RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 PPIDQ08752 370 aaKnown RBP9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 NSUN2Q08J23 767 aaKnown RBP eCLIP9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 KIF5AQ12840 1032 aa9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 PRKD1Q15139 912 aaPredicted RBP9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 IFI16Q16666 785 aaKnown RBP9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 TMEM52BQ4KMG9 183 aa9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 DENND2CQ68D51 928 aa9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 NAPEPLDQ6IQ20 393 aa9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 Q6ZSR6 202 aa9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 HSD11B1LQ7Z5J1 315 aa9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 PIP4P1Q86T03 277 aa9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 GPR161Q8N6U8 529 aaKnown RBP9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 EXD1Q8NHP7 514 aa9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 CEP76Q8TAP6 659 aa9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 NETO1Q8TDF5 533 aa9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 PTCD2Q8WV60 388 aaKnown RBP9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 CENPTQ96BT3 561 aa9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 FEM1CQ96JP0 617 aa9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 RBM15Q96T37 977 aaKnown RBP eCLIP9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 GORASP1Q9BQQ3 440 aa9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 ANP32EQ9BTT0 268 aa9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 PCED1AQ9H1Q7 454 aa9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 UCKL1Q9NWZ5 548 aa9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 DKK3Q9UBP4 350 aa9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 B4GALT6Q9UBX8 382 aa9.88□□□□□ -0.83
GTF3C1-212ENST00000570129 NPIPB15A6NHN6 443 aaPredicted RBP9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 USP27XA6NNY8 438 aa9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 PRR5-ARHGAP8B1AHC4 643 aa9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 AP1G1O43747 822 aa9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 FZD6O60353 706 aa9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 PGLSO95336 258 aa9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 MT-CYBP00156 380 aaPredicted RBP9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 C6P13671 934 aa9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 SPINK2P20155 84 aa9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 RBL1P28749 1068 aa9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 SERPINB6P35237 376 aa9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 HNF1BP35680 557 aa9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 MMP12P39900 470 aa9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 CLDN6P56747 220 aa9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 GSDMDP57764 484 aa9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 RPS21P63220 83 aaKnown RBP9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 ARHGAP8P85298 464 aa9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 OTUD4Q01804 1114 aaKnown RBP9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 HNRNPDQ14103 355 aaKnown RBP9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 RFTN1Q14699 578 aaPredicted RBP9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 PPM1JQ5JR12 505 aa9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 N4BP2L1Q5TBK1 243 aaPredicted RBP9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 PSAPL1Q6NUJ1 521 aa9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 LIPIQ6XZB0 460 aa9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 BBS12Q6ZW61 710 aa9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 PEX26Q7Z412 305 aa9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 REXO1L1PQ8IX06 675 aa9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 CBARPQ8N350 705 aaPredicted RBP9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 TAB3Q8N5C8 712 aaPredicted RBP9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 PNPLA1Q8N8W4 532 aa9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 TP53I13Q8NBR0 393 aaPredicted RBP9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 ACTL9Q8TC94 416 aa9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 EID2BQ96D98 161 aa9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 HDAC11Q96DB2 347 aa9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 PPP1R16AQ96I34 528 aa9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 ZNF641Q96N77 438 aaPredicted RBP9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 OSBPL1AQ9BXW6 950 aa9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 OSBPL8Q9BZF1 889 aa9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 KDM4CQ9H3R0 1056 aa9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 ATP13A3Q9H7F0 1226 aa9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 DNAAF2Q9NVR5 837 aaKnown RBP9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 AMFRQ9UKV5 643 aa9.87□□□□□ -0.83
GTF3C1-212ENST00000570129 SHROOM3Q8TF72 1996 aa9.86□□□□□ -0.83
GTF3C1-212ENST00000570129 AKAP13Q12802 2813 aa9.86□□□□□ -0.83
GTF3C1-212ENST00000570129 SPEGQ15772 3267 aa9.86□□□□□ -0.83
GTF3C1-212ENST00000570129 ZNF487B1APH4 448 aa9.86□□□□□ -0.83
GTF3C1-212ENST00000570129 PRAMEF26H0Y7S4 382 aa9.86□□□□□ -0.83
GTF3C1-212ENST00000570129 TSPAN6O43657 245 aa9.86□□□□□ -0.83
GTF3C1-212ENST00000570129 RECQL5O94762 991 aaPredicted RBP9.86□□□□□ -0.83
GTF3C1-212ENST00000570129 KCNK5O95279 499 aa9.86□□□□□ -0.83
GTF3C1-212ENST00000570129 FUCA1P04066 466 aa9.86□□□□□ -0.83
GTF3C1-212ENST00000570129 CELA2BP08218 269 aaPredicted RBP9.86□□□□□ -0.83
GTF3C1-212ENST00000570129 THEGLP0DJG4 465 aa9.86□□□□□ -0.83
GTF3C1-212ENST00000570129 SERPINA4P29622 427 aa9.86□□□□□ -0.83
GTF3C1-212ENST00000570129 CA5AP35218 305 aa9.86□□□□□ -0.83
GTF3C1-212ENST00000570129 HOXD12P35452 270 aa9.86□□□□□ -0.83
GTF3C1-212ENST00000570129 CHRNA4P43681 627 aa9.86□□□□□ -0.83
GTF3C1-212ENST00000570129 GRIA4P48058 902 aa9.86□□□□□ -0.83
GTF3C1-212ENST00000570129 LIMK1P53667 647 aa9.86□□□□□ -0.83
GTF3C1-212ENST00000570129 C21orf59P57076 290 aa9.86□□□□□ -0.83
GTF3C1-212ENST00000570129 AP1S1P61966 158 aa9.86□□□□□ -0.83
GTF3C1-212ENST00000570129 IFI35P80217 286 aaPredicted RBP9.86□□□□□ -0.83
GTF3C1-212ENST00000570129 RAD51Q06609 339 aa9.86□□□□□ -0.83
GTF3C1-212ENST00000570129 SFSWAPQ12872 951 aaKnown RBP9.86□□□□□ -0.83
GTF3C1-212ENST00000570129 EIF2B5Q13144 721 aaKnown RBP9.86□□□□□ -0.83
GTF3C1-212ENST00000570129 SGCGQ13326 291 aa9.86□□□□□ -0.83
GTF3C1-212ENST00000570129 FZD2Q14332 565 aa9.86□□□□□ -0.83
GTF3C1-212ENST00000570129 GALNT3Q14435 633 aa9.86□□□□□ -0.83
GTF3C1-212ENST00000570129 PUM1Q14671 1186 aaKnown RBP eCLIP9.86□□□□□ -0.83
GTF3C1-212ENST00000570129 STAT4Q14765 748 aa9.86□□□□□ -0.83
GTF3C1-212ENST00000570129 IRF4Q15306 451 aa9.86□□□□□ -0.83
GTF3C1-212ENST00000570129 CNGA3Q16281 694 aa9.86□□□□□ -0.83
GTF3C1-212ENST00000570129 PCSK7Q16549 785 aa9.86□□□□□ -0.83
GTF3C1-212ENST00000570129 CDKN3Q16667 212 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms