RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 OR2T34Q8NGX1 318 aa16.85■□□□□ 0.29
COMMD4-224ENST00000568877 FEM1CQ96JP0 617 aa16.85■□□□□ 0.29
COMMD4-224ENST00000568877 MRGPRX2Q96LB1 330 aa16.85■□□□□ 0.29
COMMD4-224ENST00000568877 RUNDC3BQ96NL0 473 aa16.85■□□□□ 0.29
COMMD4-224ENST00000568877 ETNK1Q9HBU6 452 aa16.85■□□□□ 0.29
COMMD4-224ENST00000568877 PREBQ9HCU5 417 aa16.85■□□□□ 0.29
COMMD4-224ENST00000568877 PCDH12Q9NPG4 1184 aa16.85■□□□□ 0.29
COMMD4-224ENST00000568877 GOLGA6AQ9NYA3 693 aa16.85■□□□□ 0.29
COMMD4-224ENST00000568877 PPIL1Q9Y3C6 166 aa16.85■□□□□ 0.29
COMMD4-224ENST00000568877 NEU2Q9Y3R4 380 aa16.85■□□□□ 0.29
COMMD4-224ENST00000568877 WDFY4Q6ZS81 3184 aa16.85■□□□□ 0.29
COMMD4-224ENST00000568877 TBC1D3DA0A087WVF3 549 aa16.84■□□□□ 0.29
COMMD4-224ENST00000568877 TBC1D3IA0A087WXS9 549 aa16.84■□□□□ 0.29
COMMD4-224ENST00000568877 TBC1D3EA0A087X179 549 aa16.84■□□□□ 0.29
COMMD4-224ENST00000568877 TBC1D3KA0A087X1G2 549 aa16.84■□□□□ 0.29
COMMD4-224ENST00000568877 LOC285095A0A1B0GVY8 99 aa16.84■□□□□ 0.29
COMMD4-224ENST00000568877 TBC1D3FA6NER0 549 aaPredicted RBP16.84■□□□□ 0.29
COMMD4-224ENST00000568877 TBC1D3LB9A6J9 549 aa16.84■□□□□ 0.29
COMMD4-224ENST00000568877 NEMP1O14524 444 aa16.84■□□□□ 0.29
COMMD4-224ENST00000568877 RIOK3O14730 519 aaKnown RBP16.84■□□□□ 0.29
COMMD4-224ENST00000568877 SPINT1O43278 529 aa16.84■□□□□ 0.29
COMMD4-224ENST00000568877 ECEL1O95672 775 aa16.84■□□□□ 0.29
COMMD4-224ENST00000568877 GAS8O95995 478 aa16.84■□□□□ 0.29
COMMD4-224ENST00000568877 EPOP01588 193 aa16.84■□□□□ 0.29
COMMD4-224ENST00000568877 KRT14P02533 472 aa16.84■□□□□ 0.29
COMMD4-224ENST00000568877 TBC1D3HP0C7X1 549 aa16.84■□□□□ 0.29
COMMD4-224ENST00000568877 NFKBIAP25963 317 aa16.84■□□□□ 0.29
COMMD4-224ENST00000568877 TNNT3P45378 269 aaPredicted RBP16.84■□□□□ 0.29
COMMD4-224ENST00000568877 ELP6Q0PNE2 266 aa16.84■□□□□ 0.29
COMMD4-224ENST00000568877 SIM2Q14190 667 aaPredicted RBP16.84■□□□□ 0.29
COMMD4-224ENST00000568877 TRIP13Q15645 432 aaPredicted RBP16.84■□□□□ 0.29
COMMD4-224ENST00000568877 KCTD19Q17RG1 926 aaPredicted RBP16.84■□□□□ 0.29
COMMD4-224ENST00000568877 TBC1D3GQ6DHY5 549 aa16.84■□□□□ 0.29
COMMD4-224ENST00000568877 TBC1D3CQ6IPX1 549 aa16.84■□□□□ 0.29
COMMD4-224ENST00000568877 CCDC70Q6NSX1 233 aa16.84■□□□□ 0.29
COMMD4-224ENST00000568877 LPCAT2Q7L5N7 544 aa16.84■□□□□ 0.29
COMMD4-224ENST00000568877 ZNF572Q7Z3I7 529 aaPredicted RBP16.84■□□□□ 0.29
COMMD4-224ENST00000568877 TBC1D3Q8IZP1 549 aaPredicted RBP16.84■□□□□ 0.29
COMMD4-224ENST00000568877 CADM4Q8NFZ8 388 aa16.84■□□□□ 0.29
COMMD4-224ENST00000568877 ATOH1Q92858 354 aaPredicted RBP16.84■□□□□ 0.29
COMMD4-224ENST00000568877 SLCO2A1Q92959 643 aa16.84■□□□□ 0.29
COMMD4-224ENST00000568877 PCED1AQ9H1Q7 454 aa16.84■□□□□ 0.29
COMMD4-224ENST00000568877 C6orf106Q9H6K1 298 aaPredicted RBP16.84■□□□□ 0.29
COMMD4-224ENST00000568877 RAB6BQ9NRW1 208 aa16.84■□□□□ 0.29
COMMD4-224ENST00000568877 ITM2BQ9Y287 266 aa16.84■□□□□ 0.29
COMMD4-224ENST00000568877 HCN4Q9Y3Q4 1203 aa16.84■□□□□ 0.29
COMMD4-224ENST00000568877 MRFAP1Q9Y605 127 aa16.84■□□□□ 0.29
COMMD4-224ENST00000568877 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.83■□□□□ 0.28
COMMD4-224ENST00000568877 A0A0J9YYE9 177 aa16.83■□□□□ 0.28
COMMD4-224ENST00000568877 PRR23AA6NEV1 266 aa16.83■□□□□ 0.28
COMMD4-224ENST00000568877 ANKRD66B4E2M5 251 aa16.83■□□□□ 0.28
COMMD4-224ENST00000568877 PSMD3O43242 534 aa16.83■□□□□ 0.28
COMMD4-224ENST00000568877 TSPAN6O43657 245 aa16.83■□□□□ 0.28
COMMD4-224ENST00000568877 RNGTTO60942 597 aaKnown RBP16.83■□□□□ 0.28
COMMD4-224ENST00000568877 PCDH8O95206 1070 aa16.83■□□□□ 0.28
COMMD4-224ENST00000568877 NDST3O95803 873 aa16.83■□□□□ 0.28
COMMD4-224ENST00000568877 TRBC1P01850 177 aa16.83■□□□□ 0.28
COMMD4-224ENST00000568877 CTPS1P17812 591 aa16.83■□□□□ 0.28
COMMD4-224ENST00000568877 PTGIRP43119 386 aa16.83■□□□□ 0.28
COMMD4-224ENST00000568877 GRIA4P48058 902 aa16.83■□□□□ 0.28
COMMD4-224ENST00000568877 FAM193AP78312 1265 aa16.83■□□□□ 0.28
COMMD4-224ENST00000568877 SEMA5AQ13591 1074 aa16.83■□□□□ 0.28
COMMD4-224ENST00000568877 GALNT3Q14435 633 aa16.83■□□□□ 0.28
COMMD4-224ENST00000568877 PPP1R7Q15435 360 aa16.83■□□□□ 0.28
COMMD4-224ENST00000568877 QPCTQ16769 361 aa16.83■□□□□ 0.28
COMMD4-224ENST00000568877 PLK5Q496M5 336 aa16.83■□□□□ 0.28
COMMD4-224ENST00000568877 TMEM52BQ4KMG9 183 aa16.83■□□□□ 0.28
COMMD4-224ENST00000568877 SPDYCQ5MJ68 293 aa16.83■□□□□ 0.28
COMMD4-224ENST00000568877 KCTD11Q693B1 232 aa16.83■□□□□ 0.28
COMMD4-224ENST00000568877 NEK5Q6P3R8 708 aa16.83■□□□□ 0.28
COMMD4-224ENST00000568877 USP45Q70EL2 814 aa16.83■□□□□ 0.28
COMMD4-224ENST00000568877 TMEFF1Q8IYR6 380 aa16.83■□□□□ 0.28
COMMD4-224ENST00000568877 DEFB119Q8N690 84 aa16.83■□□□□ 0.28
COMMD4-224ENST00000568877 RMDN1Q96DB5 314 aa16.83■□□□□ 0.28
COMMD4-224ENST00000568877 SCRN2Q96FV2 425 aa16.83■□□□□ 0.28
COMMD4-224ENST00000568877 ZC3H10Q96K80 434 aaKnown RBP16.83■□□□□ 0.28
COMMD4-224ENST00000568877 MCCC1Q96RQ3 725 aaPredicted RBP16.83■□□□□ 0.28
COMMD4-224ENST00000568877 KRT12Q99456 494 aa16.83■□□□□ 0.28
COMMD4-224ENST00000568877 FICDQ9BVA6 458 aa16.83■□□□□ 0.28
COMMD4-224ENST00000568877 FSD1LQ9BXM9 530 aa16.83■□□□□ 0.28
COMMD4-224ENST00000568877 DUSP15Q9H1R2 295 aaPredicted RBP16.83■□□□□ 0.28
COMMD4-224ENST00000568877 GGT7Q9UJ14 662 aa16.83■□□□□ 0.28
COMMD4-224ENST00000568877 METTL12A8MUP2 240 aa16.82■□□□□ 0.28
COMMD4-224ENST00000568877 C10orf142B7Z368 130 aa16.82■□□□□ 0.28
COMMD4-224ENST00000568877 RHOBTB1O94844 696 aa16.82■□□□□ 0.28
COMMD4-224ENST00000568877 AGTP01019 485 aa16.82■□□□□ 0.28
COMMD4-224ENST00000568877 ATXN1LP0C7T5 689 aaKnown RBP16.82■□□□□ 0.28
COMMD4-224ENST00000568877 ADRA1AP35348 466 aa16.82■□□□□ 0.28
COMMD4-224ENST00000568877 MMP12P39900 470 aa16.82■□□□□ 0.28
COMMD4-224ENST00000568877 DR1Q01658 176 aa16.82■□□□□ 0.28
COMMD4-224ENST00000568877 SEMG2Q02383 582 aa16.82■□□□□ 0.28
COMMD4-224ENST00000568877 C2orf54Q08AI8 447 aa16.82■□□□□ 0.28
COMMD4-224ENST00000568877 ELF2Q15723 593 aa16.82■□□□□ 0.28
COMMD4-224ENST00000568877 SLC1A5Q15758 541 aa16.82■□□□□ 0.28
COMMD4-224ENST00000568877 SIRPB2Q5JXA9 342 aa16.82■□□□□ 0.28
COMMD4-224ENST00000568877 PMS2CLQ68D20 193 aa16.82■□□□□ 0.28
COMMD4-224ENST00000568877 KIAA0895LQ68EN5 471 aa16.82■□□□□ 0.28
COMMD4-224ENST00000568877 RANBP10Q6VN20 620 aa16.82■□□□□ 0.28
COMMD4-224ENST00000568877 DPPA4Q7L190 304 aa16.82■□□□□ 0.28
COMMD4-224ENST00000568877 PDCD7Q8N8D1 485 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms