RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 PDCL3Q9H2J4 239 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 CEP72Q9P209 647 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 GABRQQ9UN88 632 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 CDYLQ9Y232 598 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 DNAJC16Q9Y2G8 782 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 ADGRA3Q8IWK6 1321 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 CNTNAP2Q9UHC6 1331 aa7.4□□□□□ -1.22
CNOT1-222ENST00000570139 DOCK3Q8IZD9 2030 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 A0A0U1RQG5 324 aaPredicted RBP7.39□□□□□ -1.23
CNOT1-222ENST00000570139 GOLGA6L9A6NEM1 432 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 ZNF233A6NK53 670 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 CD3EAPO15446 510 aaKnown RBP7.39□□□□□ -1.23
CNOT1-222ENST00000570139 CLDN3O15551 220 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 ZC3H11AO75152 810 aaKnown RBP eCLIP7.39□□□□□ -1.23
CNOT1-222ENST00000570139 SCGB1D1O95968 90 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 PLA2G1BP04054 148 aaKnown RBP7.39□□□□□ -1.23
CNOT1-222ENST00000570139 TUBB4AP04350 444 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 CCDC172P0C7W6 258 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 SKILP12757 684 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 CAPN2P17655 700 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 SLC6A2P23975 617 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 ANXA13P27216 316 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 AXLP30530 894 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 KRT20P35900 424 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 FMO5P49326 533 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 VAMP7P51809 220 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 LILRA4P59901 499 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 DLG4P78352 724 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 PRPF4BQ13523 1007 aaKnown RBP7.39□□□□□ -1.23
CNOT1-222ENST00000570139 SYCP1Q15431 976 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 EXOC3L4Q17RC7 722 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 FAM214AQ32MH5 1076 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 PRAMEF19Q5SWL8 479 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 TMEM63BQ5T3F8 832 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 DRICH1Q6PGQ1 229 aaPredicted RBP7.39□□□□□ -1.23
CNOT1-222ENST00000570139 B4GALNT4Q76KP1 1039 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 LRRC8DQ7L1W4 858 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 SYT13Q7L8C5 426 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 CACNA2D4Q7Z3S7 1137 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 XYLT1Q86Y38 959 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 ZNF280BQ86YH2 543 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 LRRC71Q8N4P6 559 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 TC2NQ8N9U0 490 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 PSD4Q8NDX1 1056 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 TRPV1Q8NER1 839 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 OR8K1Q8NGG5 319 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 CACTINQ8WUQ7 758 aaKnown RBP7.39□□□□□ -1.23
CNOT1-222ENST00000570139 HMGB4Q8WW32 186 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 SYN2Q92777 582 aaPredicted RBP7.39□□□□□ -1.23
CNOT1-222ENST00000570139 KAT2BQ92831 832 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 PPP2R3CQ969Q6 453 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 NLRP4Q96MN2 994 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 BAG1Q99933 345 aaPredicted RBP7.39□□□□□ -1.23
CNOT1-222ENST00000570139 CBWD1Q9BRT8 395 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 MSTO1Q9BUK6 570 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 KIFC3Q9BVG8 833 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 GCOM2Q9BZD3 368 aaPredicted RBP7.39□□□□□ -1.23
CNOT1-222ENST00000570139 FZD8Q9H461 694 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 NSUN3Q9H649 340 aaKnown RBP7.39□□□□□ -1.23
CNOT1-222ENST00000570139 GOLGA2P5Q9HBQ8 144 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 POLD4Q9HCU8 107 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 ABHD10Q9NUJ1 306 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 AGO2Q9UKV8 859 aaKnown RBP7.39□□□□□ -1.23
CNOT1-222ENST00000570139 TNFSF13BQ9Y275 285 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 KAT6AQ92794 2004 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 SCN10AQ9Y5Y9 1956 aa7.39□□□□□ -1.23
CNOT1-222ENST00000570139 RALGAPA2Q2PPJ7 1873 aa7.38□□□□□ -1.23
CNOT1-222ENST00000570139 INO80B-WBP1J3KQ70 363 aa7.38□□□□□ -1.23
CNOT1-222ENST00000570139 M0QZ92 97 aa7.38□□□□□ -1.23
CNOT1-222ENST00000570139 OGTO15294 1046 aa7.38□□□□□ -1.23
CNOT1-222ENST00000570139 ZSCAN12O43309 604 aa7.38□□□□□ -1.23
CNOT1-222ENST00000570139 ERLIN2O94905 339 aa7.38□□□□□ -1.23
CNOT1-222ENST00000570139 CSF1P09603 554 aa7.38□□□□□ -1.23
CNOT1-222ENST00000570139 MCF2P10911 925 aa7.38□□□□□ -1.23
CNOT1-222ENST00000570139 PROZP22891 400 aa7.38□□□□□ -1.23
CNOT1-222ENST00000570139 ADSSP30520 456 aa7.38□□□□□ -1.23
CNOT1-222ENST00000570139 PRKAR1BP31321 381 aa7.38□□□□□ -1.23
CNOT1-222ENST00000570139 HNRNPH3P31942 346 aaKnown RBP7.38□□□□□ -1.23
CNOT1-222ENST00000570139 CASP14P31944 242 aa7.38□□□□□ -1.23
CNOT1-222ENST00000570139 PGM1P36871 562 aa7.38□□□□□ -1.23
CNOT1-222ENST00000570139 MATR3P43243 847 aaKnown RBP eCLIP7.38□□□□□ -1.23
CNOT1-222ENST00000570139 KCNC1P48547 511 aa7.38□□□□□ -1.23
CNOT1-222ENST00000570139 MXI1P50539 228 aa7.38□□□□□ -1.23
CNOT1-222ENST00000570139 GPC3P51654 580 aa7.38□□□□□ -1.23
CNOT1-222ENST00000570139 CLCN3P51790 818 aa7.38□□□□□ -1.23
CNOT1-222ENST00000570139 SOX10P56693 466 aa7.38□□□□□ -1.23
CNOT1-222ENST00000570139 ADAM17P78536 824 aa7.38□□□□□ -1.23
CNOT1-222ENST00000570139 CCZ1BP86790 482 aa7.38□□□□□ -1.23
CNOT1-222ENST00000570139 CCZ1P86791 482 aaPredicted RBP7.38□□□□□ -1.23
CNOT1-222ENST00000570139 MYL7Q01449 175 aa7.38□□□□□ -1.23
CNOT1-222ENST00000570139 MBTD1Q05BQ5 628 aa7.38□□□□□ -1.23
CNOT1-222ENST00000570139 CYP24A1Q07973 514 aa7.38□□□□□ -1.23
CNOT1-222ENST00000570139 PSMD6Q15008 389 aa7.38□□□□□ -1.23
CNOT1-222ENST00000570139 DCAF4L1Q3SXM0 396 aa7.38□□□□□ -1.23
CNOT1-222ENST00000570139 ZIK1Q3SY52 487 aaPredicted RBP7.38□□□□□ -1.23
CNOT1-222ENST00000570139 GALNTL6Q49A17 601 aa7.38□□□□□ -1.23
CNOT1-222ENST00000570139 MARCH8Q5T0T0 291 aa7.38□□□□□ -1.23
CNOT1-222ENST00000570139 CERCAMQ5T4B2 595 aa7.38□□□□□ -1.23
CNOT1-222ENST00000570139 CFAP58Q5T655 872 aa7.38□□□□□ -1.23
CNOT1-222ENST00000570139 MFSD4BQ5TF39 518 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms