RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 PIM3Q86V86 326 aa23.79■■□□□ 1.4
NPLOC4-217ENST00000574897 CALML6Q8TD86 181 aa23.79■■□□□ 1.4
NPLOC4-217ENST00000574897 AUTS2Q8WXX7 1259 aa23.79■■□□□ 1.4
NPLOC4-217ENST00000574897 MRPL46Q9H2W6 279 aaKnown RBP23.79■■□□□ 1.4
NPLOC4-217ENST00000574897 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.79■■□□□ 1.4
NPLOC4-217ENST00000574897 RAP2CQ9Y3L5 183 aa23.79■■□□□ 1.4
NPLOC4-217ENST00000574897 H2AFYO75367 372 aaKnown RBP23.79■■□□□ 1.4
NPLOC4-217ENST00000574897 KRT36O76013 467 aa23.79■■□□□ 1.4
NPLOC4-217ENST00000574897 S1PR4O95977 384 aa23.79■■□□□ 1.4
NPLOC4-217ENST00000574897 PRSS56P0CW18 603 aa23.79■■□□□ 1.4
NPLOC4-217ENST00000574897 KCNA5P22460 613 aa23.79■■□□□ 1.4
NPLOC4-217ENST00000574897 CPOXP36551 454 aa23.79■■□□□ 1.4
NPLOC4-217ENST00000574897 POLD2P49005 469 aa23.79■■□□□ 1.4
NPLOC4-217ENST00000574897 SEMA3AQ14563 771 aa23.79■■□□□ 1.4
NPLOC4-217ENST00000574897 RPS27LQ71UM5 84 aaKnown RBP23.79■■□□□ 1.4
NPLOC4-217ENST00000574897 MFSD1Q9H3U5 465 aa23.79■■□□□ 1.4
NPLOC4-217ENST00000574897 SMPD4Q9NXE4 827 aa23.79■■□□□ 1.4
NPLOC4-217ENST00000574897 BACE2Q9Y5Z0 518 aa23.79■■□□□ 1.4
NPLOC4-217ENST00000574897 PLXNA4Q9HCM2 1894 aa23.79■■□□□ 1.4
NPLOC4-217ENST00000574897 TMEM233B4DJY2 109 aa23.78■■□□□ 1.4
NPLOC4-217ENST00000574897 MATN2O00339 956 aa23.78■■□□□ 1.4
NPLOC4-217ENST00000574897 SLC7A4O43246 635 aa23.78■■□□□ 1.4
NPLOC4-217ENST00000574897 GNAZP19086 355 aa23.78■■□□□ 1.4
NPLOC4-217ENST00000574897 EPHA3P29320 983 aa23.78■■□□□ 1.4
NPLOC4-217ENST00000574897 PRMT2P55345 433 aa23.78■■□□□ 1.4
NPLOC4-217ENST00000574897 TMEM207Q6UWW9 146 aa23.78■■□□□ 1.4
NPLOC4-217ENST00000574897 FEM1CQ96JP0 617 aa23.78■■□□□ 1.4
NPLOC4-217ENST00000574897 NUF2Q9BZD4 464 aa23.78■■□□□ 1.4
NPLOC4-217ENST00000574897 FAM96AQ9H5X1 160 aa23.78■■□□□ 1.4
NPLOC4-217ENST00000574897 CYP4F12Q9HCS2 524 aa23.78■■□□□ 1.4
NPLOC4-217ENST00000574897 AFF4Q9UHB7 1163 aaKnown RBP23.78■■□□□ 1.4
NPLOC4-217ENST00000574897 G3BP2Q9UN86 482 aaKnown RBP23.78■■□□□ 1.4
NPLOC4-217ENST00000574897 SORCS3Q9UPU3 1222 aa23.78■■□□□ 1.4
NPLOC4-217ENST00000574897 A0A087X1B8 175 aa23.78■■□□□ 1.4
NPLOC4-217ENST00000574897 LOC100653049A0A140TA62 436 aa23.78■■□□□ 1.4
NPLOC4-217ENST00000574897 GRID2O43424 1007 aa23.78■■□□□ 1.4
NPLOC4-217ENST00000574897 KRT34O76011 436 aa23.78■■□□□ 1.4
NPLOC4-217ENST00000574897 CCDC166P0CW27 439 aa23.78■■□□□ 1.4
NPLOC4-217ENST00000574897 RPL14P50914 215 aaKnown RBP23.78■■□□□ 1.4
NPLOC4-217ENST00000574897 SLC39A5Q6ZMH5 540 aa23.78■■□□□ 1.4
NPLOC4-217ENST00000574897 LCA5Q86VQ0 697 aa23.78■■□□□ 1.4
NPLOC4-217ENST00000574897 ZNF461Q8TAF7 563 aa23.78■■□□□ 1.4
NPLOC4-217ENST00000574897 SEZ6LQ9BYH1 1024 aa23.78■■□□□ 1.4
NPLOC4-217ENST00000574897 MAGEH1Q9H213 219 aa23.78■■□□□ 1.4
NPLOC4-217ENST00000574897 POMKQ9H5K3 350 aa23.78■■□□□ 1.4
NPLOC4-217ENST00000574897 GPAMQ9HCL2 828 aa23.78■■□□□ 1.4
NPLOC4-217ENST00000574897 OGDHLQ9ULD0 1010 aa23.78■■□□□ 1.4
NPLOC4-217ENST00000574897 YIPF1Q9Y548 306 aa23.78■■□□□ 1.4
NPLOC4-217ENST00000574897 OBSL1O75147 1896 aa23.77■■□□□ 1.4
NPLOC4-217ENST00000574897 GOT2P00505 430 aaKnown RBP23.77■■□□□ 1.4
NPLOC4-217ENST00000574897 CLCN5P51795 746 aa23.77■■□□□ 1.4
NPLOC4-217ENST00000574897 PLK1P53350 603 aa23.77■■□□□ 1.4
NPLOC4-217ENST00000574897 CDH4P55283 916 aa23.77■■□□□ 1.4
NPLOC4-217ENST00000574897 ARHGEF6Q15052 776 aa23.77■■□□□ 1.4
NPLOC4-217ENST00000574897 TECRLQ5HYJ1 363 aa23.77■■□□□ 1.4
NPLOC4-217ENST00000574897 ENDOVQ8N8Q3 282 aaKnown RBP23.77■■□□□ 1.4
NPLOC4-217ENST00000574897 MMADHCQ9H3L0 296 aaPredicted RBP23.77■■□□□ 1.4
NPLOC4-217ENST00000574897 AGO1Q9UL18 857 aaKnown RBP23.77■■□□□ 1.4
NPLOC4-217ENST00000574897 RPL26L1Q9UNX3 145 aaKnown RBP23.77■■□□□ 1.4
NPLOC4-217ENST00000574897 LAMA3Q16787 3333 aa23.77■■□□□ 1.4
NPLOC4-217ENST00000574897 CCDC162PA2VCL2 907 aa23.77■■□□□ 1.4
NPLOC4-217ENST00000574897 SLC4A1P02730 911 aa23.77■■□□□ 1.4
NPLOC4-217ENST00000574897 SERPINF2P08697 491 aa23.77■■□□□ 1.4
NPLOC4-217ENST00000574897 CCL5P13501 91 aa23.77■■□□□ 1.4
NPLOC4-217ENST00000574897 TFEBP19484 476 aa23.77■■□□□ 1.4
NPLOC4-217ENST00000574897 SCNN1BP51168 640 aa23.77■■□□□ 1.4
NPLOC4-217ENST00000574897 RALGPS1Q5JS13 557 aa23.77■■□□□ 1.4
NPLOC4-217ENST00000574897 ULK2Q8IYT8 1036 aa23.77■■□□□ 1.4
NPLOC4-217ENST00000574897 PDZD8Q8NEN9 1154 aa23.77■■□□□ 1.4
NPLOC4-217ENST00000574897 CDK5RAP1Q96SZ6 601 aaKnown RBP23.77■■□□□ 1.4
NPLOC4-217ENST00000574897 MRPL57Q9BQC6 102 aaKnown RBP23.77■■□□□ 1.4
NPLOC4-217ENST00000574897 MGME1Q9BQP7 344 aa23.77■■□□□ 1.4
NPLOC4-217ENST00000574897 TCF7L2Q9NQB0 619 aa23.77■■□□□ 1.4
NPLOC4-217ENST00000574897 TRPM5Q9NZQ8 1165 aa23.77■■□□□ 1.4
NPLOC4-217ENST00000574897 SPO11Q9Y5K1 396 aa23.77■■□□□ 1.4
NPLOC4-217ENST00000574897 ABLIM3O94929 683 aa23.76■■□□□ 1.39
NPLOC4-217ENST00000574897 FGF1P05230 155 aa23.76■■□□□ 1.39
NPLOC4-217ENST00000574897 OXCT1P55809 520 aa23.76■■□□□ 1.39
NPLOC4-217ENST00000574897 TSNAXIP1Q2TAA8 658 aa23.76■■□□□ 1.39
NPLOC4-217ENST00000574897 EML3Q32P44 896 aa23.76■■□□□ 1.39
NPLOC4-217ENST00000574897 ACBD5Q5T8D3 534 aaPredicted RBP23.76■■□□□ 1.39
NPLOC4-217ENST00000574897 SCUBE1Q8IWY4 988 aa23.76■■□□□ 1.39
NPLOC4-217ENST00000574897 FAM136AQ96C01 138 aa23.76■■□□□ 1.39
NPLOC4-217ENST00000574897 TRIB3Q96RU7 358 aa23.76■■□□□ 1.39
NPLOC4-217ENST00000574897 CYP2S1Q96SQ9 504 aa23.76■■□□□ 1.39
NPLOC4-217ENST00000574897 UBA2Q9UBT2 640 aaPredicted RBP23.76■■□□□ 1.39
NPLOC4-217ENST00000574897 ANKRD12Q6UB98 2062 aa23.76■■□□□ 1.39
NPLOC4-217ENST00000574897 GBF1Q92538 1859 aa23.76■■□□□ 1.39
NPLOC4-217ENST00000574897 CBX4O00257 560 aa23.76■■□□□ 1.39
NPLOC4-217ENST00000574897 MAGEC1O60732 1142 aa23.76■■□□□ 1.39
NPLOC4-217ENST00000574897 HNRNPLP14866 589 aaKnown RBP eCLIP23.76■■□□□ 1.39
NPLOC4-217ENST00000574897 HLA-DPA1P20036 260 aa23.76■■□□□ 1.39
NPLOC4-217ENST00000574897 MNX1P50219 401 aaPredicted RBP23.76■■□□□ 1.39
NPLOC4-217ENST00000574897 SESN3P58005 492 aa23.76■■□□□ 1.39
NPLOC4-217ENST00000574897 ANKRD33Q7Z3H0 272 aa23.76■■□□□ 1.39
NPLOC4-217ENST00000574897 SLC22A12Q96S37 553 aa23.76■■□□□ 1.39
NPLOC4-217ENST00000574897 CINPQ9BW66 212 aaPredicted RBP23.76■■□□□ 1.39
NPLOC4-217ENST00000574897 CAMSAP3Q9P1Y5 1249 aaPredicted RBP23.76■■□□□ 1.39
NPLOC4-217ENST00000574897 MCM8Q9UJA3 840 aa23.76■■□□□ 1.39
NPLOC4-217ENST00000574897 VWA7Q9Y334 891 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms