RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 IGSF6O95976 241 aa20.03■□□□□ 0.8
CCDC40-206ENST00000572083 GLB1P16278 677 aa20.03■□□□□ 0.8
CCDC40-206ENST00000572083 XPAP23025 273 aaPredicted RBP20.03■□□□□ 0.8
CCDC40-206ENST00000572083 RAD51Q06609 339 aa20.03■□□□□ 0.8
CCDC40-206ENST00000572083 TMEM52BQ4KMG9 183 aa20.03■□□□□ 0.8
CCDC40-206ENST00000572083 PTRH1Q86Y79 214 aaKnown RBP20.03■□□□□ 0.8
CCDC40-206ENST00000572083 SLITRK4Q8IW52 837 aa20.03■□□□□ 0.8
CCDC40-206ENST00000572083 FAM71AQ8IYT1 594 aa20.03■□□□□ 0.8
CCDC40-206ENST00000572083 TMEM159Q96B96 161 aa20.03■□□□□ 0.8
CCDC40-206ENST00000572083 EXOC2Q96KP1 924 aa20.03■□□□□ 0.8
CCDC40-206ENST00000572083 WDR92Q96MX6 357 aa20.03■□□□□ 0.8
CCDC40-206ENST00000572083 RBM15Q96T37 977 aaKnown RBP eCLIP20.03■□□□□ 0.8
CCDC40-206ENST00000572083 METTL5Q9NRN9 209 aaKnown RBP20.03■□□□□ 0.8
CCDC40-206ENST00000572083 GEMIN8Q9NWZ8 242 aaKnown RBP20.03■□□□□ 0.8
CCDC40-206ENST00000572083 ANKMY1Q9P2S6 941 aa20.03■□□□□ 0.8
CCDC40-206ENST00000572083 APPL1Q9UKG1 709 aa20.03■□□□□ 0.8
CCDC40-206ENST00000572083 A0A1W2PQC6 194 aa20.02■□□□□ 0.8
CCDC40-206ENST00000572083 GTPBP10A4D1E9 387 aaKnown RBP20.02■□□□□ 0.8
CCDC40-206ENST00000572083 LRIG2O94898 1065 aa20.02■□□□□ 0.8
CCDC40-206ENST00000572083 CYP11B1P15538 503 aa20.02■□□□□ 0.8
CCDC40-206ENST00000572083 RHOAP61586 193 aa20.02■□□□□ 0.8
CCDC40-206ENST00000572083 ELP6Q0PNE2 266 aa20.02■□□□□ 0.8
CCDC40-206ENST00000572083 C15orf59Q2T9L4 293 aaPredicted RBP20.02■□□□□ 0.8
CCDC40-206ENST00000572083 TAF8Q7Z7C8 310 aa20.02■□□□□ 0.8
CCDC40-206ENST00000572083 FAM46DQ8NEK8 389 aa20.02■□□□□ 0.8
CCDC40-206ENST00000572083 SEMA6CQ9H3T2 930 aa20.02■□□□□ 0.8
CCDC40-206ENST00000572083 DKK3Q9UBP4 350 aa20.02■□□□□ 0.8
CCDC40-206ENST00000572083 LRRK2Q5S007 2527 aa20.01■□□□□ 0.79
CCDC40-206ENST00000572083 KDELR3O43731 214 aa20.01■□□□□ 0.79
CCDC40-206ENST00000572083 TNFP01375 233 aa20.01■□□□□ 0.79
CCDC40-206ENST00000572083 ADRA1BP35368 520 aa20.01■□□□□ 0.79
CCDC40-206ENST00000572083 NRG1Q02297 640 aaPredicted RBP20.01■□□□□ 0.79
CCDC40-206ENST00000572083 RAPGEF1Q13905 1077 aa20.01■□□□□ 0.79
CCDC40-206ENST00000572083 C16orf72Q14CZ0 275 aa20.01■□□□□ 0.79
CCDC40-206ENST00000572083 MAP9Q49MG5 647 aa20.01■□□□□ 0.79
CCDC40-206ENST00000572083 ATL2Q8NHH9 583 aa20.01■□□□□ 0.79
CCDC40-206ENST00000572083 OR1E3Q8WZA6 343 aa20.01■□□□□ 0.79
CCDC40-206ENST00000572083 TBC1D31Q96DN5 1066 aa20.01■□□□□ 0.79
CCDC40-206ENST00000572083 NCAPGQ9BPX3 1015 aa20.01■□□□□ 0.79
CCDC40-206ENST00000572083 KLC2Q9H0B6 622 aa20.01■□□□□ 0.79
CCDC40-206ENST00000572083 RDH14Q9HBH5 336 aa20.01■□□□□ 0.79
CCDC40-206ENST00000572083 PCDH12Q9NPG4 1184 aa20.01■□□□□ 0.79
CCDC40-206ENST00000572083 MRPL40Q9NQ50 206 aaKnown RBP20.01■□□□□ 0.79
CCDC40-206ENST00000572083 LRIT1Q9P2V4 623 aa20.01■□□□□ 0.79
CCDC40-206ENST00000572083 ZSCAN5CA6NGD5 496 aaPredicted RBP20■□□□□ 0.79
CCDC40-206ENST00000572083 CD82P27701 267 aa20■□□□□ 0.79
CCDC40-206ENST00000572083 BPIFB4P59827 614 aa20■□□□□ 0.79
CCDC40-206ENST00000572083 ARHGEF7Q14155 803 aa20■□□□□ 0.79
CCDC40-206ENST00000572083 C14orf28Q4W4Y0 310 aa20■□□□□ 0.79
CCDC40-206ENST00000572083 PLA2G15Q8NCC3 412 aa20■□□□□ 0.79
CCDC40-206ENST00000572083 CPA5Q8WXQ8 436 aa20■□□□□ 0.79
CCDC40-206ENST00000572083 HMCESQ96FZ2 354 aa20■□□□□ 0.79
CCDC40-206ENST00000572083 EPN3Q9H201 632 aa20■□□□□ 0.79
CCDC40-206ENST00000572083 FGF22Q9HCT0 170 aa20■□□□□ 0.79
CCDC40-206ENST00000572083 SEPT3Q9UH03 358 aa20■□□□□ 0.79
CCDC40-206ENST00000572083 MFHAS1Q9Y4C4 1052 aa20■□□□□ 0.79
CCDC40-206ENST00000572083 DGKBQ9Y6T7 804 aa20■□□□□ 0.79
CCDC40-206ENST00000572083 ZFC3H1O60293 1989 aaKnown RBP20■□□□□ 0.79
CCDC40-206ENST00000572083 SDK2Q58EX2 2172 aa20■□□□□ 0.79
CCDC40-206ENST00000572083 TMEM202A6NGA9 273 aa19.99■□□□□ 0.79
CCDC40-206ENST00000572083 PRKCGP05129 697 aa19.99■□□□□ 0.79
CCDC40-206ENST00000572083 CCL4P13236 92 aa19.99■□□□□ 0.79
CCDC40-206ENST00000572083 PNLIPP16233 465 aa19.99■□□□□ 0.79
CCDC40-206ENST00000572083 MTIF2P46199 727 aaKnown RBP19.99■□□□□ 0.79
CCDC40-206ENST00000572083 LIG3P49916 1009 aa19.99■□□□□ 0.79
CCDC40-206ENST00000572083 MTM1Q13496 603 aa19.99■□□□□ 0.79
CCDC40-206ENST00000572083 HLTFQ14527 1009 aaKnown RBP eCLIP19.99■□□□□ 0.79
CCDC40-206ENST00000572083 SKIDA1Q1XH10 827 aa19.99■□□□□ 0.79
CCDC40-206ENST00000572083 BORAQ6PGQ7 559 aa19.99■□□□□ 0.79
CCDC40-206ENST00000572083 OGFOD3Q6PK18 319 aa19.99■□□□□ 0.79
CCDC40-206ENST00000572083 PHLDB2Q86SQ0 1253 aa19.99■□□□□ 0.79
CCDC40-206ENST00000572083 IRF2BP1Q8IU81 584 aa19.99■□□□□ 0.79
CCDC40-206ENST00000572083 CCDC185Q8N715 623 aa19.99■□□□□ 0.79
CCDC40-206ENST00000572083 MSANTD4Q8NCY6 345 aa19.99■□□□□ 0.79
CCDC40-206ENST00000572083 RCBTB1Q8NDN9 531 aa19.99■□□□□ 0.79
CCDC40-206ENST00000572083 ZNF564Q8TBZ8 553 aaPredicted RBP19.99■□□□□ 0.79
CCDC40-206ENST00000572083 PMEPA1Q969W9 287 aa19.99■□□□□ 0.79
CCDC40-206ENST00000572083 SLC12A9Q9BXP2 914 aa19.99■□□□□ 0.79
CCDC40-206ENST00000572083 TMEM168Q9H0V1 697 aa19.99■□□□□ 0.79
CCDC40-206ENST00000572083 DPEP2Q9H4A9 486 aa19.99■□□□□ 0.79
CCDC40-206ENST00000572083 NOL6Q9H6R4 1146 aaKnown RBP19.99■□□□□ 0.79
CCDC40-206ENST00000572083 LHX3Q9UBR4 397 aa19.99■□□□□ 0.79
CCDC40-206ENST00000572083 RWDD2AQ9UIY3 292 aa19.99■□□□□ 0.79
CCDC40-206ENST00000572083 TEX15Q9BXT5 2789 aa19.98■□□□□ 0.79
CCDC40-206ENST00000572083 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.98■□□□□ 0.79
CCDC40-206ENST00000572083 STMND1H3BQB6 276 aa19.98■□□□□ 0.79
CCDC40-206ENST00000572083 LSM8O95777 96 aaKnown RBP19.98■□□□□ 0.79
CCDC40-206ENST00000572083 PLEKP08567 350 aaPredicted RBP19.98■□□□□ 0.79
CCDC40-206ENST00000572083 MMP12P39900 470 aa19.98■□□□□ 0.79
CCDC40-206ENST00000572083 NOMO3P69849 1222 aa19.98■□□□□ 0.79
CCDC40-206ENST00000572083 UBAP2LQ14157 1087 aaKnown RBP19.98■□□□□ 0.79
CCDC40-206ENST00000572083 UGP2Q16851 508 aa19.98■□□□□ 0.79
CCDC40-206ENST00000572083 AMZ1Q400G9 498 aa19.98■□□□□ 0.79
CCDC40-206ENST00000572083 CCDC14Q49A88 953 aa19.98■□□□□ 0.79
CCDC40-206ENST00000572083 TMEM164Q5U3C3 297 aa19.98■□□□□ 0.79
CCDC40-206ENST00000572083 NAA35Q5VZE5 725 aa19.98■□□□□ 0.79
CCDC40-206ENST00000572083 SPECC1LQ69YQ0 1117 aa19.98■□□□□ 0.79
CCDC40-206ENST00000572083 SMYD5Q6GMV2 418 aa19.98■□□□□ 0.79
CCDC40-206ENST00000572083 ARCQ7LC44 396 aa19.98■□□□□ 0.79
CCDC40-206ENST00000572083 NOP9Q86U38 636 aaKnown RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms