RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 AKR1B15C9JRZ8 316 aaPredicted RBP12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 K7ESM1 405 aa12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 TAF4O00268 1085 aa12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 AQP9O43315 295 aa12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 AKR1B10O60218 316 aa12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 PCCBP05166 539 aa12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 CD48P09326 243 aa12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 H2AFZP0C0S5 128 aa12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 MMP12P39900 470 aa12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 AP1S1P61966 158 aa12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 YPEL5P62699 121 aa12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 POLR2LP62875 67 aaKnown RBP12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 CYP4F3Q08477 520 aa12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 EIF2B5Q13144 721 aaKnown RBP12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 TARDBPQ13148 414 aaKnown RBP eCLIP12.79□□□□□ -0.361e-7■■■■□ 20.6
NPLOC4-213ENST00000573519 MMRN1Q13201 1228 aa12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 TBX2Q13207 712 aaPredicted RBP12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 C1orf61Q13536 156 aa12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 SLC18A3Q16572 532 aa12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 DEFB133Q30KQ1 61 aa12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 FAXCQ5TGI0 409 aa12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 SARM1Q6SZW1 724 aa12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 H2AFVQ71UI9 128 aa12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 PHACTR4Q8IZ21 702 aa12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 PDCD7Q8N8D1 485 aaKnown RBP12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 KCTD6Q8NC69 237 aa12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 BTN2A2Q8WVV5 523 aa12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 PSKH2Q96QS6 385 aa12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 IL12RB2Q99665 862 aa12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 DUSP23Q9BVJ7 150 aa12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 SLC13A1Q9BZW2 595 aa12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 TCEAL2Q9H3H9 227 aaPredicted RBP12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 NHEJ1Q9H9Q4 299 aaPredicted RBP12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 SCUBE2Q9NQ36 999 aa12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 SPTLC3Q9NUV7 552 aa12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 EVA1BQ9NVM1 165 aa12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 SPASTQ9UBP0 616 aa12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 USP24Q9UPU5 2620 aa12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 PTPRBP23467 1997 aa12.79□□□□□ -0.36
NPLOC4-213ENST00000573519 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.78□□□□□ -0.36
NPLOC4-213ENST00000573519 SSU72P8A0A1W2PR75 194 aa12.78□□□□□ -0.36
NPLOC4-213ENST00000573519 MAFKO60675 156 aa12.78□□□□□ -0.36
NPLOC4-213ENST00000573519 PROSCO94903 275 aa12.78□□□□□ -0.36
NPLOC4-213ENST00000573519 CAPNS1P04632 268 aa12.78□□□□□ -0.36
NPLOC4-213ENST00000573519 ELFN1P0C7U0 828 aa12.78□□□□□ -0.36
NPLOC4-213ENST00000573519 GIMD1P0DJR0 217 aa12.78□□□□□ -0.36
NPLOC4-213ENST00000573519 CKMT1AP12532 417 aa12.78□□□□□ -0.36
NPLOC4-213ENST00000573519 HTR1BP28222 390 aa12.78□□□□□ -0.36
NPLOC4-213ENST00000573519 MAXP61244 160 aa12.78□□□□□ -0.36
NPLOC4-213ENST00000573519 PPARDQ03181 441 aa12.78□□□□□ -0.36
NPLOC4-213ENST00000573519 ITKQ08881 620 aa12.78□□□□□ -0.36
NPLOC4-213ENST00000573519 CAMK2BQ13554 666 aa12.78□□□□□ -0.36
NPLOC4-213ENST00000573519 INPP5AQ14642 412 aa12.78□□□□□ -0.36
NPLOC4-213ENST00000573519 TCEA2Q15560 299 aa12.78□□□□□ -0.36
NPLOC4-213ENST00000573519 WSCD2Q2TBF2 565 aa12.78□□□□□ -0.36
NPLOC4-213ENST00000573519 ATP13A4Q4VNC1 1196 aa12.78□□□□□ -0.36
NPLOC4-213ENST00000573519 PRRT3Q5FWE3 981 aa12.78□□□□□ -0.36
NPLOC4-213ENST00000573519 MARC1Q5VT66 337 aa12.78□□□□□ -0.36
NPLOC4-213ENST00000573519 MACC1Q6ZN28 852 aa12.78□□□□□ -0.36
NPLOC4-213ENST00000573519 RD3Q7Z3Z2 195 aa12.78□□□□□ -0.36
NPLOC4-213ENST00000573519 CCDC42Q96M95 316 aa12.78□□□□□ -0.36
NPLOC4-213ENST00000573519 UVRAGQ9P2Y5 699 aa12.78□□□□□ -0.36
NPLOC4-213ENST00000573519 RALYQ9UKM9 306 aaKnown RBP12.78□□□□□ -0.36
NPLOC4-213ENST00000573519 CLCA2Q9UQC9 943 aa12.78□□□□□ -0.36
NPLOC4-213ENST00000573519 OR1A2Q9Y585 309 aa12.78□□□□□ -0.36
NPLOC4-213ENST00000573519 PCDHGC4Q9Y5F7 938 aa12.78□□□□□ -0.36
NPLOC4-213ENST00000573519 TPRP12270 2363 aaKnown RBP12.78□□□□□ -0.36
NPLOC4-213ENST00000573519 CPED1A4D0V7 1026 aa12.77□□□□□ -0.37
NPLOC4-213ENST00000573519 TOR1BO14657 336 aa12.77□□□□□ -0.37
NPLOC4-213ENST00000573519 MFSD11O43934 449 aa12.77□□□□□ -0.37
NPLOC4-213ENST00000573519 MAP3K6O95382 1288 aa12.77□□□□□ -0.37
NPLOC4-213ENST00000573519 PEX11BO96011 259 aa12.77□□□□□ -0.37
NPLOC4-213ENST00000573519 CPP00450 1065 aa12.77□□□□□ -0.37
NPLOC4-213ENST00000573519 IL4RP24394 825 aa12.77□□□□□ -0.37
NPLOC4-213ENST00000573519 HSPA9P38646 679 aaKnown RBP12.77□□□□□ -0.37
NPLOC4-213ENST00000573519 MMP13P45452 471 aa12.77□□□□□ -0.37
NPLOC4-213ENST00000573519 DUSP3P51452 185 aaPredicted RBP12.77□□□□□ -0.37
NPLOC4-213ENST00000573519 ZNF75DP51815 510 aa12.77□□□□□ -0.37
NPLOC4-213ENST00000573519 E2F1Q01094 437 aa12.77□□□□□ -0.37
NPLOC4-213ENST00000573519 INSM1Q01101 510 aaPredicted RBP12.77□□□□□ -0.37
NPLOC4-213ENST00000573519 DPYSL3Q14195 570 aa12.77□□□□□ -0.37
NPLOC4-213ENST00000573519 ACOX1Q15067 660 aa12.77□□□□□ -0.37
NPLOC4-213ENST00000573519 CDKN3Q16667 212 aa12.77□□□□□ -0.37
NPLOC4-213ENST00000573519 DENND2CQ68D51 928 aa12.77□□□□□ -0.37
NPLOC4-213ENST00000573519 ZCCHC8Q6NZY4 707 aaKnown RBP12.77□□□□□ -0.37
NPLOC4-213ENST00000573519 ENPP7Q6UWV6 458 aa12.77□□□□□ -0.37
NPLOC4-213ENST00000573519 HID1Q8IV36 788 aa12.77□□□□□ -0.37
NPLOC4-213ENST00000573519 PGBD5Q8N414 524 aa12.77□□□□□ -0.37
NPLOC4-213ENST00000573519 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.77□□□□□ -0.37
NPLOC4-213ENST00000573519 IFI44Q8TCB0 444 aa12.77□□□□□ -0.37
NPLOC4-213ENST00000573519 ECHDC3Q96DC8 303 aa12.77□□□□□ -0.37
NPLOC4-213ENST00000573519 NXPE2Q96DL1 559 aa12.77□□□□□ -0.37
NPLOC4-213ENST00000573519 NSMCE3Q96MG7 304 aa12.77□□□□□ -0.37
NPLOC4-213ENST00000573519 NUDCD1Q96RS6 583 aa12.77□□□□□ -0.37
NPLOC4-213ENST00000573519 APOOQ9BUR5 198 aa12.77□□□□□ -0.37
NPLOC4-213ENST00000573519 ABCG4Q9H172 646 aa12.77□□□□□ -0.37
NPLOC4-213ENST00000573519 NOD2Q9HC29 1040 aa12.77□□□□□ -0.37
NPLOC4-213ENST00000573519 NT5MQ9NPB1 228 aa12.77□□□□□ -0.37
NPLOC4-213ENST00000573519 RCOR3Q9P2K3 495 aaPredicted RBP12.77□□□□□ -0.37
NPLOC4-213ENST00000573519 PNMA8BQ9ULN7 279 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms