RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 NFATC4Q14934 902 aa18.76■□□□□ 0.59
LINC01238-205ENST00000567549 ASIC2Q16515 512 aa18.76■□□□□ 0.59
LINC01238-205ENST00000567549 WDR36Q8NI36 951 aaKnown RBP18.76■□□□□ 0.59
LINC01238-205ENST00000567549 LRRC19Q9H756 370 aa18.76■□□□□ 0.59
LINC01238-205ENST00000567549 KLQ9UEF7 1012 aa18.76■□□□□ 0.59
LINC01238-205ENST00000567549 KLF15Q9UIH9 416 aa18.76■□□□□ 0.59
LINC01238-205ENST00000567549 U3KQA8 63 aa18.76■□□□□ 0.59
LINC01238-205ENST00000567549 FASNP49327 2511 aaKnown RBP18.76■□□□□ 0.59
LINC01238-205ENST00000567549 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.75■□□□□ 0.59
LINC01238-205ENST00000567549 CACNB4O00305 520 aaPredicted RBP18.75■□□□□ 0.59
LINC01238-205ENST00000567549 ZW10O43264 779 aa18.75■□□□□ 0.59
LINC01238-205ENST00000567549 PIGNO95427 931 aa18.75■□□□□ 0.59
LINC01238-205ENST00000567549 TNFP01375 233 aa18.75■□□□□ 0.59
LINC01238-205ENST00000567549 C6P13671 934 aa18.75■□□□□ 0.59
LINC01238-205ENST00000567549 TSHRP16473 764 aa18.75■□□□□ 0.59
LINC01238-205ENST00000567549 TGM2P21980 687 aa18.75■□□□□ 0.59
LINC01238-205ENST00000567549 HSPA9P38646 679 aaKnown RBP18.75■□□□□ 0.59
LINC01238-205ENST00000567549 HCAR3P49019 387 aa18.75■□□□□ 0.59
LINC01238-205ENST00000567549 AP1S1P61966 158 aa18.75■□□□□ 0.59
LINC01238-205ENST00000567549 CXADRP78310 365 aa18.75■□□□□ 0.59
LINC01238-205ENST00000567549 RHDQ02161 417 aa18.75■□□□□ 0.59
LINC01238-205ENST00000567549 MAMLD1Q13495 774 aa18.75■□□□□ 0.59
LINC01238-205ENST00000567549 CYTH1Q15438 398 aa18.75■□□□□ 0.59
LINC01238-205ENST00000567549 TSR1Q2NL82 804 aaKnown RBP18.75■□□□□ 0.59
LINC01238-205ENST00000567549 C3orf38Q5JPI3 329 aa18.75■□□□□ 0.59
LINC01238-205ENST00000567549 PLEKHA7Q6IQ23 1121 aa18.75■□□□□ 0.59
LINC01238-205ENST00000567549 RFX8Q6ZV50 586 aa18.75■□□□□ 0.59
LINC01238-205ENST00000567549 SRLQ86TD4 932 aa18.75■□□□□ 0.59
LINC01238-205ENST00000567549 HID1Q8IV36 788 aa18.75■□□□□ 0.59
LINC01238-205ENST00000567549 RBFAQ8N0V3 343 aa18.75■□□□□ 0.59
LINC01238-205ENST00000567549 AOPEPQ8N6M6 819 aa18.75■□□□□ 0.59
LINC01238-205ENST00000567549 NSMCE1Q8WV22 266 aa18.75■□□□□ 0.59
LINC01238-205ENST00000567549 SLC39A7Q92504 469 aa18.75■□□□□ 0.59
LINC01238-205ENST00000567549 HIC2Q96JB3 615 aa18.75■□□□□ 0.59
LINC01238-205ENST00000567549 EXOC2Q96KP1 924 aa18.75■□□□□ 0.59
LINC01238-205ENST00000567549 WDR92Q96MX6 357 aa18.75■□□□□ 0.59
LINC01238-205ENST00000567549 BPIFA3Q9BQP9 254 aa18.75■□□□□ 0.59
LINC01238-205ENST00000567549 MAGEB5Q9BZ81 275 aa18.75■□□□□ 0.59
LINC01238-205ENST00000567549 EDEM3Q9BZQ6 932 aa18.75■□□□□ 0.59
LINC01238-205ENST00000567549 STRADBQ9C0K7 418 aa18.75■□□□□ 0.59
LINC01238-205ENST00000567549 PDFQ9HBH1 243 aa18.75■□□□□ 0.59
LINC01238-205ENST00000567549 PCDH12Q9NPG4 1184 aa18.75■□□□□ 0.59
LINC01238-205ENST00000567549 CCDC187A0A096LP49 1063 aa18.74■□□□□ 0.59
LINC01238-205ENST00000567549 YY2O15391 372 aa18.74■□□□□ 0.59
LINC01238-205ENST00000567549 ELFN1P0C7U0 828 aa18.74■□□□□ 0.59
LINC01238-205ENST00000567549 KRT10P13645 584 aa18.74■□□□□ 0.59
LINC01238-205ENST00000567549 MMP12P39900 470 aa18.74■□□□□ 0.59
LINC01238-205ENST00000567549 ARL4AP40617 200 aa18.74■□□□□ 0.59
LINC01238-205ENST00000567549 PAPOLAP51003 745 aaKnown RBP18.74■□□□□ 0.59
LINC01238-205ENST00000567549 SRP54P61011 504 aaKnown RBP18.74■□□□□ 0.59
LINC01238-205ENST00000567549 IL10RBQ08334 325 aa18.74■□□□□ 0.59
LINC01238-205ENST00000567549 C1orf61Q13536 156 aa18.74■□□□□ 0.59
LINC01238-205ENST00000567549 PEX6Q13608 980 aa18.74■□□□□ 0.59
LINC01238-205ENST00000567549 LRRC73Q5JTD7 316 aa18.74■□□□□ 0.59
LINC01238-205ENST00000567549 ENPP7Q6UWV6 458 aa18.74■□□□□ 0.59
LINC01238-205ENST00000567549 IRF2BP2Q7Z5L9 587 aa18.74■□□□□ 0.59
LINC01238-205ENST00000567549 SLC35F3Q8IY50 421 aa18.74■□□□□ 0.59
LINC01238-205ENST00000567549 ZNF599Q96NL3 588 aa18.74■□□□□ 0.59
LINC01238-205ENST00000567549 APOOQ9BUR5 198 aa18.74■□□□□ 0.59
LINC01238-205ENST00000567549 KLC2Q9H0B6 622 aa18.74■□□□□ 0.59
LINC01238-205ENST00000567549 MBNL1Q9NR56 388 aaKnown RBP18.74■□□□□ 0.59
LINC01238-205ENST00000567549 HAUS2Q9NVX0 235 aa18.74■□□□□ 0.59
LINC01238-205ENST00000567549 SEPT3Q9UH03 358 aa18.74■□□□□ 0.59
LINC01238-205ENST00000567549 SATB2Q9UPW6 733 aa18.74■□□□□ 0.59
LINC01238-205ENST00000567549 IGSF10Q6WRI0 2623 aa18.74■□□□□ 0.59
LINC01238-205ENST00000567549 PTPRQQ9UMZ3 2332 aa18.74■□□□□ 0.59
LINC01238-205ENST00000567549 LAMA5O15230 3695 aa18.73■□□□□ 0.59
LINC01238-205ENST00000567549 H3BRJ5 948 aa18.73■□□□□ 0.59
LINC01238-205ENST00000567549 ERVH48-1M5A8F1 160 aa18.73■□□□□ 0.59
LINC01238-205ENST00000567549 GCATO75600 419 aa18.73■□□□□ 0.59
LINC01238-205ENST00000567549 LIG3P49916 1009 aa18.73■□□□□ 0.59
LINC01238-205ENST00000567549 TPM4P67936 248 aa18.73■□□□□ 0.59
LINC01238-205ENST00000567549 TYRO3Q06418 890 aa18.73■□□□□ 0.59
LINC01238-205ENST00000567549 INPP5AQ14642 412 aa18.73■□□□□ 0.59
LINC01238-205ENST00000567549 WSCD2Q2TBF2 565 aa18.73■□□□□ 0.59
LINC01238-205ENST00000567549 PPP6R3Q5H9R7 873 aaPredicted RBP18.73■□□□□ 0.59
LINC01238-205ENST00000567549 WBP1Q96G27 269 aa18.73■□□□□ 0.59
LINC01238-205ENST00000567549 TMEM74Q96NL1 305 aa18.73■□□□□ 0.59
LINC01238-205ENST00000567549 CCDC3Q9BQI4 270 aa18.73■□□□□ 0.59
LINC01238-205ENST00000567549 SNRNP25Q9BV90 132 aaKnown RBP18.73■□□□□ 0.59
LINC01238-205ENST00000567549 SYNDIG1Q9H7V2 258 aa18.73■□□□□ 0.59
LINC01238-205ENST00000567549 RTN4Q9NQC3 1192 aaKnown RBP18.73■□□□□ 0.59
LINC01238-205ENST00000567549 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.73■□□□□ 0.59
LINC01238-205ENST00000567549 GULP1Q9UBP9 304 aa18.73■□□□□ 0.59
LINC01238-205ENST00000567549 GPR34Q9UPC5 381 aa18.73■□□□□ 0.59
LINC01238-205ENST00000567549 A0A1W2PQC6 194 aa18.72■□□□□ 0.59
LINC01238-205ENST00000567549 TMEM191CA6NGB0 347 aa18.72■□□□□ 0.59
LINC01238-205ENST00000567549 TMCO5BA8MYB1 307 aa18.72■□□□□ 0.59
LINC01238-205ENST00000567549 J3KR12 359 aa18.72■□□□□ 0.59
LINC01238-205ENST00000567549 DFFAO00273 331 aa18.72■□□□□ 0.59
LINC01238-205ENST00000567549 HOXC4P09017 264 aaPredicted RBP18.72■□□□□ 0.59
LINC01238-205ENST00000567549 MYF5P13349 255 aa18.72■□□□□ 0.59
LINC01238-205ENST00000567549 ERCC2P18074 760 aa18.72■□□□□ 0.59
LINC01238-205ENST00000567549 SERPINB6P35237 376 aa18.72■□□□□ 0.59
LINC01238-205ENST00000567549 KIAA1024LP59773 190 aa18.72■□□□□ 0.59
LINC01238-205ENST00000567549 KLHL30Q0D2K2 578 aa18.72■□□□□ 0.59
LINC01238-205ENST00000567549 ZNF235Q14590 738 aa18.72■□□□□ 0.59
LINC01238-205ENST00000567549 NCAPHQ15003 741 aa18.72■□□□□ 0.59
LINC01238-205ENST00000567549 TPRG1LQ5T0D9 272 aa18.72■□□□□ 0.59
LINC01238-205ENST00000567549 RD3Q7Z3Z2 195 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms