RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 Q6ZNB5 142 aa17.46■□□□□ 0.39
RPAIN-208ENST00000571043 KIAA0408Q6ZU52 694 aa17.46■□□□□ 0.39
RPAIN-208ENST00000571043 ZC3HC1Q86WB0 502 aaKnown RBP17.46■□□□□ 0.39
RPAIN-208ENST00000571043 USP13Q92995 863 aaPredicted RBP17.46■□□□□ 0.39
RPAIN-208ENST00000571043 E2F7Q96AV8 911 aa17.46■□□□□ 0.39
RPAIN-208ENST00000571043 CINPQ9BW66 212 aaPredicted RBP17.46■□□□□ 0.39
RPAIN-208ENST00000571043 ABCF3Q9NUQ8 709 aa17.46■□□□□ 0.39
RPAIN-208ENST00000571043 SMPD4Q9NXE4 827 aa17.46■□□□□ 0.39
RPAIN-208ENST00000571043 EMCNQ9ULC0 261 aa17.46■□□□□ 0.39
RPAIN-208ENST00000571043 MYO10Q9HD67 2058 aa17.45■□□□□ 0.38
RPAIN-208ENST00000571043 NUP205Q92621 2012 aa17.45■□□□□ 0.38
RPAIN-208ENST00000571043 MUSKO15146 869 aa17.45■□□□□ 0.38
RPAIN-208ENST00000571043 MBTPS2O43462 519 aa17.45■□□□□ 0.38
RPAIN-208ENST00000571043 GREM1O60565 184 aa17.45■□□□□ 0.38
RPAIN-208ENST00000571043 TSPAN3O60637 253 aa17.45■□□□□ 0.38
RPAIN-208ENST00000571043 FGF1P05230 155 aa17.45■□□□□ 0.38
RPAIN-208ENST00000571043 SERPINF2P08697 491 aa17.45■□□□□ 0.38
RPAIN-208ENST00000571043 TCF3P15923 654 aa17.45■□□□□ 0.38
RPAIN-208ENST00000571043 ALDH3A1P30838 453 aa17.45■□□□□ 0.38
RPAIN-208ENST00000571043 MAGEA9P43362 315 aa17.45■□□□□ 0.38
RPAIN-208ENST00000571043 CSRP3P50461 194 aa17.45■□□□□ 0.38
RPAIN-208ENST00000571043 ACTN3Q08043 901 aaPredicted RBP17.45■□□□□ 0.38
RPAIN-208ENST00000571043 CCDC153Q494R4 210 aa17.45■□□□□ 0.38
RPAIN-208ENST00000571043 GALNTL6Q49A17 601 aa17.45■□□□□ 0.38
RPAIN-208ENST00000571043 SIRPB2Q5JXA9 342 aa17.45■□□□□ 0.38
RPAIN-208ENST00000571043 LCA5Q86VQ0 697 aa17.45■□□□□ 0.38
RPAIN-208ENST00000571043 FAM217AQ8IXS0 508 aa17.45■□□□□ 0.38
RPAIN-208ENST00000571043 HJURPQ8NCD3 748 aaPredicted RBP17.45■□□□□ 0.38
RPAIN-208ENST00000571043 C2CD4AQ8NCU7 369 aaPredicted RBP17.45■□□□□ 0.38
RPAIN-208ENST00000571043 CALML6Q8TD86 181 aa17.45■□□□□ 0.38
RPAIN-208ENST00000571043 C10orf82Q8WW14 230 aa17.45■□□□□ 0.38
RPAIN-208ENST00000571043 PEX13Q92968 403 aa17.45■□□□□ 0.38
RPAIN-208ENST00000571043 IFT43Q96FT9 208 aa17.45■□□□□ 0.38
RPAIN-208ENST00000571043 C7orf26Q96N11 449 aa17.45■□□□□ 0.38
RPAIN-208ENST00000571043 ASB16Q96NS5 453 aa17.45■□□□□ 0.38
RPAIN-208ENST00000571043 TRIM55Q9BYV6 548 aa17.45■□□□□ 0.38
RPAIN-208ENST00000571043 SMG9Q9H0W8 520 aaKnown RBP17.45■□□□□ 0.38
RPAIN-208ENST00000571043 TRPV4Q9HBA0 871 aa17.45■□□□□ 0.38
RPAIN-208ENST00000571043 SLC2A6Q9UGQ3 507 aa17.45■□□□□ 0.38
RPAIN-208ENST00000571043 CCL26Q9Y258 94 aa17.45■□□□□ 0.38
RPAIN-208ENST00000571043 UNC80Q8N2C7 3258 aa17.45■□□□□ 0.38
RPAIN-208ENST00000571043 MYO18AQ92614 2054 aaKnown RBP17.44■□□□□ 0.38
RPAIN-208ENST00000571043 CCDC78A2IDD5 438 aa17.44■□□□□ 0.38
RPAIN-208ENST00000571043 MROH6A6NGR9 719 aa17.44■□□□□ 0.38
RPAIN-208ENST00000571043 GOLGA8TH3BQL2 631 aa17.44■□□□□ 0.38
RPAIN-208ENST00000571043 LEFTY2O00292 366 aa17.44■□□□□ 0.38
RPAIN-208ENST00000571043 PRAMEF12O95522 483 aa17.44■□□□□ 0.38
RPAIN-208ENST00000571043 GSRP00390 522 aa17.44■□□□□ 0.38
RPAIN-208ENST00000571043 PROCP04070 461 aa17.44■□□□□ 0.38
RPAIN-208ENST00000571043 LAMP2P13473 410 aa17.44■□□□□ 0.38
RPAIN-208ENST00000571043 TMPRSS15P98073 1019 aa17.44■□□□□ 0.38
RPAIN-208ENST00000571043 LEXMQ3ZCV2 418 aa17.44■□□□□ 0.38
RPAIN-208ENST00000571043 PPM1JQ5JR12 505 aa17.44■□□□□ 0.38
RPAIN-208ENST00000571043 FAM78AQ5JUQ0 283 aa17.44■□□□□ 0.38
RPAIN-208ENST00000571043 CXorf57Q6NSI4 855 aaKnown RBP17.44■□□□□ 0.38
RPAIN-208ENST00000571043 CMC1Q7Z7K0 106 aa17.44■□□□□ 0.38
RPAIN-208ENST00000571043 CLEC14AQ86T13 490 aa17.44■□□□□ 0.38
RPAIN-208ENST00000571043 SMARCD2Q92925 531 aa17.44■□□□□ 0.38
RPAIN-208ENST00000571043 RMDN2Q96LZ7 410 aa17.44■□□□□ 0.38
RPAIN-208ENST00000571043 MYADMQ96S97 322 aa17.44■□□□□ 0.38
RPAIN-208ENST00000571043 LSM7Q9UK45 103 aaKnown RBP17.44■□□□□ 0.38
RPAIN-208ENST00000571043 RIMKLBQ9ULI2 386 aa17.44■□□□□ 0.38
RPAIN-208ENST00000571043 SLC12A4Q9UP95 1085 aa17.44■□□□□ 0.38
RPAIN-208ENST00000571043 ANKRD6Q9Y2G4 727 aa17.44■□□□□ 0.38
RPAIN-208ENST00000571043 ZNF510Q9Y2H8 683 aa17.44■□□□□ 0.38
RPAIN-208ENST00000571043 MYOFQ9NZM1 2061 aa17.44■□□□□ 0.38
RPAIN-208ENST00000571043 DOCK4Q8N1I0 1966 aa17.43■□□□□ 0.38
RPAIN-208ENST00000571043 A0A096LPK6 155 aa17.43■□□□□ 0.38
RPAIN-208ENST00000571043 TYW5A2RUC4 315 aaKnown RBP17.43■□□□□ 0.38
RPAIN-208ENST00000571043 SLC7A4O43246 635 aa17.43■□□□□ 0.38
RPAIN-208ENST00000571043 DCTN3O75935 186 aa17.43■□□□□ 0.38
RPAIN-208ENST00000571043 AHSGP02765 367 aa17.43■□□□□ 0.38
RPAIN-208ENST00000571043 GABRB3P28472 473 aa17.43■□□□□ 0.38
RPAIN-208ENST00000571043 SCTRP47872 440 aa17.43■□□□□ 0.38
RPAIN-208ENST00000571043 ILF2Q12905 390 aaKnown RBP17.43■□□□□ 0.38
RPAIN-208ENST00000571043 GRM3Q14832 879 aa17.43■□□□□ 0.38
RPAIN-208ENST00000571043 CHI3L2Q15782 390 aa17.43■□□□□ 0.38
RPAIN-208ENST00000571043 FASTKD1Q53R41 847 aaKnown RBP17.43■□□□□ 0.38
RPAIN-208ENST00000571043 RNF219Q5W0B1 726 aaPredicted RBP17.43■□□□□ 0.38
RPAIN-208ENST00000571043 NEPROQ6NW34 567 aa17.43■□□□□ 0.38
RPAIN-208ENST00000571043 C16orf46Q6P387 395 aa17.43■□□□□ 0.38
RPAIN-208ENST00000571043 HTR3DQ70Z44 454 aa17.43■□□□□ 0.38
RPAIN-208ENST00000571043 GALNT7Q86SF2 657 aa17.43■□□□□ 0.38
RPAIN-208ENST00000571043 LMNTD2Q8IXW0 634 aa17.43■□□□□ 0.38
RPAIN-208ENST00000571043 CELF5Q8N6W0 485 aaKnown RBP17.43■□□□□ 0.38
RPAIN-208ENST00000571043 SH3RF2Q8TEC5 729 aa17.43■□□□□ 0.38
RPAIN-208ENST00000571043 ATXN7L3BQ96GX2 97 aa17.43■□□□□ 0.38
RPAIN-208ENST00000571043 MECRQ9BV79 373 aa17.43■□□□□ 0.38
RPAIN-208ENST00000571043 ARIH1Q9Y4X5 557 aaPredicted RBP17.43■□□□□ 0.38
RPAIN-208ENST00000571043 E2F8A0AVK6 867 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 TTC24A2A3L6 582 aaPredicted RBP17.42■□□□□ 0.38
RPAIN-208ENST00000571043 TBL1XO60907 577 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 NDST3O95803 873 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 TOP3BO95985 862 aaKnown RBP17.42■□□□□ 0.38
RPAIN-208ENST00000571043 PRKCGP05129 697 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 C2P06681 752 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 CR2P20023 1033 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 CD151P48509 253 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 LIG3P49916 1009 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 BST1Q10588 318 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms