RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.2□□□□□ -0.78
NPLOC4-220ENST00000576940 FAM72CH0Y354 149 aa10.2□□□□□ -0.78
NPLOC4-220ENST00000576940 GOLGA8SH3BPF8 625 aa10.2□□□□□ -0.78
NPLOC4-220ENST00000576940 STMND1H3BQB6 276 aa10.2□□□□□ -0.78
NPLOC4-220ENST00000576940 BUB1O43683 1085 aa10.2□□□□□ -0.78
NPLOC4-220ENST00000576940 GNA14O95837 355 aa10.2□□□□□ -0.78
NPLOC4-220ENST00000576940 PRKCGP05129 697 aa10.2□□□□□ -0.78
NPLOC4-220ENST00000576940 PCCBP05166 539 aa10.2□□□□□ -0.78
NPLOC4-220ENST00000576940 FGF3P11487 239 aaPredicted RBP10.2□□□□□ -0.78
NPLOC4-220ENST00000576940 LIFP15018 202 aa10.2□□□□□ -0.78
NPLOC4-220ENST00000576940 PNLIPP16233 465 aa10.2□□□□□ -0.78
NPLOC4-220ENST00000576940 CD82P27701 267 aa10.2□□□□□ -0.78
NPLOC4-220ENST00000576940 CASRP41180 1078 aa10.2□□□□□ -0.78
NPLOC4-220ENST00000576940 MARSP56192 900 aaKnown RBP10.2□□□□□ -0.78
NPLOC4-220ENST00000576940 OR1D5P58170 312 aa10.2□□□□□ -0.78
NPLOC4-220ENST00000576940 HLTFQ14527 1009 aaKnown RBP eCLIP10.2□□□□□ -0.78
NPLOC4-220ENST00000576940 NCAPHQ15003 741 aa10.2□□□□□ -0.78
NPLOC4-220ENST00000576940 LRRK1Q38SD2 2015 aa10.2□□□□□ -0.78
NPLOC4-220ENST00000576940 C14orf28Q4W4Y0 310 aa10.2□□□□□ -0.78
NPLOC4-220ENST00000576940 SDK2Q58EX2 2172 aa10.2□□□□□ -0.78
NPLOC4-220ENST00000576940 ACBD5Q5T8D3 534 aaPredicted RBP10.2□□□□□ -0.78
NPLOC4-220ENST00000576940 FAM102AQ5T9C2 384 aaPredicted RBP10.2□□□□□ -0.78
NPLOC4-220ENST00000576940 FAM72AQ5TYM5 149 aa10.2□□□□□ -0.78
NPLOC4-220ENST00000576940 FAM72DQ6L9T8 149 aa10.2□□□□□ -0.78
NPLOC4-220ENST00000576940 FOXR2Q6PJQ5 311 aa10.2□□□□□ -0.78
NPLOC4-220ENST00000576940 BNIPLQ7Z465 357 aa10.2□□□□□ -0.78
NPLOC4-220ENST00000576940 PIM3Q86V86 326 aa10.2□□□□□ -0.78
NPLOC4-220ENST00000576940 NLRP14Q86W24 1093 aa10.2□□□□□ -0.78
NPLOC4-220ENST00000576940 FAM72BQ86X60 149 aa10.2□□□□□ -0.78
NPLOC4-220ENST00000576940 PLA2G15Q8NCC3 412 aa10.2□□□□□ -0.78
NPLOC4-220ENST00000576940 OR1E3Q8WZA6 343 aa10.2□□□□□ -0.78
NPLOC4-220ENST00000576940 C18orf8Q96DM3 657 aa10.2□□□□□ -0.78
NPLOC4-220ENST00000576940 WDR92Q96MX6 357 aa10.2□□□□□ -0.78
NPLOC4-220ENST00000576940 TTYH3Q9C0H2 523 aa10.2□□□□□ -0.78
NPLOC4-220ENST00000576940 TMEM168Q9H0V1 697 aa10.2□□□□□ -0.78
NPLOC4-220ENST00000576940 APEX2Q9UBZ4 518 aa10.2□□□□□ -0.78
NPLOC4-220ENST00000576940 OR12D3Q9UGF7 316 aa10.2□□□□□ -0.78
NPLOC4-220ENST00000576940 USP9YO00507 2555 aaPredicted RBP10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 BICDL2A1A5D9 508 aa10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 BLACEA4D250 179 aa10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 NKX2-8O15522 239 aa10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 KDELR3O43731 214 aa10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 TMCC1O94876 653 aa10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 PIGNO95427 931 aa10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 CPNE6O95741 557 aa10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 XPAP23025 273 aaPredicted RBP10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 MPSTP25325 297 aa10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 PON1P27169 355 aa10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 ALDH4A1P30038 563 aa10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 UGT1A3P35503 534 aa10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 CCR10P46092 362 aa10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 GABRB2P47870 512 aa10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 LIG3P49916 1009 aa10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 ATP11AP98196 1134 aa10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 RAD51Q06609 339 aa10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 MAP9Q49MG5 647 aa10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 EFHC2Q5JST6 749 aa10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 PHLDB2Q86SQ0 1253 aa10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 ZNF354CQ86Y25 554 aa10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 XYLT1Q86Y38 959 aa10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 FAM26EQ8N5C1 309 aa10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 IL22RA1Q8N6P7 574 aa10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 EMC1Q8N766 993 aa10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 HMCESQ96FZ2 354 aa10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 EXOC2Q96KP1 924 aa10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 FAM81BQ96LP2 452 aa10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 NUDT22Q9BRQ3 303 aa10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 KLC2Q9H0B6 622 aa10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 MAGEH1Q9H213 219 aa10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 PDCL3Q9H2J4 239 aa10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 SPATS2LQ9NUQ6 558 aaKnown RBP10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 DKK3Q9UBP4 350 aa10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 TMEM59LQ9UK28 342 aa10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 DNAJC12Q9UKB3 198 aa10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 HPCAL4Q9UM19 191 aa10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 PLAAQ9Y263 795 aa10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 DGKBQ9Y6T7 804 aa10.19□□□□□ -0.78
NPLOC4-220ENST00000576940 LRP4O75096 1905 aa10.18□□□□□ -0.78
NPLOC4-220ENST00000576940 IGHV5-10-1A0A0J9YXX1 117 aa10.18□□□□□ -0.78
NPLOC4-220ENST00000576940 CXorf51AA0A1B0GTR3 108 aa10.18□□□□□ -0.78
NPLOC4-220ENST00000576940 BIN1O00499 593 aa10.18□□□□□ -0.78
NPLOC4-220ENST00000576940 NUDT21O43809 227 aaKnown RBP10.18□□□□□ -0.78
NPLOC4-220ENST00000576940 RAMP2O60895 175 aa10.18□□□□□ -0.78
NPLOC4-220ENST00000576940 LRIG2O94898 1065 aa10.18□□□□□ -0.78
NPLOC4-220ENST00000576940 RHOQP17081 205 aa10.18□□□□□ -0.78
NPLOC4-220ENST00000576940 ADRA1BP35368 520 aa10.18□□□□□ -0.78
NPLOC4-220ENST00000576940 ETFBP38117 255 aa10.18□□□□□ -0.78
NPLOC4-220ENST00000576940 PPP1R2P41236 205 aa10.18□□□□□ -0.78
NPLOC4-220ENST00000576940 ATP1A2P50993 1020 aa10.18□□□□□ -0.78
NPLOC4-220ENST00000576940 MAZP56270 477 aaKnown RBP10.18□□□□□ -0.78
NPLOC4-220ENST00000576940 GEMIN4P57678 1058 aaKnown RBP10.18□□□□□ -0.78
NPLOC4-220ENST00000576940 RHOAP61586 193 aa10.18□□□□□ -0.78
NPLOC4-220ENST00000576940 SERINC3Q13530 473 aa10.18□□□□□ -0.78
NPLOC4-220ENST00000576940 CYTH1Q15438 398 aa10.18□□□□□ -0.78
NPLOC4-220ENST00000576940 UGP2Q16851 508 aa10.18□□□□□ -0.78
NPLOC4-220ENST00000576940 CDO1Q16878 200 aa10.18□□□□□ -0.78
NPLOC4-220ENST00000576940 C15orf59Q2T9L4 293 aaPredicted RBP10.18□□□□□ -0.78
NPLOC4-220ENST00000576940 MANEALQ5VSG8 457 aa10.18□□□□□ -0.78
NPLOC4-220ENST00000576940 NKAIN2Q5VXU1 208 aa10.18□□□□□ -0.78
NPLOC4-220ENST00000576940 SPECC1LQ69YQ0 1117 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms