RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 NRG1Q02297 640 aaPredicted RBP9.08□□□□□ -0.96
SMG6-218ENST00000575454 C1QBPQ07021 282 aaKnown RBP9.08□□□□□ -0.96
SMG6-218ENST00000575454 MTM1Q13496 603 aa9.08□□□□□ -0.96
SMG6-218ENST00000575454 TRA2AQ13595 282 aaKnown RBP eCLIP9.08□□□□□ -0.96
SMG6-218ENST00000575454 PEX6Q13608 980 aa9.08□□□□□ -0.96
SMG6-218ENST00000575454 HLTFQ14527 1009 aaKnown RBP eCLIP9.08□□□□□ -0.96
SMG6-218ENST00000575454 INPP5AQ14642 412 aa9.08□□□□□ -0.96
SMG6-218ENST00000575454 AGERQ15109 404 aa9.08□□□□□ -0.96
SMG6-218ENST00000575454 TSR1Q2NL82 804 aaKnown RBP9.08□□□□□ -0.96
SMG6-218ENST00000575454 MAP9Q49MG5 647 aa9.08□□□□□ -0.96
SMG6-218ENST00000575454 CFAP58Q5T655 872 aa9.08□□□□□ -0.96
SMG6-218ENST00000575454 FAM102AQ5T9C2 384 aaPredicted RBP9.08□□□□□ -0.96
SMG6-218ENST00000575454 RWDD4Q6NW29 188 aaKnown RBP9.08□□□□□ -0.96
SMG6-218ENST00000575454 ARCQ7LC44 396 aa9.08□□□□□ -0.96
SMG6-218ENST00000575454 PTRH1Q86Y79 214 aaKnown RBP9.08□□□□□ -0.96
SMG6-218ENST00000575454 IL22RA1Q8N6P7 574 aa9.08□□□□□ -0.96
SMG6-218ENST00000575454 C18orf8Q96DM3 657 aa9.08□□□□□ -0.96
SMG6-218ENST00000575454 EFHD1Q9BUP0 239 aa9.08□□□□□ -0.96
SMG6-218ENST00000575454 WRAP53Q9BUR4 548 aaKnown RBP9.08□□□□□ -0.96
SMG6-218ENST00000575454 DPEP2Q9H4A9 486 aa9.08□□□□□ -0.96
SMG6-218ENST00000575454 OR12D3Q9UGF7 316 aa9.08□□□□□ -0.96
SMG6-218ENST00000575454 MAN2B2Q9Y2E5 1009 aa9.08□□□□□ -0.96
SMG6-218ENST00000575454 NBASA2RRP1 2371 aa9.07□□□□□ -0.96
SMG6-218ENST00000575454 GTPBP10A4D1E9 387 aaKnown RBP9.07□□□□□ -0.96
SMG6-218ENST00000575454 CLEC18AA5D8T8 446 aa9.07□□□□□ -0.96
SMG6-218ENST00000575454 RHPN2P1A8MT19 583 aa9.07□□□□□ -0.96
SMG6-218ENST00000575454 PPP1R3GB7ZBB8 358 aa9.07□□□□□ -0.96
SMG6-218ENST00000575454 LSM8O95777 96 aaKnown RBP9.07□□□□□ -0.96
SMG6-218ENST00000575454 CD44P16070 742 aaKnown RBP9.07□□□□□ -0.96
SMG6-218ENST00000575454 TFE3P19532 575 aaPredicted RBP9.07□□□□□ -0.96
SMG6-218ENST00000575454 WT1P19544 449 aaPredicted RBP9.07□□□□□ -0.96
SMG6-218ENST00000575454 ETV5P41161 510 aa9.07□□□□□ -0.96
SMG6-218ENST00000575454 KIAA1024LP59773 190 aa9.07□□□□□ -0.96
SMG6-218ENST00000575454 RHOAP61586 193 aa9.07□□□□□ -0.96
SMG6-218ENST00000575454 BIRC2Q13490 618 aa9.07□□□□□ -0.96
SMG6-218ENST00000575454 EXOC3L4Q17RC7 722 aa9.07□□□□□ -0.96
SMG6-218ENST00000575454 SKIDA1Q1XH10 827 aa9.07□□□□□ -0.96
SMG6-218ENST00000575454 ARTNQ5T4W7 220 aa9.07□□□□□ -0.96
SMG6-218ENST00000575454 ATXN7L2Q5T6C5 722 aaPredicted RBP9.07□□□□□ -0.96
SMG6-218ENST00000575454 GJB7Q6PEY0 223 aa9.07□□□□□ -0.96
SMG6-218ENST00000575454 BRAT1Q6PJG6 821 aa9.07□□□□□ -0.96
SMG6-218ENST00000575454 CLEC18BQ6UXF7 455 aa9.07□□□□□ -0.96
SMG6-218ENST00000575454 NLRP14Q86W24 1093 aa9.07□□□□□ -0.96
SMG6-218ENST00000575454 ATCAYQ86WG3 371 aa9.07□□□□□ -0.96
SMG6-218ENST00000575454 FAM131BQ86XD5 332 aa9.07□□□□□ -0.96
SMG6-218ENST00000575454 CLEC18CQ8NCF0 446 aa9.07□□□□□ -0.96
SMG6-218ENST00000575454 AGBL5Q8NDL9 886 aa9.07□□□□□ -0.96
SMG6-218ENST00000575454 OR56A4Q8NGH8 313 aa9.07□□□□□ -0.96
SMG6-218ENST00000575454 C9orf43Q8TAL5 461 aaPredicted RBP9.07□□□□□ -0.96
SMG6-218ENST00000575454 NKD1Q969G9 470 aa9.07□□□□□ -0.96
SMG6-218ENST00000575454 HMCESQ96FZ2 354 aa9.07□□□□□ -0.96
SMG6-218ENST00000575454 ZNF641Q96N77 438 aaPredicted RBP9.07□□□□□ -0.96
SMG6-218ENST00000575454 PSMG3-AS1Q96PY0 264 aa9.07□□□□□ -0.96
SMG6-218ENST00000575454 DPYSL5Q9BPU6 564 aa9.07□□□□□ -0.96
SMG6-218ENST00000575454 NCAPGQ9BPX3 1015 aa9.07□□□□□ -0.96
SMG6-218ENST00000575454 CRACR2AQ9BSW2 395 aa9.07□□□□□ -0.96
SMG6-218ENST00000575454 DDA1Q9BW61 102 aa9.07□□□□□ -0.96
SMG6-218ENST00000575454 SEMA6CQ9H3T2 930 aa9.07□□□□□ -0.96
SMG6-218ENST00000575454 TMEM248Q9NWD8 314 aa9.07□□□□□ -0.96
SMG6-218ENST00000575454 ZDHHC9Q9Y397 364 aa9.07□□□□□ -0.96
SMG6-218ENST00000575454 OR1A2Q9Y585 309 aa9.07□□□□□ -0.96
SMG6-218ENST00000575454 ACTL7AQ9Y615 435 aa9.07□□□□□ -0.96
SMG6-218ENST00000575454 CREBBPQ92793 2442 aa9.07□□□□□ -0.96
SMG6-218ENST00000575454 B4DGG1 531 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 TMCC1O94876 653 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 PCCBP05166 539 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 PRKCSHP14314 528 aaPredicted RBP9.06□□□□□ -0.96
SMG6-218ENST00000575454 SLC9A1P19634 815 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 CDH5P33151 784 aaPredicted RBP9.06□□□□□ -0.96
SMG6-218ENST00000575454 CSTF2P33240 577 aaKnown RBP eCLIP9.06□□□□□ -0.96
SMG6-218ENST00000575454 MAN1A1P33908 653 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 ADRA1BP35368 520 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 STAT1P42224 750 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 GPR3P46089 330 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 LIG3P49916 1009 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 RAB15P59190 212 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 B4GALNT1Q00973 533 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 MC1RQ01726 317 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 PAK1Q13153 545 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 SEPT6Q14141 434 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 C16orf72Q14CZ0 275 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 TCEA2Q15560 299 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 IGFBP7Q16270 282 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 UGP2Q16851 508 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 AMZ1Q400G9 498 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 EFHC2Q5JST6 749 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 LRRC73Q5JTD7 316 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 SPECC1LQ69YQ0 1117 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 BNIPLQ7Z465 357 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 SLC47A2Q86VL8 602 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 ZNF354CQ86Y25 554 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 XYLT1Q86Y38 959 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 CACNA2D3Q8IZS8 1091 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 JPH3Q8WXH2 748 aaPredicted RBP9.06□□□□□ -0.96
SMG6-218ENST00000575454 KIAA1143Q96AT1 154 aaPredicted RBP9.06□□□□□ -0.96
SMG6-218ENST00000575454 VOPP1Q96AW1 172 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 TBC1D31Q96DN5 1066 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 PDXPQ96GD0 296 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 SUV39H2Q9H5I1 410 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 LRRC4CQ9HCJ2 640 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms