RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 CELF5Q8N6W0 485 aaKnown RBP29.28■■■□□ 2.28
CTDNEP1-208ENST00000573600 ARMC2Q8NEN0 867 aa29.28■■■□□ 2.28
CTDNEP1-208ENST00000573600 LPCAT1Q8NF37 534 aa29.28■■■□□ 2.28
CTDNEP1-208ENST00000573600 HDAC10Q969S8 669 aa29.28■■■□□ 2.28
CTDNEP1-208ENST00000573600 CDCA3Q99618 268 aaPredicted RBP29.28■■■□□ 2.28
CTDNEP1-208ENST00000573600 ARL5AQ9Y689 179 aa29.28■■■□□ 2.28
CTDNEP1-208ENST00000573600 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP29.27■■■□□ 2.28
CTDNEP1-208ENST00000573600 ANKRD66B4E2M5 251 aa29.27■■■□□ 2.28
CTDNEP1-208ENST00000573600 NEDD8-MDP1E9PL57 170 aa29.27■■■□□ 2.28
CTDNEP1-208ENST00000573600 RPP40O75818 363 aaKnown RBP29.27■■■□□ 2.28
CTDNEP1-208ENST00000573600 NEFHP12036 1026 aa29.27■■■□□ 2.28
CTDNEP1-208ENST00000573600 HLA-FP30511 346 aa29.27■■■□□ 2.28
CTDNEP1-208ENST00000573600 CMC1Q7Z7K0 106 aa29.27■■■□□ 2.28
CTDNEP1-208ENST00000573600 OR6P1Q8NGX9 317 aa29.27■■■□□ 2.28
CTDNEP1-208ENST00000573600 MARK1Q9P0L2 795 aa29.27■■■□□ 2.28
CTDNEP1-208ENST00000573600 PHTF1Q9UMS5 762 aa29.27■■■□□ 2.28
CTDNEP1-208ENST00000573600 K7ERQ8 282 aa29.26■■■□□ 2.27
CTDNEP1-208ENST00000573600 BIRC5O15392 142 aa29.26■■■□□ 2.27
CTDNEP1-208ENST00000573600 PDHA1P08559 390 aa29.26■■■□□ 2.27
CTDNEP1-208ENST00000573600 ABCG1P45844 678 aa29.26■■■□□ 2.27
CTDNEP1-208ENST00000573600 LEPRP48357 1165 aaKnown RBP29.26■■■□□ 2.27
CTDNEP1-208ENST00000573600 ITIH4Q14624 930 aa29.26■■■□□ 2.27
CTDNEP1-208ENST00000573600 ITFG1Q8TB96 612 aa29.26■■■□□ 2.27
CTDNEP1-208ENST00000573600 SLC39A10Q9ULF5 831 aa29.26■■■□□ 2.27
CTDNEP1-208ENST00000573600 ANKRD6Q9Y2G4 727 aa29.26■■■□□ 2.27
CTDNEP1-208ENST00000573600 STARD13Q9Y3M8 1113 aa29.26■■■□□ 2.27
CTDNEP1-208ENST00000573600 KCTD3Q9Y597 815 aa29.26■■■□□ 2.27
CTDNEP1-208ENST00000573600 A0A096LPK6 155 aa29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 C2orf81A6NN90 581 aa29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 EDF1O60869 148 aaKnown RBP29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 PRKCGP05129 697 aa29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 F7P08709 466 aaPredicted RBP29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 DMC1Q14565 340 aa29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 PPM1JQ5JR12 505 aa29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 ATXN7L2Q5T6C5 722 aaPredicted RBP29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 N4BP2L1Q5TBK1 243 aaPredicted RBP29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 FAM47EQ6ZV65 393 aa29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 GLT6D1Q7Z4J2 308 aa29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 LINC00597Q9H2U6 94 aa29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 DZANK1Q9NVP4 752 aa29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 NLE1Q9NVX2 485 aaPredicted RBP29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 HACD3Q9P035 362 aa29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 KLF11O14901 512 aa29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 SMAD6O43541 496 aaKnown RBP29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 FZD6O60353 706 aa29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 IGSF6O95976 241 aa29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 PIRTP0C851 137 aa29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 CSRP3P50461 194 aa29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 ARSDP51689 593 aa29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 USP10Q14694 798 aaKnown RBP29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 CBX2Q14781 532 aaPredicted RBP29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 TMC5Q6UXY8 1006 aa29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 PTAR1Q7Z6K3 402 aaPredicted RBP29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 LCA5Q86VQ0 697 aa29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 ADGRG2Q8IZP9 1017 aa29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 OTUD6BQ8N6M0 293 aa29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 C12orf76Q8N812 135 aaPredicted RBP29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 RAB3IL1Q8TBN0 382 aa29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 PDCD6IPQ8WUM4 868 aaKnown RBP29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 DNAJC1Q96KC8 554 aaKnown RBP29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 TBATAQ96M53 351 aa29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 CAB39LQ9H9S4 337 aa29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 TLK1Q9UKI8 766 aa29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 USP15Q9Y4E8 981 aaPredicted RBP29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 SPO11Q9Y5K1 396 aa29.25■■■□□ 2.27
CTDNEP1-208ENST00000573600 FAM95CA0A1B0GW59 222 aa29.24■■■□□ 2.27
CTDNEP1-208ENST00000573600 C2P06681 752 aa29.24■■■□□ 2.27
CTDNEP1-208ENST00000573600 TYRP14679 529 aa29.24■■■□□ 2.27
CTDNEP1-208ENST00000573600 PSMA3P25788 255 aa29.24■■■□□ 2.27
CTDNEP1-208ENST00000573600 SULT2A1Q06520 285 aa29.24■■■□□ 2.27
CTDNEP1-208ENST00000573600 KCNC3Q14003 757 aa29.24■■■□□ 2.27
CTDNEP1-208ENST00000573600 CCDC153Q494R4 210 aa29.24■■■□□ 2.27
CTDNEP1-208ENST00000573600 SPATA21Q7Z572 469 aa29.24■■■□□ 2.27
CTDNEP1-208ENST00000573600 CILP2Q8IUL8 1156 aa29.24■■■□□ 2.27
CTDNEP1-208ENST00000573600 GPR150Q8NGU9 434 aa29.24■■■□□ 2.27
CTDNEP1-208ENST00000573600 GDPD5Q8WTR4 605 aa29.24■■■□□ 2.27
CTDNEP1-208ENST00000573600 ISG20Q96AZ6 181 aaKnown RBP29.24■■■□□ 2.27
CTDNEP1-208ENST00000573600 SLC2A11Q9BYW1 496 aa29.24■■■□□ 2.27
CTDNEP1-208ENST00000573600 TM6SF2Q9BZW4 377 aa29.24■■■□□ 2.27
CTDNEP1-208ENST00000573600 SLC25A13Q9UJS0 675 aa29.24■■■□□ 2.27
CTDNEP1-208ENST00000573600 HS3ST2Q9Y278 367 aa29.24■■■□□ 2.27
CTDNEP1-208ENST00000573600 MYOFQ9NZM1 2061 aa29.23■■■□□ 2.27
CTDNEP1-208ENST00000573600 PLIN3O60664 434 aa29.23■■■□□ 2.27
CTDNEP1-208ENST00000573600 GLP2RO95838 553 aa29.23■■■□□ 2.27
CTDNEP1-208ENST00000573600 PABPC1P11940 636 aaKnown RBP29.23■■■□□ 2.27
CTDNEP1-208ENST00000573600 ZNF140P52738 457 aaPredicted RBP29.23■■■□□ 2.27
CTDNEP1-208ENST00000573600 FUT11Q495W5 492 aa29.23■■■□□ 2.27
CTDNEP1-208ENST00000573600 TAF1BQ53T94 588 aaPredicted RBP29.23■■■□□ 2.27
CTDNEP1-208ENST00000573600 LY6G5CQ5SRR4 150 aa29.23■■■□□ 2.27
CTDNEP1-208ENST00000573600 ARMC12Q5T9G4 340 aa29.23■■■□□ 2.27
CTDNEP1-208ENST00000573600 CLEC14AQ86T13 490 aa29.23■■■□□ 2.27
CTDNEP1-208ENST00000573600 WNT6Q9Y6F9 365 aa29.23■■■□□ 2.27
CTDNEP1-208ENST00000573600 HAUS5O94927 633 aa29.23■■■□□ 2.27
CTDNEP1-208ENST00000573600 TOP3BO95985 862 aaKnown RBP29.23■■■□□ 2.27
CTDNEP1-208ENST00000573600 BPGMP07738 259 aa29.23■■■□□ 2.27
CTDNEP1-208ENST00000573600 GRIA4P48058 902 aa29.23■■■□□ 2.27
CTDNEP1-208ENST00000573600 CLCN5P51795 746 aa29.23■■■□□ 2.27
CTDNEP1-208ENST00000573600 RPL26P61254 145 aaKnown RBP29.23■■■□□ 2.27
CTDNEP1-208ENST00000573600 POU4F1Q01851 419 aa29.23■■■□□ 2.27
CTDNEP1-208ENST00000573600 C6orf89Q6UWU4 347 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms