RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 DDTLA6NHG4 134 aaPredicted RBP4.37□□□□□ -1.71
NUP88-202ENST00000570937 AGAP5A6NIR3 686 aa4.37□□□□□ -1.71
NUP88-202ENST00000570937 CXCL11O14625 94 aa4.37□□□□□ -1.71
NUP88-202ENST00000570937 RNF113AO15541 343 aaKnown RBP4.37□□□□□ -1.71
NUP88-202ENST00000570937 NEURL1O76050 574 aa4.37□□□□□ -1.71
NUP88-202ENST00000570937 SYF2O95926 243 aaKnown RBP4.37□□□□□ -1.71
NUP88-202ENST00000570937 ASNSP08243 561 aa4.37□□□□□ -1.71
NUP88-202ENST00000570937 CHRNB1P11230 501 aa4.37□□□□□ -1.71
NUP88-202ENST00000570937 ADD2P35612 726 aa4.37□□□□□ -1.71
NUP88-202ENST00000570937 STAT1P42224 750 aa4.37□□□□□ -1.71
NUP88-202ENST00000570937 PCP4P48539 62 aa4.37□□□□□ -1.71
NUP88-202ENST00000570937 POLD2P49005 469 aa4.37□□□□□ -1.71
NUP88-202ENST00000570937 RHAGQ02094 409 aa4.37□□□□□ -1.71
NUP88-202ENST00000570937 NUCB1Q02818 461 aa4.37□□□□□ -1.71
NUP88-202ENST00000570937 PPIL2Q13356 520 aa4.37□□□□□ -1.71
NUP88-202ENST00000570937 FHL1Q13642 323 aa4.37□□□□□ -1.71
NUP88-202ENST00000570937 SEMA3AQ14563 771 aa4.37□□□□□ -1.71
NUP88-202ENST00000570937 VWA5B1Q5TIE3 1220 aa4.37□□□□□ -1.71
NUP88-202ENST00000570937 DGAT2L7PQ6IED9 249 aa4.37□□□□□ -1.71
NUP88-202ENST00000570937 TRAPPC11Q7Z392 1133 aa4.37□□□□□ -1.71
NUP88-202ENST00000570937 KDELC2Q7Z4H8 507 aa4.37□□□□□ -1.71
NUP88-202ENST00000570937 ADGRA1Q86SQ6 560 aa4.37□□□□□ -1.71
NUP88-202ENST00000570937 CHD1LQ86WJ1 897 aa4.37□□□□□ -1.71
NUP88-202ENST00000570937 ZDHHC17Q8IUH5 632 aa4.37□□□□□ -1.71
NUP88-202ENST00000570937 CCDC117Q8IWD4 279 aaPredicted RBP4.37□□□□□ -1.71
NUP88-202ENST00000570937 SMC5Q8IY18 1101 aa4.37□□□□□ -1.71
NUP88-202ENST00000570937 SAMD14Q8IZD0 417 aaPredicted RBP4.37□□□□□ -1.71
NUP88-202ENST00000570937 PELI3Q8N2H9 469 aa4.37□□□□□ -1.71
NUP88-202ENST00000570937 KBTBD3Q8NAB2 608 aa4.37□□□□□ -1.71
NUP88-202ENST00000570937 EVI5LQ96CN4 794 aa4.37□□□□□ -1.71
NUP88-202ENST00000570937 MPHOSPH6Q99547 160 aaKnown RBP4.37□□□□□ -1.71
NUP88-202ENST00000570937 FSD1Q9BTV5 496 aa4.37□□□□□ -1.71
NUP88-202ENST00000570937 TASP1Q9H6P5 420 aa4.37□□□□□ -1.71
NUP88-202ENST00000570937 AAMDCQ9H7C9 122 aa4.37□□□□□ -1.71
NUP88-202ENST00000570937 SLC22A11Q9NSA0 550 aa4.37□□□□□ -1.71
NUP88-202ENST00000570937 TMLHEQ9NVH6 421 aa4.37□□□□□ -1.71
NUP88-202ENST00000570937 MCM9Q9NXL9 1143 aa4.37□□□□□ -1.71
NUP88-202ENST00000570937 ZHX2Q9Y6X8 837 aa4.37□□□□□ -1.71
NUP88-202ENST00000570937 FLT1P17948 1338 aa4.37□□□□□ -1.71
NUP88-202ENST00000570937 COL2A1P02458 1487 aaPredicted RBP4.37□□□□□ -1.71
NUP88-202ENST00000570937 MYH13Q9UKX3 1938 aa4.36□□□□□ -1.71
NUP88-202ENST00000570937 CCL15-CCL14A0A0B4J2E2 113 aa4.36□□□□□ -1.71
NUP88-202ENST00000570937 CXorf65A6NEN9 183 aa4.36□□□□□ -1.71
NUP88-202ENST00000570937 GAGE12JA6NER3 117 aa4.36□□□□□ -1.71
NUP88-202ENST00000570937 HIP1O00291 1037 aa4.36□□□□□ -1.71
NUP88-202ENST00000570937 MDM4O15151 490 aa4.36□□□□□ -1.71
NUP88-202ENST00000570937 SPTLC2O15270 562 aa4.36□□□□□ -1.71
NUP88-202ENST00000570937 MSI1O43347 362 aaKnown RBP4.36□□□□□ -1.71
NUP88-202ENST00000570937 HNRNPRO43390 633 aaKnown RBP4.36□□□□□ -1.71
NUP88-202ENST00000570937 MBD4O95243 580 aa4.36□□□□□ -1.71
NUP88-202ENST00000570937 CENPBP07199 599 aaPredicted RBP4.36□□□□□ -1.71
NUP88-202ENST00000570937 SNHG28P0DPA3 235 aa4.36□□□□□ -1.71
NUP88-202ENST00000570937 HSPA8P11142 646 aaKnown RBP4.36□□□□□ -1.71
NUP88-202ENST00000570937 HOXB9P17482 250 aaPredicted RBP4.36□□□□□ -1.71
NUP88-202ENST00000570937 SERPINA4P29622 427 aa4.36□□□□□ -1.71
NUP88-202ENST00000570937 DYNLL1P63167 89 aaKnown RBP4.36□□□□□ -1.71
NUP88-202ENST00000570937 RAPGEF1Q13905 1077 aa4.36□□□□□ -1.71
NUP88-202ENST00000570937 GALNT3Q14435 633 aa4.36□□□□□ -1.71
NUP88-202ENST00000570937 RPS6KA2Q15349 733 aa4.36□□□□□ -1.71
NUP88-202ENST00000570937 PKN2Q16513 984 aaKnown RBP4.36□□□□□ -1.71
NUP88-202ENST00000570937 CCL15Q16663 113 aa4.36□□□□□ -1.71
NUP88-202ENST00000570937 PRTGQ2VWP7 1150 aa4.36□□□□□ -1.71
NUP88-202ENST00000570937 CCDC38Q502W7 563 aa4.36□□□□□ -1.71
NUP88-202ENST00000570937 DAB2IPQ5VWQ8 1189 aa4.36□□□□□ -1.71
NUP88-202ENST00000570937 KLBQ86Z14 1044 aa4.36□□□□□ -1.71
NUP88-202ENST00000570937 TMEM174Q8WUU8 243 aa4.36□□□□□ -1.71
NUP88-202ENST00000570937 CAMK1GQ96NX5 476 aa4.36□□□□□ -1.71
NUP88-202ENST00000570937 PIGSQ96S52 555 aa4.36□□□□□ -1.71
NUP88-202ENST00000570937 RIOK1Q9BRS2 568 aaKnown RBP4.36□□□□□ -1.71
NUP88-202ENST00000570937 BRD8Q9H0E9 1235 aa4.36□□□□□ -1.71
NUP88-202ENST00000570937 PDE11AQ9HCR9 933 aa4.36□□□□□ -1.71
NUP88-202ENST00000570937 DDX4Q9NQI0 724 aaKnown RBP4.36□□□□□ -1.71
NUP88-202ENST00000570937 RNF146Q9NTX7 359 aa4.36□□□□□ -1.71
NUP88-202ENST00000570937 SWAP70Q9UH65 585 aa4.36□□□□□ -1.71
NUP88-202ENST00000570937 ANAPC4Q9UJX5 808 aa4.36□□□□□ -1.71
NUP88-202ENST00000570937 SLC4A4Q9Y6R1 1079 aa4.36□□□□□ -1.71
NUP88-202ENST00000570937 ZNF646O15015 1829 aaPredicted RBP4.36□□□□□ -1.71
NUP88-202ENST00000570937 ECM29Q5VYK3 1845 aa4.36□□□□□ -1.71
NUP88-202ENST00000570937 SSC5DA1L4H1 1573 aa4.36□□□□□ -1.71
NUP88-202ENST00000570937 MYH2Q9UKX2 1941 aa4.35□□□□□ -1.71
NUP88-202ENST00000570937 FAM90A20PA6NIJ5 464 aa4.35□□□□□ -1.71
NUP88-202ENST00000570937 FAM90A8PA6NJQ4 464 aa4.35□□□□□ -1.71
NUP88-202ENST00000570937 C19orf81C9J6K1 198 aa4.35□□□□□ -1.71
NUP88-202ENST00000570937 PDHXO00330 501 aa4.35□□□□□ -1.71
NUP88-202ENST00000570937 IGHDP01880 384 aa4.35□□□□□ -1.71
NUP88-202ENST00000570937 KLKB1P03952 638 aa4.35□□□□□ -1.71
NUP88-202ENST00000570937 CYP21A2P08686 494 aa4.35□□□□□ -1.71
NUP88-202ENST00000570937 FAM90A13PP0C7W8 464 aa4.35□□□□□ -1.71
NUP88-202ENST00000570937 FAM90A24PP0C7X0 464 aa4.35□□□□□ -1.71
NUP88-202ENST00000570937 HOXB2P14652 356 aa4.35□□□□□ -1.71
NUP88-202ENST00000570937 PRPH2P23942 346 aa4.35□□□□□ -1.71
NUP88-202ENST00000570937 CST5P28325 142 aaPredicted RBP4.35□□□□□ -1.71
NUP88-202ENST00000570937 TDO2P48775 406 aa4.35□□□□□ -1.71
NUP88-202ENST00000570937 THBS3P49746 956 aa4.35□□□□□ -1.71
NUP88-202ENST00000570937 OAZ1P54368 228 aa4.35□□□□□ -1.71
NUP88-202ENST00000570937 GAD2Q05329 585 aa4.35□□□□□ -1.71
NUP88-202ENST00000570937 PMPCAQ10713 525 aa4.35□□□□□ -1.71
NUP88-202ENST00000570937 SPP2Q13103 211 aa4.35□□□□□ -1.71
NUP88-202ENST00000570937 PTGR1Q14914 329 aa4.35□□□□□ -1.71
NUP88-202ENST00000570937 PLK5Q496M5 336 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms