RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 RIOX2Q8IUF8 465 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 OR7A2PQ8NGA2 310 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 PDZD7Q9H5P4 517 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 VPS28Q9UK41 221 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 SMIM28A0A1B0GU29 152 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 MDM4O15151 490 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 ARHGEF9O43307 516 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 FGFR1P11362 822 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 HK2P52789 917 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 MADCAM1Q13477 382 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 ADGRE1Q14246 886 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 SPDYE7PQ495Y7 208 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 CLYBLQ8N0X4 340 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 WDTC1Q8N5D0 677 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 SIGLEC10Q96LC7 697 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 TBATAQ96M53 351 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 TMCO1Q9UM00 188 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 H3BMM5 538 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 SLC18A1P54219 525 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 XIAPP98170 497 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 MAPRE1Q15691 268 aaKnown RBP17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 RSBN1Q5VWQ0 802 aaPredicted RBP17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 PKN3Q6P5Z2 889 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 KLHDC10Q6PID8 442 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 SLC26A9Q7LBE3 791 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 OR56A4Q8NGH8 313 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 TRPM4Q8TD43 1214 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 VPS33AQ96AX1 596 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 SCUBE2Q9NQ36 999 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 A0A087X1B8 175 aa17.97■□□□□ 0.47
ATPAF1-214ENST00000576409 IPO13O94829 963 aaKnown RBP17.97■□□□□ 0.47
ATPAF1-214ENST00000576409 AP2A1O95782 977 aa17.97■□□□□ 0.47
ATPAF1-214ENST00000576409 DBTP11182 482 aaKnown RBP17.97■□□□□ 0.47
ATPAF1-214ENST00000576409 PTPN3P26045 913 aa17.97■□□□□ 0.47
ATPAF1-214ENST00000576409 CDH18Q13634 790 aa17.97■□□□□ 0.47
ATPAF1-214ENST00000576409 C9orf57Q5W0N0 161 aa17.97■□□□□ 0.47
ATPAF1-214ENST00000576409 CARNMT1Q8N4J0 409 aa17.97■□□□□ 0.47
ATPAF1-214ENST00000576409 STAG3L4Q8TBR4 150 aa17.97■□□□□ 0.47
ATPAF1-214ENST00000576409 BTBD9Q96Q07 612 aa17.97■□□□□ 0.47
ATPAF1-214ENST00000576409 ADAMTS6Q9UKP5 1117 aa17.97■□□□□ 0.47
ATPAF1-214ENST00000576409 ABT1Q9ULW3 272 aaKnown RBP17.97■□□□□ 0.47
ATPAF1-214ENST00000576409 SPATA31A6Q5VVP1 1343 aa17.97■□□□□ 0.47
ATPAF1-214ENST00000576409 KPNA4O00629 521 aaPredicted RBP17.97■□□□□ 0.47
ATPAF1-214ENST00000576409 MLNP12872 115 aa17.97■□□□□ 0.47
ATPAF1-214ENST00000576409 AP5B1Q2VPB7 878 aa17.97■□□□□ 0.47
ATPAF1-214ENST00000576409 EGFLAMQ63HQ2 1017 aa17.97■□□□□ 0.47
ATPAF1-214ENST00000576409 TMEM26Q6ZUK4 368 aa17.97■□□□□ 0.47
ATPAF1-214ENST00000576409 C16orf59Q7L2K0 433 aa17.97■□□□□ 0.47
ATPAF1-214ENST00000576409 CHST15Q7LFX5 561 aaPredicted RBP17.97■□□□□ 0.47
ATPAF1-214ENST00000576409 STRADAQ7RTN6 431 aa17.97■□□□□ 0.47
ATPAF1-214ENST00000576409 ACTRT2Q8TDY3 377 aa17.97■□□□□ 0.47
ATPAF1-214ENST00000576409 DUSP16Q9BY84 665 aa17.97■□□□□ 0.47
ATPAF1-214ENST00000576409 TRIM8Q9BZR9 551 aa17.97■□□□□ 0.47
ATPAF1-214ENST00000576409 RAD21L1Q9H4I0 556 aa17.97■□□□□ 0.47
ATPAF1-214ENST00000576409 ATP13A1Q9HD20 1204 aa17.97■□□□□ 0.47
ATPAF1-214ENST00000576409 GIMAP2Q9UG22 337 aa17.97■□□□□ 0.47
ATPAF1-214ENST00000576409 ZDHHC2Q9UIJ5 367 aa17.97■□□□□ 0.47
ATPAF1-214ENST00000576409 SNX8Q9Y5X2 465 aa17.97■□□□□ 0.47
ATPAF1-214ENST00000576409 GNG14A0A1W2PPG7 69 aa17.97■□□□□ 0.47
ATPAF1-214ENST00000576409 YJEFN3A6XGL0 299 aa17.97■□□□□ 0.47
ATPAF1-214ENST00000576409 GRIK3Q13003 919 aa17.97■□□□□ 0.47
ATPAF1-214ENST00000576409 SIM2Q14190 667 aaPredicted RBP17.97■□□□□ 0.47
ATPAF1-214ENST00000576409 ANKRD23Q86SG2 305 aa17.97■□□□□ 0.47
ATPAF1-214ENST00000576409 LGI2Q8N0V4 545 aa17.97■□□□□ 0.47
ATPAF1-214ENST00000576409 TRAFD1O14545 582 aaPredicted RBP17.96■□□□□ 0.47
ATPAF1-214ENST00000576409 LRATO95237 230 aa17.96■□□□□ 0.47
ATPAF1-214ENST00000576409 GSNP06396 782 aa17.96■□□□□ 0.47
ATPAF1-214ENST00000576409 RAP1GDS1P52306 607 aa17.96■□□□□ 0.47
ATPAF1-214ENST00000576409 OGFOD2Q6N063 350 aa17.96■□□□□ 0.47
ATPAF1-214ENST00000576409 GLOD4Q9HC38 313 aa17.96■□□□□ 0.47
ATPAF1-214ENST00000576409 TTC24A2A3L6 582 aaPredicted RBP17.96■□□□□ 0.47
ATPAF1-214ENST00000576409 RHOCP08134 193 aa17.96■□□□□ 0.47
ATPAF1-214ENST00000576409 MTHFD1P11586 935 aaKnown RBP17.96■□□□□ 0.47
ATPAF1-214ENST00000576409 YWHAQP27348 245 aa17.96■□□□□ 0.47
ATPAF1-214ENST00000576409 RPL38P63173 70 aaKnown RBP17.96■□□□□ 0.47
ATPAF1-214ENST00000576409 NOMO2Q5JPE7 1267 aa17.96■□□□□ 0.47
ATPAF1-214ENST00000576409 ZNF280DQ6N043 979 aa17.96■□□□□ 0.47
ATPAF1-214ENST00000576409 PRMT9Q6P2P2 845 aa17.96■□□□□ 0.47
ATPAF1-214ENST00000576409 CNSTQ6PJW8 725 aa17.96■□□□□ 0.47
ATPAF1-214ENST00000576409 NIFKQ9BYG3 293 aaKnown RBP17.96■□□□□ 0.47
ATPAF1-214ENST00000576409 CYTH4Q9UIA0 394 aa17.96■□□□□ 0.47
ATPAF1-214ENST00000576409 E7ENX8 843 aa17.96■□□□□ 0.47
ATPAF1-214ENST00000576409 PRRG1O14668 218 aa17.96■□□□□ 0.47
ATPAF1-214ENST00000576409 SIX3O95343 332 aaPredicted RBP17.96■□□□□ 0.47
ATPAF1-214ENST00000576409 CST1P01037 141 aa17.96■□□□□ 0.47
ATPAF1-214ENST00000576409 OR4Q2P0C623 313 aa17.96■□□□□ 0.47
ATPAF1-214ENST00000576409 RHOAP61586 193 aa17.96■□□□□ 0.47
ATPAF1-214ENST00000576409 PRKG2Q13237 762 aa17.96■□□□□ 0.47
ATPAF1-214ENST00000576409 CPSF6Q16630 551 aaKnown RBP eCLIP17.96■□□□□ 0.478e-9■■■■□ 22.7
ATPAF1-214ENST00000576409 PAGE2BQ5JRK9 111 aa17.96■□□□□ 0.47
ATPAF1-214ENST00000576409 XKR5Q6UX68 686 aa17.96■□□□□ 0.47
ATPAF1-214ENST00000576409 GALNT5Q7Z7M9 940 aa17.96■□□□□ 0.47
ATPAF1-214ENST00000576409 STX19Q8N4C7 294 aa17.96■□□□□ 0.47
ATPAF1-214ENST00000576409 PNPLA1Q8N8W4 532 aa17.96■□□□□ 0.47
ATPAF1-214ENST00000576409 VPS37AQ8NEZ2 397 aa17.96■□□□□ 0.47
ATPAF1-214ENST00000576409 CAPSLQ8WWF8 208 aa17.96■□□□□ 0.47
ATPAF1-214ENST00000576409 TM6SF2Q9BZW4 377 aa17.96■□□□□ 0.47
ATPAF1-214ENST00000576409 CATSPERZQ9NTU4 200 aa17.96■□□□□ 0.47
ATPAF1-214ENST00000576409 OR51F1A6NGY5 319 aa17.95■□□□□ 0.46
ATPAF1-214ENST00000576409 J3QRK9 145 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms