RNA–Protein interactions for RNA: ENST00000574151.5

HCFC1R1-206, Transcript of host cell factor C1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC1R1, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-206ENST00000574151 PMS2P1A4D2B8 440 aa10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 CHUKO15111 745 aa10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 SYNCRIPO60506 623 aaKnown RBP10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 TSPAN3O60637 253 aa10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 HNRNPCL1O60812 293 aaKnown RBP10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 ATP5HO75947 161 aa10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 IGLV3-19P01714 112 aa10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 KRT7P08729 469 aa10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 RARAP10276 462 aa10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 GRNP28799 593 aaKnown RBP10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 EPHA8P29322 1005 aaPredicted RBP10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 CDH5P33151 784 aaPredicted RBP10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 PHBP35232 272 aa10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 CASRP41180 1078 aa10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 RGS7P49802 495 aa10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 SLC5A3P53794 718 aa10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 USP46P62068 366 aa10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 YWHAZP63104 245 aaKnown RBP10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 CYP4F2P78329 520 aa10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 MRPS25P82663 173 aaKnown RBP10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 ZNF211Q13398 564 aaPredicted RBP10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 SLC29A2Q14542 456 aa10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 CLCA4Q14CN2 919 aa10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 MORF4L2Q15014 288 aa10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 HADHQ16836 314 aaKnown RBP10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 RNF187Q5TA31 235 aaPredicted RBP10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 CDCP2Q5VXM1 449 aa10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 PMF1Q6P1K2 205 aa10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 CCDC91Q7Z6B0 441 aa10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 DDX42Q86XP3 938 aaKnown RBP eCLIP10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 SCML4Q8N228 414 aa10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 RAPGEF5Q92565 580 aa10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 KRT35Q92764 455 aa10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 FAM149B1Q96BN6 582 aa10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 CCDC114Q96M63 670 aa10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 SLC6A18Q96N87 628 aa10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 PCDHB18PQ96TA0 734 aa10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 SELENOSQ9BQE4 189 aa10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 TRIM31Q9BZY9 425 aa10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 DCLK3Q9C098 648 aa10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 PCED1AQ9H1Q7 454 aa10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 SSU72Q9NP77 194 aaKnown RBP10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 ABCC13Q9NSE7 274 aa10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 OLA1Q9NTK5 396 aaKnown RBP10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 GEMIN8Q9NWZ8 242 aaKnown RBP10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 SHOC2Q9UQ13 582 aa10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 SH3BP1Q9Y3L3 701 aa10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 NME7Q9Y5B8 376 aa10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 CAPN7Q9Y6W3 813 aa10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 RP1P56715 2156 aa10.19□□□□□ -0.78
HCFC1R1-206ENST00000574151 ESPL1Q14674 2120 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 ZNF840PA6NDX5 716 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 TMEM110-MUSTN1A8MSY1 372 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 SIGLEC6O43699 453 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 SPAG6O75602 509 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 SEMA4FO95754 770 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 KRT3P12035 628 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 TYRP14679 529 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 CHN1P15882 459 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 PFKLP17858 780 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 MMP8P22894 467 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 DCTP40126 519 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 ARRB1P49407 418 aaPredicted RBP10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 LIG3P49916 1009 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 COPAP53621 1224 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 NOMO3P69849 1222 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 SLC6A3Q01959 620 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 CCDC15Q0P6D6 951 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 ADIGQ0VDE8 80 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 TAF10Q12962 218 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 KLF1Q13351 362 aaPredicted RBP10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 SIX1Q15475 284 aaPredicted RBP10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 TGIF1Q15583 401 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 PROX2Q3B8N5 592 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 ZC3H12AQ5D1E8 599 aaKnown RBP10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 C4orf22Q6V702 233 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 TPGS1Q6ZTW0 290 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 VSIG1Q86XK7 387 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 TICAM1Q8IUC6 712 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 KIAA1958Q8N8K9 716 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 BHMTQ93088 406 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 WBP2Q969T9 261 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 ALKBH8Q96BT7 664 aaKnown RBP10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 ORAI3Q9BRQ5 295 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 BBS2Q9BXC9 721 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 OSBPL8Q9BZF1 889 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 CDC42EP4Q9H3Q1 356 aaKnown RBP10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 YY1AP1Q9H869 796 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 AASDHPPTQ9NRN7 309 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 RRN3Q9NYV6 651 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 CHORDC1Q9UHD1 332 aaPredicted RBP10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 SLC24A2Q9UI40 661 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 ANAPC5Q9UJX4 755 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 ATXN7L1Q9ULK2 861 aaPredicted RBP10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 STAP1Q9ULZ2 295 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 SCML2Q9UQR0 700 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 FBN3Q75N90 2809 aa10.18□□□□□ -0.78
HCFC1R1-206ENST00000574151 SPENQ96T58 3664 aaKnown RBP10.17□□□□□ -0.78
HCFC1R1-206ENST00000574151 FAM47DPA6NHR8 397 aa10.17□□□□□ -0.78
HCFC1R1-206ENST00000574151 E5RJQ4 531 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms