RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 AP1B1Q10567 949 aa20.82■□□□□ 0.92
CHMP6-204ENST00000572778 PDK1Q15118 436 aa20.82■□□□□ 0.92
CHMP6-204ENST00000572778 PTAR1Q7Z6K3 402 aaPredicted RBP20.82■□□□□ 0.92
CHMP6-204ENST00000572778 ABI3BPQ7Z7G0 1075 aa20.82■□□□□ 0.92
CHMP6-204ENST00000572778 RCOR2Q8IZ40 523 aa20.82■□□□□ 0.92
CHMP6-204ENST00000572778 KIAA1524Q8TCG1 905 aa20.82■□□□□ 0.92
CHMP6-204ENST00000572778 RHBDD1Q8TEB9 315 aa20.82■□□□□ 0.92
CHMP6-204ENST00000572778 KRT35Q92764 455 aa20.82■□□□□ 0.92
CHMP6-204ENST00000572778 ERVMER34-1Q9H9K5 563 aa20.82■□□□□ 0.92
CHMP6-204ENST00000572778 COQ6Q9Y2Z9 468 aa20.82■□□□□ 0.92
CHMP6-204ENST00000572778 MACROD2A1Z1Q3 448 aa20.81■□□□□ 0.92
CHMP6-204ENST00000572778 POM121BA6NF01 834 aa20.81■□□□□ 0.92
CHMP6-204ENST00000572778 KCNK1O00180 336 aa20.81■□□□□ 0.92
CHMP6-204ENST00000572778 HTRA2O43464 458 aaPredicted RBP20.81■□□□□ 0.92
CHMP6-204ENST00000572778 CST8O60676 142 aa20.81■□□□□ 0.92
CHMP6-204ENST00000572778 CPP00450 1065 aa20.81■□□□□ 0.92
CHMP6-204ENST00000572778 JCHAINP01591 159 aa20.81■□□□□ 0.92
CHMP6-204ENST00000572778 MMP12P39900 470 aa20.81■□□□□ 0.92
CHMP6-204ENST00000572778 ARRB1P49407 418 aaPredicted RBP20.81■□□□□ 0.92
CHMP6-204ENST00000572778 LIG3P49916 1009 aa20.81■□□□□ 0.92
CHMP6-204ENST00000572778 PPIDQ08752 370 aaKnown RBP20.81■□□□□ 0.92
CHMP6-204ENST00000572778 TRAF2Q12933 501 aa20.81■□□□□ 0.92
CHMP6-204ENST00000572778 TAZQ16635 292 aa20.81■□□□□ 0.92
CHMP6-204ENST00000572778 N4BP2L1Q5TBK1 243 aaPredicted RBP20.81■□□□□ 0.92
CHMP6-204ENST00000572778 Q6ZSR6 202 aa20.81■□□□□ 0.92
CHMP6-204ENST00000572778 OXR1Q8N573 874 aa20.81■□□□□ 0.92
CHMP6-204ENST00000572778 DENND6BQ8NEG7 585 aa20.81■□□□□ 0.92
CHMP6-204ENST00000572778 FAM174AQ8TBP5 190 aa20.81■□□□□ 0.92
CHMP6-204ENST00000572778 RBM41Q96IZ5 413 aaKnown RBP20.81■□□□□ 0.92
CHMP6-204ENST00000572778 KLF6Q99612 283 aaPredicted RBP20.81■□□□□ 0.92
CHMP6-204ENST00000572778 C1QTNF7Q9BXJ2 289 aa20.81■□□□□ 0.92
CHMP6-204ENST00000572778 TRIM10Q9UDY6 481 aa20.81■□□□□ 0.92
CHMP6-204ENST00000572778 AMACRQ9UHK6 382 aa20.81■□□□□ 0.92
CHMP6-204ENST00000572778 CACNA1EQ15878 2313 aa20.8■□□□□ 0.92
CHMP6-204ENST00000572778 A0A0U1RQJ8 604 aa20.8■□□□□ 0.92
CHMP6-204ENST00000572778 A0A1W2PQ67 120 aa20.8■□□□□ 0.92
CHMP6-204ENST00000572778 A8MX80 341 aa20.8■□□□□ 0.92
CHMP6-204ENST00000572778 PPP1R12AO14974 1030 aaPredicted RBP20.8■□□□□ 0.92
CHMP6-204ENST00000572778 FLRT2O43155 660 aa20.8■□□□□ 0.92
CHMP6-204ENST00000572778 LZTS3O60299 673 aaPredicted RBP20.8■□□□□ 0.92
CHMP6-204ENST00000572778 PCDHGA12O60330 932 aa20.8■□□□□ 0.92
CHMP6-204ENST00000572778 ITGAVP06756 1048 aa20.8■□□□□ 0.92
CHMP6-204ENST00000572778 C6P13671 934 aa20.8■□□□□ 0.92
CHMP6-204ENST00000572778 DSC2Q02487 901 aa20.8■□□□□ 0.92
CHMP6-204ENST00000572778 TFDP3Q5H9I0 405 aa20.8■□□□□ 0.92
CHMP6-204ENST00000572778 KYAT3Q6YP21 454 aaKnown RBP20.8■□□□□ 0.92
CHMP6-204ENST00000572778 BZW1Q7L1Q6 419 aaKnown RBP20.8■□□□□ 0.92
CHMP6-204ENST00000572778 GATAD2AQ86YP4 633 aa20.8■□□□□ 0.92
CHMP6-204ENST00000572778 EXD1Q8NHP7 514 aa20.8■□□□□ 0.92
CHMP6-204ENST00000572778 SEPT10Q9P0V9 454 aa20.8■□□□□ 0.92
CHMP6-204ENST00000572778 SAE1Q9UBE0 346 aaPredicted RBP20.8■□□□□ 0.92
CHMP6-204ENST00000572778 RAI2Q9Y5P3 530 aa20.8■□□□□ 0.92
CHMP6-204ENST00000572778 hCG_1818297A0A087WSY0 165 aa20.79■□□□□ 0.92
CHMP6-204ENST00000572778 SPAARA0A1B0GVQ0 90 aa20.79■□□□□ 0.92
CHMP6-204ENST00000572778 GRID2IPA4D2P6 1211 aa20.79■□□□□ 0.92
CHMP6-204ENST00000572778 YKT6O15498 198 aa20.79■□□□□ 0.92
CHMP6-204ENST00000572778 HLA-DQB2P05538 268 aa20.79■□□□□ 0.92
CHMP6-204ENST00000572778 CES1P23141 567 aa20.79■□□□□ 0.92
CHMP6-204ENST00000572778 CTNNA1P35221 906 aaKnown RBP20.79■□□□□ 0.92
CHMP6-204ENST00000572778 RABIFP47224 123 aa20.79■□□□□ 0.92
CHMP6-204ENST00000572778 NR2C2P49116 596 aa20.79■□□□□ 0.92
CHMP6-204ENST00000572778 SIM1P81133 766 aaPredicted RBP20.79■□□□□ 0.92
CHMP6-204ENST00000572778 BNIP3Q12983 259 aa20.79■□□□□ 0.92
CHMP6-204ENST00000572778 SHBQ15464 509 aa20.79■□□□□ 0.92
CHMP6-204ENST00000572778 ARMC12Q5T9G4 340 aa20.79■□□□□ 0.92
CHMP6-204ENST00000572778 KDM7AQ6ZMT4 941 aa20.79■□□□□ 0.92
CHMP6-204ENST00000572778 DBX2Q6ZNG2 339 aa20.79■□□□□ 0.92
CHMP6-204ENST00000572778 B4GALNT4Q76KP1 1039 aa20.79■□□□□ 0.92
CHMP6-204ENST00000572778 CENPTQ96BT3 561 aa20.79■□□□□ 0.92
CHMP6-204ENST00000572778 OLFM3Q96PB7 478 aa20.79■□□□□ 0.92
CHMP6-204ENST00000572778 PCOLCE2Q9UKZ9 415 aa20.79■□□□□ 0.92
CHMP6-204ENST00000572778 PHTF1Q9UMS5 762 aa20.79■□□□□ 0.92
CHMP6-204ENST00000572778 BTBD3Q9Y2F9 522 aa20.79■□□□□ 0.92
CHMP6-204ENST00000572778 PCDHA3Q9Y5H8 950 aa20.79■□□□□ 0.92
CHMP6-204ENST00000572778 CCDC66A2RUB6 948 aa20.78■□□□□ 0.92
CHMP6-204ENST00000572778 PGLSO95336 258 aa20.78■□□□□ 0.92
CHMP6-204ENST00000572778 ADRB1P08588 477 aa20.78■□□□□ 0.92
CHMP6-204ENST00000572778 PECAM1P16284 738 aaPredicted RBP20.78■□□□□ 0.92
CHMP6-204ENST00000572778 TGM2P21980 687 aa20.78■□□□□ 0.92
CHMP6-204ENST00000572778 EPHA8P29322 1005 aaPredicted RBP20.78■□□□□ 0.92
CHMP6-204ENST00000572778 GRK6P43250 576 aa20.78■□□□□ 0.92
CHMP6-204ENST00000572778 ADCY2Q08462 1091 aa20.78■□□□□ 0.92
CHMP6-204ENST00000572778 RALGDSQ12967 914 aa20.78■□□□□ 0.92
CHMP6-204ENST00000572778 ZBTB17Q13105 803 aa20.78■□□□□ 0.92
CHMP6-204ENST00000572778 LRRC14Q15048 493 aa20.78■□□□□ 0.92
CHMP6-204ENST00000572778 TRIP6Q15654 476 aaKnown RBP20.78■□□□□ 0.92
CHMP6-204ENST00000572778 ALG1LQ6GMV1 187 aa20.78■□□□□ 0.92
CHMP6-204ENST00000572778 DPPA4Q7L190 304 aa20.78■□□□□ 0.92
CHMP6-204ENST00000572778 DCP2Q8IU60 420 aaKnown RBP20.78■□□□□ 0.92
CHMP6-204ENST00000572778 SLC22A18ASQ8N1D0 253 aa20.78■□□□□ 0.92
CHMP6-204ENST00000572778 LRRC57Q8N9N7 239 aa20.78■□□□□ 0.92
CHMP6-204ENST00000572778 HAUS1Q96CS2 278 aa20.78■□□□□ 0.92
CHMP6-204ENST00000572778 IL12RB2Q99665 862 aa20.78■□□□□ 0.92
CHMP6-204ENST00000572778 HEMGNQ9BXL5 484 aa20.78■□□□□ 0.92
CHMP6-204ENST00000572778 CEP41Q9BYV8 373 aa20.78■□□□□ 0.92
CHMP6-204ENST00000572778 BRD8Q9H0E9 1235 aa20.78■□□□□ 0.92
CHMP6-204ENST00000572778 MBNL1Q9NR56 388 aaKnown RBP20.78■□□□□ 0.92
CHMP6-204ENST00000572778 B4GALT6Q9UBX8 382 aa20.78■□□□□ 0.92
CHMP6-204ENST00000572778 AMFRQ9UKV5 643 aa20.78■□□□□ 0.92
CHMP6-204ENST00000572778 CFAP69A5D8W1 941 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms