RNA–Protein interactions for RNA: ENST00000568881.1

NEIL1-220, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-220ENST00000568881 PDFQ9HBH1 243 aa13.9□□□□□ -0.18
NEIL1-220ENST00000568881 SAE1Q9UBE0 346 aaPredicted RBP13.9□□□□□ -0.18
NEIL1-220ENST00000568881 DKK3Q9UBP4 350 aa13.9□□□□□ -0.18
NEIL1-220ENST00000568881 SEPT3Q9UH03 358 aa13.9□□□□□ -0.18
NEIL1-220ENST00000568881 ANGPTL2Q9UKU9 493 aa13.9□□□□□ -0.18
NEIL1-220ENST00000568881 FADS3Q9Y5Q0 445 aa13.9□□□□□ -0.18
NEIL1-220ENST00000568881 A0A1W2PR77 199 aa13.89□□□□□ -0.19
NEIL1-220ENST00000568881 C10orf142B7Z368 130 aa13.89□□□□□ -0.19
NEIL1-220ENST00000568881 MATN3O15232 486 aa13.89□□□□□ -0.19
NEIL1-220ENST00000568881 SH3BP5O60239 455 aa13.89□□□□□ -0.19
NEIL1-220ENST00000568881 CEP104O60308 925 aa13.89□□□□□ -0.19
NEIL1-220ENST00000568881 PCDHGA12O60330 932 aa13.89□□□□□ -0.19
NEIL1-220ENST00000568881 NEBLO76041 1014 aa13.89□□□□□ -0.19
NEIL1-220ENST00000568881 PECAM1P16284 738 aaPredicted RBP13.89□□□□□ -0.19
NEIL1-220ENST00000568881 CSNK1DP48730 415 aa13.89□□□□□ -0.19
NEIL1-220ENST00000568881 POLR2LP62875 67 aaKnown RBP13.89□□□□□ -0.19
NEIL1-220ENST00000568881 BNC1Q01954 994 aa13.89□□□□□ -0.19
NEIL1-220ENST00000568881 PPIDQ08752 370 aaKnown RBP13.89□□□□□ -0.19
NEIL1-220ENST00000568881 NSUN2Q08J23 767 aaKnown RBP eCLIP13.89□□□□□ -0.19
NEIL1-220ENST00000568881 AP1B1Q10567 949 aa13.89□□□□□ -0.19
NEIL1-220ENST00000568881 LBRQ14739 615 aaKnown RBP13.89□□□□□ -0.19
NEIL1-220ENST00000568881 TRIP6Q15654 476 aaKnown RBP13.89□□□□□ -0.19
NEIL1-220ENST00000568881 MARC1Q5VT66 337 aa13.89□□□□□ -0.19
NEIL1-220ENST00000568881 ERAP2Q6P179 960 aa13.89□□□□□ -0.19
NEIL1-220ENST00000568881 BRAT1Q6PJG6 821 aa13.89□□□□□ -0.19
NEIL1-220ENST00000568881 CCDC13Q8IYE1 715 aa13.89□□□□□ -0.19
NEIL1-220ENST00000568881 CXorf40AQ8TE69 158 aa13.89□□□□□ -0.19
NEIL1-220ENST00000568881 RHBDD1Q8TEB9 315 aa13.89□□□□□ -0.19
NEIL1-220ENST00000568881 TFB1MQ8WVM0 346 aaKnown RBP13.89□□□□□ -0.19
NEIL1-220ENST00000568881 MAIP1Q8WWC4 291 aa13.89□□□□□ -0.19
NEIL1-220ENST00000568881 FATE1Q969F0 183 aa13.89□□□□□ -0.19
NEIL1-220ENST00000568881 HAUS1Q96CS2 278 aa13.89□□□□□ -0.19
NEIL1-220ENST00000568881 CNTNAP3BQ96NU0 1288 aa13.89□□□□□ -0.19
NEIL1-220ENST00000568881 OLFM3Q96PB7 478 aa13.89□□□□□ -0.19
NEIL1-220ENST00000568881 LGMNQ99538 433 aa13.89□□□□□ -0.19
NEIL1-220ENST00000568881 FERMT1Q9BQL6 677 aa13.89□□□□□ -0.19
NEIL1-220ENST00000568881 HERPUD2Q9BSE4 406 aa13.89□□□□□ -0.19
NEIL1-220ENST00000568881 SLC17A9Q9BYT1 436 aa13.89□□□□□ -0.19
NEIL1-220ENST00000568881 CNTNAP3Q9BZ76 1288 aa13.89□□□□□ -0.19
NEIL1-220ENST00000568881 EBF2Q9HAK2 575 aa13.89□□□□□ -0.19
NEIL1-220ENST00000568881 APOBEC2Q9Y235 224 aaKnown RBP13.89□□□□□ -0.19
NEIL1-220ENST00000568881 FNDC3AQ9Y2H6 1198 aaKnown RBP13.89□□□□□ -0.19
NEIL1-220ENST00000568881 A0A1B0GTQ1 180 aa13.88□□□□□ -0.19
NEIL1-220ENST00000568881 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.88□□□□□ -0.19
NEIL1-220ENST00000568881 A0A1W2PQ67 120 aa13.88□□□□□ -0.19
NEIL1-220ENST00000568881 CTAGE9A4FU28 777 aa13.88□□□□□ -0.19
NEIL1-220ENST00000568881 A6NNZ2 444 aa13.88□□□□□ -0.19
NEIL1-220ENST00000568881 HACD1B0YJ81 288 aa13.88□□□□□ -0.19
NEIL1-220ENST00000568881 H0Y8X5 98 aa13.88□□□□□ -0.19
NEIL1-220ENST00000568881 RNF103O00237 685 aa13.88□□□□□ -0.19
NEIL1-220ENST00000568881 ATP1A1P05023 1023 aaKnown RBP13.88□□□□□ -0.19
NEIL1-220ENST00000568881 ITGAVP06756 1048 aa13.88□□□□□ -0.19
NEIL1-220ENST00000568881 CCNB1P14635 433 aa13.88□□□□□ -0.19
NEIL1-220ENST00000568881 GKP32189 559 aa13.88□□□□□ -0.19
NEIL1-220ENST00000568881 CXCR5P32302 372 aa13.88□□□□□ -0.19
NEIL1-220ENST00000568881 NXPH1P58417 271 aa13.88□□□□□ -0.19
NEIL1-220ENST00000568881 AP1S1P61966 158 aa13.88□□□□□ -0.19
NEIL1-220ENST00000568881 OTUD4Q01804 1114 aaKnown RBP13.88□□□□□ -0.19
NEIL1-220ENST00000568881 BCL2L1Q07817 233 aa13.88□□□□□ -0.19
NEIL1-220ENST00000568881 XRCC4Q13426 336 aa13.88□□□□□ -0.19
NEIL1-220ENST00000568881 CYTH1Q15438 398 aa13.88□□□□□ -0.19
NEIL1-220ENST00000568881 ZNF284Q2VY69 593 aa13.88□□□□□ -0.19
NEIL1-220ENST00000568881 TMEM259Q4ZIN3 620 aa13.88□□□□□ -0.19
NEIL1-220ENST00000568881 LAYNQ6UX15 382 aa13.88□□□□□ -0.19
NEIL1-220ENST00000568881 SLC13A5Q86YT5 568 aaPredicted RBP13.88□□□□□ -0.19
NEIL1-220ENST00000568881 ACTL9Q8TC94 416 aa13.88□□□□□ -0.19
NEIL1-220ENST00000568881 ASB12Q8WXK4 309 aa13.88□□□□□ -0.19
NEIL1-220ENST00000568881 EXOC2Q96KP1 924 aa13.88□□□□□ -0.19
NEIL1-220ENST00000568881 PSKH2Q96QS6 385 aa13.88□□□□□ -0.19
NEIL1-220ENST00000568881 NAPGQ99747 312 aaPredicted RBP13.88□□□□□ -0.19
NEIL1-220ENST00000568881 SUV39H2Q9H5I1 410 aa13.88□□□□□ -0.19
NEIL1-220ENST00000568881 IL21RQ9HBE5 538 aa13.88□□□□□ -0.19
NEIL1-220ENST00000568881 LHX3Q9UBR4 397 aa13.88□□□□□ -0.19
NEIL1-220ENST00000568881 HS3ST3A1Q9Y663 406 aa13.88□□□□□ -0.19
NEIL1-220ENST00000568881 ASCC3Q8N3C0 2202 aaKnown RBP13.88□□□□□ -0.19
NEIL1-220ENST00000568881 PLXNA2O75051 1894 aa13.88□□□□□ -0.19
NEIL1-220ENST00000568881 CNOT1A5YKK6 2376 aaKnown RBP13.88□□□□□ -0.19
NEIL1-220ENST00000568881 SPEGQ15772 3267 aa13.87□□□□□ -0.19
NEIL1-220ENST00000568881 H7C0C1 242 aa13.87□□□□□ -0.19
NEIL1-220ENST00000568881 FPGTO14772 594 aa13.87□□□□□ -0.19
NEIL1-220ENST00000568881 MTSS1O43312 755 aa13.87□□□□□ -0.19
NEIL1-220ENST00000568881 ZNF189O75820 626 aaPredicted RBP13.87□□□□□ -0.19
NEIL1-220ENST00000568881 WNT1P04628 370 aa13.87□□□□□ -0.19
NEIL1-220ENST00000568881 THEGLP0DJG4 465 aa13.87□□□□□ -0.19
NEIL1-220ENST00000568881 PRLRP16471 622 aa13.87□□□□□ -0.19
NEIL1-220ENST00000568881 TCP1P17987 556 aaKnown RBP13.87□□□□□ -0.19
NEIL1-220ENST00000568881 MMP13P45452 471 aa13.87□□□□□ -0.19
NEIL1-220ENST00000568881 ATP5OP48047 213 aa13.87□□□□□ -0.19
NEIL1-220ENST00000568881 EIF3EP60228 445 aaKnown RBP13.87□□□□□ -0.19
NEIL1-220ENST00000568881 ETF1P62495 437 aaKnown RBP13.87□□□□□ -0.19
NEIL1-220ENST00000568881 SLC10A7Q0GE19 358 aa13.87□□□□□ -0.19
NEIL1-220ENST00000568881 KLF1Q13351 362 aaPredicted RBP13.87□□□□□ -0.19
NEIL1-220ENST00000568881 NOMO1Q15155 1222 aa13.87□□□□□ -0.19
NEIL1-220ENST00000568881 RALGPS1Q5JS13 557 aa13.87□□□□□ -0.19
NEIL1-220ENST00000568881 SRLQ86TD4 932 aa13.87□□□□□ -0.19
NEIL1-220ENST00000568881 ZC3H18Q86VM9 953 aaKnown RBP13.87□□□□□ -0.19
NEIL1-220ENST00000568881 DENND6BQ8NEG7 585 aa13.87□□□□□ -0.19
NEIL1-220ENST00000568881 MAML1Q92585 1016 aa13.87□□□□□ -0.19
NEIL1-220ENST00000568881 KLK6Q92876 244 aa13.87□□□□□ -0.19
NEIL1-220ENST00000568881 LENG8Q96PV6 779 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms