■□□□□ 0.05
SS18-206ENST00000577572 RUFY1Q96T51 708 aa15.37■□□□□ 0.05
SS18-206ENST00000577572 CYTH2Q99418 400 aa15.37■□□□□ 0.05
SS18-206ENST00000577572 GABRG3Q99928 467 aa15.37■□□□□ 0.05
SS18-206ENST00000577572 ACSS3Q9H6R3 686 aa15.37■□□□□ 0.05
SS18-206ENST00000577572 VPS37BQ9H9H4 285 aa15.37■□□□□ 0.05
SS18-206ENST00000577572 HEBP1Q9NRV9 189 aa15.37■□□□□ 0.05
SS18-206ENST00000577572 WNT16Q9UBV4 365 aa15.37■□□□□ 0.05
SS18-206ENST00000577572 MRPS17Q9Y2R5 130 aaKnown RBP15.37■□□□□ 0.05
SS18-206ENST00000577572 PCDHB9Q9Y5E1 797 aa15.37■□□□□ 0.05
SS18-206ENST00000577572 STON1Q9Y6Q2 735 aa15.37■□□□□ 0.05
SS18-206ENST00000577572 WASF2Q9Y6W5 498 aa15.37■□□□□ 0.05
SS18-206ENST00000577572 A0A0J9YYE9 177 aa15.36■□□□□ 0.05
SS18-206ENST00000577572 C2orf81A6NN90 581 aa15.36■□□□□ 0.05
SS18-206ENST00000577572 ACSL3O95573 720 aa15.36■□□□□ 0.05
SS18-206ENST00000577572 TRBC1P01850 177 aa15.36■□□□□ 0.05
SS18-206ENST00000577572 NTSR1P30989 418 aa15.36■□□□□ 0.05
SS18-206ENST00000577572 IL12RB1P42701 662 aa15.36■□□□□ 0.05
SS18-206ENST00000577572 GPX6P59796 221 aa15.36■□□□□ 0.05
SS18-206ENST00000577572 TFF2Q03403 129 aa15.36■□□□□ 0.05
SS18-206ENST00000577572 ACVR1Q04771 509 aa15.36■□□□□ 0.05
SS18-206ENST00000577572 IFFO1Q0D2I5 559 aa15.36■□□□□ 0.05
SS18-206ENST00000577572 CCDC15Q0P6D6 951 aa15.36■□□□□ 0.05
SS18-206ENST00000577572 CAMK2GQ13555 558 aaPredicted RBP15.36■□□□□ 0.05
SS18-206ENST00000577572 CRYMQ14894 314 aa15.36■□□□□ 0.05
SS18-206ENST00000577572 MLF2Q15773 248 aaPredicted RBP15.36■□□□□ 0.05
SS18-206ENST00000577572 SKIDA1Q1XH10 827 aa15.36■□□□□ 0.05
SS18-206ENST00000577572 ANKRD20A4Q4UJ75 823 aa15.36■□□□□ 0.05
SS18-206ENST00000577572 FSTL4Q6MZW2 842 aa15.36■□□□□ 0.05
SS18-206ENST00000577572 TXNDC11Q6PKC3 985 aa15.36■□□□□ 0.05
SS18-206ENST00000577572 ZNF852Q6ZMS4 543 aa15.36■□□□□ 0.05
SS18-206ENST00000577572 USP45Q70EL2 814 aa15.36■□□□□ 0.05
SS18-206ENST00000577572 TDRPQ86YL5 185 aa15.36■□□□□ 0.05
SS18-206ENST00000577572 LMNTD2Q8IXW0 634 aa15.36■□□□□ 0.05
SS18-206ENST00000577572 CHPFQ8IZ52 775 aa15.36■□□□□ 0.05
SS18-206ENST00000577572 MPP5Q8N3R9 675 aa15.36■□□□□ 0.05
SS18-206ENST00000577572 RIBC1Q8N443 379 aaPredicted RBP15.36■□□□□ 0.05
SS18-206ENST00000577572 ZNF513Q8N8E2 541 aaPredicted RBP15.36■□□□□ 0.05
SS18-206ENST00000577572 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.36■□□□□ 0.05
SS18-206ENST00000577572 LPCAT1Q8NF37 534 aa15.36■□□□□ 0.05
SS18-206ENST00000577572 STYXQ8WUJ0 223 aa15.36■□□□□ 0.05
SS18-206ENST00000577572 FAM3CQ92520 227 aa15.36■□□□□ 0.05
SS18-206ENST00000577572 CDKL2Q92772 493 aa15.36■□□□□ 0.05
SS18-206ENST00000577572 PPP1R16AQ96I34 528 aa15.36■□□□□ 0.05
SS18-206ENST00000577572 MCCC1Q96RQ3 725 aaPredicted RBP15.36■□□□□ 0.05
SS18-206ENST00000577572 NELL2Q99435 816 aa15.36■□□□□ 0.05
SS18-206ENST00000577572 ZDHHC6Q9H6R6 413 aa15.36■□□□□ 0.05
SS18-206ENST00000577572 FBRSL1Q9HCM7 1045 aaKnown RBP15.36■□□□□ 0.05
SS18-206ENST00000577572 SLC24A2Q9UI40 661 aa15.36■□□□□ 0.05
SS18-206ENST00000577572 PPM1HQ9ULR3 514 aa15.36■□□□□ 0.05
SS18-206ENST00000577572 PLAAQ9Y263 795 aa15.36■□□□□ 0.05
SS18-206ENST00000577572 NFS1Q9Y697 457 aa15.36■□□□□ 0.05
SS18-206ENST00000577572 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.36■□□□□ 0.05
SS18-206ENST00000577572 RPS6KL1Q9Y6S9 549 aa15.36■□□□□ 0.05
SS18-206ENST00000577572 COL4A2P08572 1712 aa15.36■□□□□ 0.05
SS18-206ENST00000577572 TCRBV9S1A1TA0A576 114 aa15.35■□□□□ 0.05
SS18-206ENST00000577572 CAPN8A6NHC0 703 aa15.35■□□□□ 0.05
SS18-206ENST00000577572 C1QTNF3-AMACRE9PGA6 284 aa15.35■□□□□ 0.05
SS18-206ENST00000577572 OPA1O60313 960 aa15.35■□□□□ 0.05
SS18-206ENST00000577572 RNASEH1O60930 286 aaKnown RBP15.35■□□□□ 0.05
SS18-206ENST00000577572 PDHA1P08559 390 aa15.35■□□□□ 0.05
SS18-206ENST00000577572 CHRM1P11229 460 aaPredicted RBP15.35■□□□□ 0.05
SS18-206ENST00000577572 TPH1P17752 444 aa15.35■□□□□ 0.05
SS18-206ENST00000577572 SSTR1P30872 391 aa15.35■□□□□ 0.05
SS18-206ENST00000577572 PTPN5P54829 565 aa15.35■□□□□ 0.05
SS18-206ENST00000577572 OLIG2Q13516 323 aa15.35■□□□□ 0.05
SS18-206ENST00000577572 GALNT3Q14435 633 aa15.35■□□□□ 0.05
SS18-206ENST00000577572 STARD3Q14849 445 aa15.35■□□□□ 0.05
SS18-206ENST00000577572 POU6F1Q14863 301 aa15.35■□□□□ 0.05
SS18-206ENST00000577572 TSTD2Q5T7W7 516 aa15.35■□□□□ 0.05
SS18-206ENST00000577572 ZDHHC20Q5W0Z9 365 aa15.35■□□□□ 0.05
SS18-206ENST00000577572 EGFLAMQ63HQ2 1017 aa15.35■□□□□ 0.05
SS18-206ENST00000577572 NAIF1Q69YI7 327 aaPredicted RBP15.35■□□□□ 0.05
SS18-206ENST00000577572 PDPK2PQ6A1A2 396 aa15.35■□□□□ 0.05
SS18-206ENST00000577572 KIAA0930Q6ICG6 404 aaPredicted RBP15.35■□□□□ 0.05
SS18-206ENST00000577572 KDELC2Q7Z4H8 507 aa15.35■□□□□ 0.05
SS18-206ENST00000577572 MTERF4Q7Z6M4 381 aaKnown RBP15.35■□□□□ 0.05
SS18-206ENST00000577572 CHST14Q8NCH0 376 aa15.35■□□□□ 0.05
SS18-206ENST00000577572 PDCD6IPQ8WUM4 868 aaKnown RBP15.35■□□□□ 0.05
SS18-206ENST00000577572 SGSM3Q96HU1 749 aa15.35■□□□□ 0.05
SS18-206ENST00000577572 CHRAC1Q9NRG0 131 aa15.35■□□□□ 0.05
SS18-206ENST00000577572 TREX1Q9NSU2 369 aa15.35■□□□□ 0.05
SS18-206ENST00000577572 NSMCE4AQ9NXX6 385 aa15.35■□□□□ 0.05
SS18-206ENST00000577572 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms