RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 PPANQ9NQ55 473 aaKnown RBP5.47□□□□□ -1.53
CAPN3-217ENST00000567817 A1CFQ9NQ94 594 aaKnown RBP5.47□□□□□ -1.53
CAPN3-217ENST00000567817 HOMER2Q9NSB8 354 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 INTS9Q9NV88 658 aaKnown RBP5.47□□□□□ -1.53
CAPN3-217ENST00000567817 DNAJC28Q9NX36 388 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 DDX56Q9NY93 547 aaKnown RBP5.47□□□□□ -1.53
CAPN3-217ENST00000567817 CYP39A1Q9NYL5 469 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 RBAKQ9NYW8 714 aaPredicted RBP5.47□□□□□ -1.53
CAPN3-217ENST00000567817 GRHL1Q9NZI5 618 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 ADAM22Q9P0K1 906 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 BCCIPQ9P287 314 aaKnown RBP eCLIP5.47□□□□□ -1.53
CAPN3-217ENST00000567817 WDR35Q9P2L0 1181 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 FETUBQ9UGM5 382 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 ASIC3Q9UHC3 531 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 TRPS1Q9UHF7 1281 aa5.47□□□□□ -1.53
CAPN3-217ENST00000567817 KMT2BQ9UMN6 2715 aaPredicted RBP5.47□□□□□ -1.53
CAPN3-217ENST00000567817 COL4A4P53420 1690 aaPredicted RBP5.47□□□□□ -1.53
CAPN3-217ENST00000567817 TPRP12270 2363 aaKnown RBP5.47□□□□□ -1.53
CAPN3-217ENST00000567817 A0A0B4J269 797 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 GOLGA8IPA6NC78 632 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 PRR23AA6NEV1 266 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 CFAP73A6NFT4 308 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 TMEM221A6NGB7 291 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 GOLGA8JA6NMD2 632 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 TMEM110-MUSTN1A8MSY1 372 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 PRR5-ARHGAP8B1AHC4 643 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 TISP43B9A030 160 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 M0R296 226 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 CLDN3O15551 220 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 MED7O43513 233 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 TOM1L1O75674 476 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 TTC4O95801 387 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 HLA-DRAP01903 254 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 WEE2P0C1S8 567 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 TSHRP16473 764 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 MAKP20794 623 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 CDH5P33151 784 aaPredicted RBP5.46□□□□□ -1.54
CAPN3-217ENST00000567817 NBL1P41271 181 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 MTNR1BP49286 362 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 ZNF132P52740 706 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 CCL23P55773 120 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 GSCP56915 257 aaPredicted RBP5.46□□□□□ -1.54
CAPN3-217ENST00000567817 NOMO3P69849 1222 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 NOP14P78316 857 aaKnown RBP5.46□□□□□ -1.54
CAPN3-217ENST00000567817 SLC25A3Q00325 362 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 KRT17Q04695 432 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 KLF1Q13351 362 aaPredicted RBP5.46□□□□□ -1.54
CAPN3-217ENST00000567817 ITGA7Q13683 1181 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 TFDP1Q14186 410 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 SLC29A2Q14542 456 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 MORF4L2Q15014 288 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 SIX1Q15475 284 aaPredicted RBP5.46□□□□□ -1.54
CAPN3-217ENST00000567817 SGSM1Q2NKQ1 1148 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 FNDC7Q5VTL7 733 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 MBNL2Q5VZF2 373 aaKnown RBP5.46□□□□□ -1.54
CAPN3-217ENST00000567817 ICE2Q659A1 982 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 IGFL4Q6B9Z1 124 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 SLC39A4Q6P5W5 647 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 RHBDF2Q6PJF5 856 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 METTL7BQ6UX53 244 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 RPAINQ86UA6 219 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 BRSK2Q8IWQ3 736 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 AMER2Q8N7J2 671 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 NIPA2Q8N8Q9 360 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 TMEM35BQ8NCS4 154 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 OR7D4Q8NG98 312 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 RAPGEF5Q92565 580 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 CFAP57Q96MR6 1250 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 NCAPGQ9BPX3 1015 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 MSTO1Q9BUK6 570 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 OSBPL8Q9BZF1 889 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 TRIM31Q9BZY9 425 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 IKZF4Q9H2S9 585 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 AZI2Q9H6S1 392 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 BCO1Q9HAY6 547 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 POLD4Q9HCU8 107 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 ERVK-5Q9HDB9 667 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 XPNPEP1Q9NQW7 623 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 LGALS13Q9UHV8 139 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 DRG1Q9Y295 367 aaKnown RBP5.46□□□□□ -1.54
CAPN3-217ENST00000567817 Q9Y3F1 56 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 BAHCC1Q9P281 2608 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 SMCHD1A6NHR9 2005 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 TECTAO75443 2155 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 ACACBO00763 2458 aa5.46□□□□□ -1.54
CAPN3-217ENST00000567817 ATRXP46100 2492 aa5.45□□□□□ -1.54
CAPN3-217ENST00000567817 CHUKO15111 745 aa5.45□□□□□ -1.54
CAPN3-217ENST00000567817 CAND2O75155 1236 aa5.45□□□□□ -1.54
CAPN3-217ENST00000567817 ZNF189O75820 626 aaPredicted RBP5.45□□□□□ -1.54
CAPN3-217ENST00000567817 RECQL4O94761 1208 aa5.45□□□□□ -1.54
CAPN3-217ENST00000567817 SUN1O94901 812 aa5.45□□□□□ -1.54
CAPN3-217ENST00000567817 IL18RAPO95256 599 aa5.45□□□□□ -1.54
CAPN3-217ENST00000567817 ASS1P00966 412 aaKnown RBP5.45□□□□□ -1.54
CAPN3-217ENST00000567817 SLPIP03973 132 aa5.45□□□□□ -1.54
CAPN3-217ENST00000567817 ADH4P08319 380 aa5.45□□□□□ -1.54
CAPN3-217ENST00000567817 KRT7P08729 469 aa5.45□□□□□ -1.54
CAPN3-217ENST00000567817 P4HA1P13674 534 aa5.45□□□□□ -1.54
CAPN3-217ENST00000567817 CHN1P15882 459 aa5.45□□□□□ -1.54
CAPN3-217ENST00000567817 DESP17661 470 aa5.45□□□□□ -1.54
CAPN3-217ENST00000567817 MMP8P22894 467 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms