RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 MARK1Q9P0L2 795 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 SLCO3A1Q9UIG8 710 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 PRUNE2Q8WUY3 3088 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 A6NNZ2 444 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 BNIP3LO60238 219 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 FCARP24071 287 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 FOXN2P32314 431 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 DLG2Q15700 870 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 GEN1Q17RS7 908 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 TUBB8Q3ZCM7 444 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 PPM1JQ5JR12 505 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 GRTP1Q5TC63 336 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 ANKRD54Q6NXT1 300 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 CNTN4Q8IWV2 1026 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 OSCP1Q8WVF1 389 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 SPOCK2Q92563 424 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 HDAC10Q969S8 669 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 OTUB2Q96DC9 234 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 SRPK1Q96SB4 655 aaKnown RBP11□□□□□ -0.65
PDXDC1-216ENST00000569715 EBF3Q9H4W6 596 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 PCDHB9Q9Y5E1 797 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 AHSGP02765 367 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 CES1P23141 567 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 CNTFP26441 200 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 SLC18A1P54219 525 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 DLX2Q07687 328 aaPredicted RBP10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 SLC12A1Q13621 1099 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 QPCTQ16769 361 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 ZNF789Q5FWF6 425 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 FOXR1Q6PIV2 292 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 TIFABQ6ZNK6 161 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 LDB1Q86U70 411 aaPredicted RBP10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 NDUFAF2Q8N183 169 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 EFHBQ8N7U6 833 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 BRSK1Q8TDC3 778 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 CKAP2Q8WWK9 683 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 SGSM3Q96HU1 749 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 VPS39Q96JC1 886 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 TBATAQ96M53 351 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 FAM111AQ96PZ2 611 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 CCDC134Q9H6E4 229 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 HS3ST2Q9Y278 367 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 GMNCA6NCL1 334 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 FZD6O60353 706 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 ALADP13716 330 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 PAMP19021 973 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 PDE1BQ01064 536 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 PDE1CQ14123 709 aaPredicted RBP10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 C22orf39Q6P5X5 142 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 PTAR1Q7Z6K3 402 aaPredicted RBP10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 ZC3HC1Q86WB0 502 aaKnown RBP10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 MFSD6LQ8IWD5 586 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 CYB5D2Q8WUJ1 264 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 PTPRN2Q92932 1015 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 ALKBH8Q96BT7 664 aaKnown RBP10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 MARCH4Q9P2E8 410 aaPredicted RBP10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 ARIH1Q9Y4X5 557 aaPredicted RBP10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 HEPACAM2A8MVW5 462 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 ANKRD66B4E2M5 251 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 COPEO14579 308 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 SLC9A3R1O14745 358 aaPredicted RBP10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 ZWINTO95229 277 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 PAPSS2O95340 614 aaPredicted RBP10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 ADH5P11766 374 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 ABL2P42684 1182 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 AP1S1P61966 158 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 GRM3Q14832 879 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 NEPROQ6NW34 567 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 TMEM184AQ6ZMB5 413 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 LRRC34Q8IZ02 419 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 RYBPQ8N488 228 aaPredicted RBP10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 BPIFB1Q8TDL5 484 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 PPP2R3CQ969Q6 453 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 CCT8L2Q96SF2 557 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 FBXO6Q9NRD1 293 aaPredicted RBP10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 SNX15Q9NRS6 342 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 CLEC1BQ9P126 229 aa10.99□□□□□ -0.65
PDXDC1-216ENST00000569715 SIN3BO75182 1162 aa10.98□□□□□ -0.65
PDXDC1-216ENST00000569715 PRSS56P0CW18 603 aa10.98□□□□□ -0.65
PDXDC1-216ENST00000569715 CTPS1P17812 591 aa10.98□□□□□ -0.65
PDXDC1-216ENST00000569715 SPRP35270 261 aaPredicted RBP10.98□□□□□ -0.65
PDXDC1-216ENST00000569715 ETV4P43268 484 aa10.98□□□□□ -0.65
PDXDC1-216ENST00000569715 ZNF140P52738 457 aaPredicted RBP10.98□□□□□ -0.65
PDXDC1-216ENST00000569715 SF3A3Q12874 501 aaKnown RBP eCLIP10.98□□□□□ -0.651e-6■■■■□ 19.7
PDXDC1-216ENST00000569715 THOC5Q13769 683 aaKnown RBP10.98□□□□□ -0.65
PDXDC1-216ENST00000569715 MBLAC2Q68D91 279 aa10.98□□□□□ -0.65
PDXDC1-216ENST00000569715 TANGO2Q6ICL3 276 aa10.98□□□□□ -0.65
PDXDC1-216ENST00000569715 ZSWIM9Q86XI8 627 aa10.98□□□□□ -0.65
PDXDC1-216ENST00000569715 OR6P1Q8NGX9 317 aa10.98□□□□□ -0.65
PDXDC1-216ENST00000569715 MYO19Q96H55 970 aa10.98□□□□□ -0.65
PDXDC1-216ENST00000569715 WDR91A4D1P6 747 aa10.98□□□□□ -0.65
PDXDC1-216ENST00000569715 TCP11X1B4DZS4 312 aa10.98□□□□□ -0.65
PDXDC1-216ENST00000569715 TRAFD1O14545 582 aaPredicted RBP10.98□□□□□ -0.65
PDXDC1-216ENST00000569715 TBX10O75333 385 aa10.98□□□□□ -0.65
PDXDC1-216ENST00000569715 ALPIP09923 528 aa10.98□□□□□ -0.65
PDXDC1-216ENST00000569715 BMP8BP34820 402 aa10.98□□□□□ -0.65
PDXDC1-216ENST00000569715 CSE1LP55060 971 aaKnown RBP10.98□□□□□ -0.65
PDXDC1-216ENST00000569715 ECT2LQ008S8 904 aa10.98□□□□□ -0.65
PDXDC1-216ENST00000569715 ACVR1Q04771 509 aa10.98□□□□□ -0.65
PDXDC1-216ENST00000569715 GAB4Q2WGN9 574 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms