RNA–Protein interactions for RNA: ENST00000574728.1

PRPF8-211, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-211ENST00000574728 EXOC3O60645 756 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 TACC1O75410 805 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 MATN4O95460 622 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 ASS1P00966 412 aaKnown RBP5.04□□□□□ -1.6
PRPF8-211ENST00000574728 PDGFBP01127 241 aaPredicted RBP5.04□□□□□ -1.6
PRPF8-211ENST00000574728 RHOP08100 348 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 TRIM49P0CI25 452 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 TRIM49CP0CI26 452 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 DLATP10515 647 aaKnown RBP5.04□□□□□ -1.6
PRPF8-211ENST00000574728 HAPLN1P10915 354 aaPredicted RBP5.04□□□□□ -1.6
PRPF8-211ENST00000574728 ODC1P11926 461 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 CEBPBP17676 345 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 WARSP23381 471 aaKnown RBP5.04□□□□□ -1.6
PRPF8-211ENST00000574728 ACAT1P24752 427 aaKnown RBP5.04□□□□□ -1.6
PRPF8-211ENST00000574728 PNPLA4P41247 253 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 KCNJ5P48544 419 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 CACNA2D1P54289 1103 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 SOX8P57073 446 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 NOMO3P69849 1222 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 ENPEPQ07075 957 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 BFSP1Q12934 665 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 GALEQ14376 348 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 CDSNQ15517 529 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 NRN1LQ496H8 165 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 USP39Q53GS9 565 aaKnown RBP5.04□□□□□ -1.6
PRPF8-211ENST00000574728 PPM1LQ5SGD2 360 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 LIN9Q5TKA1 542 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 ZNF658Q5TYW1 1059 aaPredicted RBP5.04□□□□□ -1.6
PRPF8-211ENST00000574728 EMC10Q5UCC4 262 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 RNF220Q5VTB9 566 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 METRNLQ641Q3 311 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 ANKRD40Q6AI12 368 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 CES5AQ6NT32 575 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 TTI2Q6NXR4 508 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 FOXR2Q6PJQ5 311 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 PARM1Q6UWI2 310 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 DSTYKQ6XUX3 929 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 PAQR9Q6ZVX9 377 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 SLC44A3Q8N4M1 653 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 SPATA18Q8TC71 538 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 CPT1CQ8TCG5 803 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 TAS1R2Q8TE23 839 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 CACTINQ8WUQ7 758 aaKnown RBP5.04□□□□□ -1.6
PRPF8-211ENST00000574728 SEMA4DQ92854 862 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 FGF13Q92913 245 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 FGF14Q92915 247 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 SCAMP4Q969E2 229 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 EEF2KMTQ96G04 330 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 NT5C1BQ96P26 610 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 LRRC3BQ96PB8 259 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 PGLYRP2Q96PD5 576 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 ACBD6Q9BR61 282 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 SARGQ9BW04 601 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 PLA2G2FQ9BZM2 168 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 DPEP3Q9H4B8 488 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 ZMAT3Q9HA38 289 aaKnown RBP5.04□□□□□ -1.6
PRPF8-211ENST00000574728 CYP4F11Q9HBI6 524 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.04□□□□□ -1.6
PRPF8-211ENST00000574728 HMGXB4Q9UGU5 601 aa5.04□□□□□ -1.6
PRPF8-211ENST00000574728 MTCL1Q9Y4B5 1905 aaKnown RBP5.03□□□□□ -1.6
PRPF8-211ENST00000574728 EP300Q09472 2414 aaPredicted RBP5.03□□□□□ -1.6
PRPF8-211ENST00000574728 COL4A3Q01955 1670 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 TRIM49BA6NDI0 452 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 ZNF785A8K8V0 405 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 IKBKBO14920 756 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 PRSS23O95084 383 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 CHEK2O96017 543 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 FAM163BP0C2L3 166 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 TMEM191BP0C7N4 346 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 ALADP13716 330 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 NR2F2P24468 414 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 CYP2F1P24903 491 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 CDH8P55286 799 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 ARPP19P56211 112 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 PSMC1P62191 440 aaKnown RBP5.03□□□□□ -1.6
PRPF8-211ENST00000574728 UBE2HP62256 183 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 TWF1Q12792 350 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 CFAP221Q4G0U5 840 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 SLC39A12Q504Y0 691 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 FAM78AQ5JUQ0 283 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 STXBP5Q5T5C0 1151 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 SPOPLQ6IQ16 392 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 DPY19L2P1Q6NXN4 242 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 DNAJB7Q7Z6W7 309 aaPredicted RBP5.03□□□□□ -1.6
PRPF8-211ENST00000574728 ADGRF2Q8IZF7 708 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 TMEM86AQ8N2M4 240 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 TDRD5Q8NAT2 981 aaKnown RBP5.03□□□□□ -1.6
PRPF8-211ENST00000574728 STKLD1Q8NE28 680 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 TMIEQ8NEW7 156 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 OR56A1Q8NGH5 318 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 IL17DQ8TAD2 202 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 LMO3Q8TAP4 145 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 GPT2Q8TD30 523 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 LRTOMTQ8WZ04 291 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 EXTL1Q92935 676 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 PSMG2Q969U7 264 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 SLC35C1Q96A29 364 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 ZNF560Q96MR9 790 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 KLHL32Q96NJ5 620 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 TWNKQ96RR1 684 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms